mRNA_H-elongata_contig87066.16255.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig87066.16255.1 vs. uniprot
Match: D7G2H9_ECTSI (Arginine biosynthesis bifunctional protein ArgJ, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H9_ECTSI) HSP 1 Score: 311 bits (796), Expect = 1.080e-101 Identity = 163/207 (78.74%), Postives = 183/207 (88.41%), Query Frame = 1
Query: 1 ASVKASMQSESLFPAAVSIMTTDRYPKLRGTQVGANGGRLVGIAKGAGMIEPNMATMLAYIVTDLQIPPQKMRDLLSKKADASFNCITIHSDTSTSPSRDTVVLLSSGKVPLADGDLEDFEKKLEAVCAGLAEDVVRNGEGTGHVMEVRVSGAPTSDMARRLGKAVVNSPLFKSAIAGNDPNVGRLLAVVGRFMATEAPRTEVSNTR 621
A VKA MQS SL+PA SIMTTDRYPK+RGT+VG+NGGRLVGIAKGAGMIEP+MATML Y+VTDLQIP +KMR+LLSKK+DASFNCI+I SDTSTS DTV+LLSSGKVPLA+GDLEDFE+KLEAVC GLAEDVVRNGEGT HVM+ V+GAPTS +AR+LGK VVNSPLFK A GNDPNVGRLLAVVGR M ++P T+VSNTR
Sbjct: 220 APVKAKMQSASLYPACKSIMTTDRYPKMRGTEVGSNGGRLVGIAKGAGMIEPDMATMLVYLVTDLQIPREKMRELLSKKSDASFNCISIDSDTSTS---DTVLLLSSGKVPLAEGDLEDFEEKLEAVCDGLAEDVVRNGEGTAHVMQGHVTGAPTSALARKLGKGVVNSPLFKGAGGGNDPNVGRLLAVVGRVMGKKSPDTDVSNTR 423
BLAST of mRNA_H-elongata_contig87066.16255.1 vs. uniprot
Match: A0A835Z9Q2_9STRA (Arginine biosynthesis bifunctional protein ArgJ, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q2_9STRA) HSP 1 Score: 259 bits (661), Expect = 3.830e-81 Identity = 139/205 (67.80%), Postives = 159/205 (77.56%), Query Frame = 1
Query: 7 VKASMQSESLFPAAVSIMTTDRYPKLRGTQVGANGGRLVGIAKGAGMIEPNMATMLAYIVTDLQIPPQKMRDLLSKKADASFNCITIHSDTSTSPSRDTVVLLSSGKVPLADGDLEDFEKKLEAVCAGLAEDVVRNGEGTGHVMEVRVSGAPTSDMARRLGKAVVNSPLFKSAIAGNDPNVGRLLAVVGRFMATEAPRTEVSNTR 621
V+ +Q +SL PAA SIMTTDRYPKLRG +VGA G +VGIAKGAGMIEPNMATML YI+TDL +P ++ LL K DASFNCI++ SDTSTS DTVVL+SSGKV +GDLE F LE+VC GLA+DVVRNGEGT HVMEV V GAP+ ARR+GK VVNSPLFK A+AGNDPNVGRLLAVVGR M P ++S TR
Sbjct: 209 VQGRIQRDSLAPAARSIMTTDRYPKLRGCRVGATGASVVGIAKGAGMIEPNMATMLVYILTDLDVPRSALQSLLRAKVDASFNCISVDSDTSTS---DTVVLVSSGKVAAREGDLEAFGAALESVCKGLAQDVVRNGEGTTHVMEVLVKGAPSDATARRVGKEVVNSPLFKCAVAGNDPNVGRLLAVVGRVMGVLDPAADLSRTR 410
BLAST of mRNA_H-elongata_contig87066.16255.1 vs. uniprot
Match: A0A7S0LID0_9EUKA (Arginine biosynthesis bifunctional protein ArgJ, mitochondrial n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LID0_9EUKA) HSP 1 Score: 216 bits (549), Expect = 1.800e-65 Identity = 117/201 (58.21%), Postives = 150/201 (74.63%), Query Frame = 1
Query: 19 MQSESLFPAAVSIMTTDRYPKLRGTQVGANGGRLVGIAKGAGMIEPNMATMLAYIVTDLQIPPQKMRDLLSKKADASFNCITIHSDTSTSPSRDTVVLLSSGKVPL-ADGDLE---DFEKKLEAVCAGLAEDVVRNGEGTGHVMEVRVSGAPTSDMARRLGKAVVNSPLFKSAIAGNDPNVGRLLAVVGRFMATEAPRTEV 609
+Q +SL PAA IMTTDRYPKLR + A GGRLVGIAKGAGMIEPNMATML++I+TDL +P +++ +L+ AD+SFNC+++ +D STS DT+V +SS PL A D E +FE L +C L+ DV RNGEGT HV+ VRVSG+PT ++AR +GKAVVNSPLFK+A+AGNDPNVGRL+ VG ++ AP E+
Sbjct: 112 LQRDSLLPAAKGIMTTDRYPKLRSVE--ACGGRLVGIAKGAGMIEPNMATMLSFILTDLDVPRSELQRMLAAAADSSFNCMSVDADQSTS---DTLVCISSATTPLKASRDQEALAEFEGALRQLCEELSGDVARNGEGTSHVIRVRVSGSPTREIARGVGKAVVNSPLFKTAVAGNDPNVGRLVGAVGSYLGRAAPELEL 307
BLAST of mRNA_H-elongata_contig87066.16255.1 vs. uniprot
Match: A0A7S3T4G0_9SPIT (Arginine biosynthesis bifunctional protein ArgJ, mitochondrial n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T4G0_9SPIT) HSP 1 Score: 217 bits (553), Expect = 3.760e-65 Identity = 118/212 (55.66%), Postives = 154/212 (72.64%), Query Frame = 1
Query: 4 SVKASMQSESLFPAAVSIMTTDRYPKLRGTQVGANGGRLVGIAKGAGMIEPNMATMLAYIVTDLQIPPQKMRDLLSKKADASFNCITIHSDTSTSPSRDTVVLLSSGKVPLADGD--LEDFEKKLEAVCAGLAEDVVRNGEGTGHVMEVRVSGAPTSDMARRLGKAVVNSPLFKSAIAGNDPNVGRLLAVVGRFMATEAPRTEVSN-TRRVG 630
S A++Q +++ PAA +IMTTDRYPKLR +V GG +VGIAKGAGMIEPNMATML +I+TD+ +P +++ +LS AD +FNC++I D STS DTVV+LSS PL GD L++F L AVCA LA D+ RNGEGT HVM + V G+PT D+AR +GKAVVNSPL K+AIAGNDPNVGR++ VG ++ +P ++S T +G
Sbjct: 198 SALAALQRDTMLPAARAIMTTDRYPKLRRAEV--CGGTIVGIAKGAGMIEPNMATMLCFILTDIDVPKAELQKMLSSSADETFNCMSIDGDQSTS---DTVVVLSSQMKPLPSGDAALKEFAAGLRAVCADLAADITRNGEGTAHVMRIAVKGSPTFDLARGVGKAVVNSPLVKTAIAGNDPNVGRIVGAVGSYLGKVSPDLDLSKCTMNIG 404
BLAST of mRNA_H-elongata_contig87066.16255.1 vs. uniprot
Match: UPI0019BA619A (Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=UPI0019BA619A) HSP 1 Score: 213 bits (542), Expect = 5.590e-65 Identity = 119/203 (58.62%), Postives = 145/203 (71.43%), Query Frame = 1
Query: 13 ASMQSESLFPAAVSIMTTDRYPKLRGTQVGANGGRLVGIAKGAGMIEPNMATMLAYIVTDLQIPPQKMRDLLSKKADASFNCITIHSDTSTSPSRDTVVLLSSGKVPLADGDLEDFEKKLEAVCAGLAEDVVRNGEGTGHVMEVRVSGAPTSDMARRLGKAVVNSPLFKSAIAGNDPNVGRLLAVVGRFMATEAPRTEVSNTR 621
A++ + S+ PAA I+TTD YPK+R VGA GR+VGIAKGAGMIEPNMATML YI+TDL +P +R LL+K +ASFN I+I SDTSTS DTV L+SSG VP DL FE L VC LAEDVVRNGEG HV+ V V+ A T +A LGKA+VN+PLFK A+AGNDPNVGRL+ +G+ + AP T++S R
Sbjct: 62 AALAAGSIMPAAEGIVTTDLYPKVRSAAVGA--GRIVGIAKGAGMIEPNMATMLVYILTDLAVPRDTLRALLTKTVNASFNRISIDSDTSTS---DTVALVSSGLVPC--DDLAAFESALALVCRDLAEDVVRNGEGVRHVIRVEVTNAATPSLAVALGKAIVNAPLFKCAVAGNDPNVGRLVQAIGKHVGAHAPETDLSKLR 257
BLAST of mRNA_H-elongata_contig87066.16255.1 vs. uniprot
Match: A0A2A2RID4_9BACT (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Opitutae bacterium Tous-C8FEB TaxID=1982323 RepID=A0A2A2RID4_9BACT) HSP 1 Score: 216 bits (549), Expect = 5.610e-65 Identity = 118/199 (59.30%), Postives = 145/199 (72.86%), Query Frame = 1
Query: 31 SLFPAAVSIMTTDRYPKLRGTQVGANGGRLVGIAKGAGMIEPNMATMLAYIVTDLQIPPQKMRDLLSKKADASFNCITIHSDTSTSPSRDTVVLLSSGKVPLADGDLEDFEKKLEAVCAGLAEDVVRNGEGTGHVMEVRVSGAPTSDMARRLGKAVVNSPLFKSAIAGNDPNVGRLLAVVGRFMATEAPRTEVSNTRRV 627
S+ PAA I+TTD YPK+R +VG GG +VGIAKGAGMIEPN+ATML YI+TD+ +P ++R +L++ ADASFN I+I SDTSTS DTVV LSSG+VP AD FE+ L VC LAEDVVRNGEG HV+ V V A + +AR LGKAVVN PLFK A+AGNDPNVGRL+ +G+ + AP T++S R V
Sbjct: 159 SILPAAEGIVTTDLYPKVRRAEVG--GGSIVGIAKGAGMIEPNLATMLVYILTDIAVPRAELRQMLARAADASFNAISIDSDTSTS---DTVVALSSGRVPFADWGA--FERALHQVCRDLAEDVVRNGEGVRHVIRVTVREAASLGLARALGKAVVNGPLFKCAVAGNDPNVGRLIQAIGKHVGAHAPGTDLSRLRAV 350
BLAST of mRNA_H-elongata_contig87066.16255.1 vs. uniprot
Match: A0A178IAJ7_9BACT (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Opitutaceae bacterium TSB47 TaxID=1184151 RepID=A0A178IAJ7_9BACT) HSP 1 Score: 216 bits (549), Expect = 6.050e-65 Identity = 117/203 (57.64%), Postives = 144/203 (70.94%), Query Frame = 1
Query: 13 ASMQSESLFPAAVSIMTTDRYPKLRGTQVGANGGRLVGIAKGAGMIEPNMATMLAYIVTDLQIPPQKMRDLLSKKADASFNCITIHSDTSTSPSRDTVVLLSSGKVPLADGDLEDFEKKLEAVCAGLAEDVVRNGEGTGHVMEVRVSGAPTSDMARRLGKAVVNSPLFKSAIAGNDPNVGRLLAVVGRFMATEAPRTEVSNTR 621
A++ + S+ PAA I+TTD YPK+R VG G +VGIAKGAGMIEPN+ATML Y++TDL +P +R +L++ D SFN I+I SDTSTS DTVVLLSSGK+P A D FE L VC LAEDVVRNGEG HV+ VRV+GAP AR LGKAVVN+PLFK A+AGNDPNVGRL+ +G+ + AP ++ R
Sbjct: 153 AALSAGSVLPAAEGIVTTDLYPKIRRAAVGRTGASIVGIAKGAGMIEPNLATMLVYVLTDLAVPRDTLRAMLARVVDDSFNTISIDSDTSTS---DTVVLLSSGKIPAA-ADHAAFETALAQVCRDLAEDVVRNGEGVRHVIRVRVAGAPDRATARALGKAVVNAPLFKCAVAGNDPNVGRLVQAIGKHVGAHAPGLDLGRLR 351
BLAST of mRNA_H-elongata_contig87066.16255.1 vs. uniprot
Match: A0A2U8E6L4_9BACT (Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=Ereboglobus luteus TaxID=1796921 RepID=A0A2U8E6L4_9BACT) HSP 1 Score: 214 bits (545), Expect = 2.330e-64 Identity = 117/200 (58.50%), Postives = 141/200 (70.50%), Query Frame = 1
Query: 13 ASMQSESLFPAAVSIMTTDRYPKLRGTQVGANGGRLVGIAKGAGMIEPNMATMLAYIVTDLQIPPQKMRDLLSKKADASFNCITIHSDTSTSPSRDTVVLLSSGKVPLADGDLEDFEKKLEAVCAGLAEDVVRNGEGTGHVMEVRVSGAPTSDMARRLGKAVVNSPLFKSAIAGNDPNVGRLLAVVGRFMATEAPRTEVS 612
A++ +S+ PAA I+TTD YPK+R VGA G +VGIAKGAGMIEPNMATML YI+TDL +P +R +L++ D+SFN I+I SDTSTS DTV L+SSGKVP G FE L VC LAEDVVRNGEG HVM V V GA + AR LGKA+VN+PLFK A+AGNDPNVGRL+ VG+ + P +VS
Sbjct: 153 AALSGDSILPAAEGIVTTDLYPKIRRASVGA--GSIVGIAKGAGMIEPNMATMLVYILTDLAVPRDTLRAMLARAVDSSFNTISIDSDTSTS---DTVALVSSGKVPCEPGQYAAFEAALAQVCRDLAEDVVRNGEGVRHVMRVIVKGASDLETARALGKAIVNAPLFKCAVAGNDPNVGRLVQAVGKHVGAHMPSLDVS 347
BLAST of mRNA_H-elongata_contig87066.16255.1 vs. uniprot
Match: A0A290Q6Z9_9BACT (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Nibricoccus aquaticus TaxID=2576891 RepID=A0A290Q6Z9_9BACT) HSP 1 Score: 213 bits (542), Expect = 6.240e-64 Identity = 116/207 (56.04%), Postives = 150/207 (72.46%), Query Frame = 1
Query: 13 ASMQSESLFPAAVSIMTTDRYPKLRGTQVGANGGRLVGIAKGAGMIEPNMATMLAYIVTDLQIPPQKMRDLLSKKADASFNCITIHSDTSTSPSRDTVVLLSSGKVPLADGDLEDFEKKLEAVCAGLAEDVVRNGEGTGHVMEVRVSGAPTSDMARRLGKAVVNSPLFKSAIAGNDPNVGRLLAVVGRFMATEAPRTEVSN-TRRVG 630
AS+ + S+ PAA I+TTD YPK+R +G GG +VGIAKGAGMIEPN+ATML YI+TD+ IP ++R +L++ D SFN I+I SDTSTS DTV L+SS KVP + D FEK L VC LAEDVVRNGEG HV+ V V GAP+ +++R LGKA+VN+PLFK A+AGNDPNVGRL+ +G+ + AP ++S + R+G
Sbjct: 153 ASLTASSILPAAEGIVTTDLYPKIRRADLG--GGSIVGIAKGAGMIEPNLATMLVYILTDIAIPRAELRTMLARAVDVSFNTISIDSDTSTS---DTVALVSSSKVPCS--DKAAFEKALTQVCRDLAEDVVRNGEGVRHVIRVNVKGAPSREISRALGKAIVNAPLFKCAVAGNDPNVGRLVQAIGKHVGAHAPGLDLSRLSARIG 352
BLAST of mRNA_H-elongata_contig87066.16255.1 vs. uniprot
Match: A0A2D4BSP9_PYTIN (Glutamate N-acetyltransferase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSP9_PYTIN) HSP 1 Score: 208 bits (529), Expect = 1.100e-63 Identity = 111/205 (54.15%), Postives = 145/205 (70.73%), Query Frame = 1
Query: 16 SMQSESLFPAAVSIMTTDRYPKLRGTQVGANGGRLVGIAKGAGMIEPNMATMLAYIVTDLQIPPQKMRDLLSKKADASFNCITIHSDTSTSPSRDTVVLLSSGKVPLADGD-LEDFEKKLEAVCAGLAEDVVRNGEGTGHVMEVRVSGAPTSDMARRLGKAVVNSPLFKSAIAGNDPNVGRLLAVVGRFMATEAPRTEVSNTRRV 627
S+QSES+ P A IMTTD YPK+R V GGR+VG+AKGAGMIEPNMATMLAY++TDL +P + +R LL + D +FN ++I +D STS DTV ++SSG++P + LE F + L VC GL ED+VRNGEG HVM V V GA + MA+ +GK+VVNSPL K A+AGNDPNVGRL+ VG++M P +++ R+
Sbjct: 8 SLQSESVLPVAEGIMTTDLYPKVRSADVA--GGRIVGVAKGAGMIEPNMATMLAYVLTDLAVPRETLRRLLREVVDDTFNAMSIDTDQSTS---DTVAIVSSGELPFDEAAALEPFRRALHEVCRGLCEDIVRNGEGAQHVMRVVVRGAASRAMAQGVGKSVVNSPLLKCAVAGNDPNVGRLVMAVGKYMGRHHPTLDITRRMRI 207 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87066.16255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig87066.16255.1 >prot_H-elongata_contig87066.16255.1 ID=prot_H-elongata_contig87066.16255.1|Name=mRNA_H-elongata_contig87066.16255.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp MQSESLFPAAVSIMTTDRYPKLRGTQVGANGGRLVGIAKGAGMIEPNMATback to top mRNA from alignment at H-elongata_contig87066:251..2681- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig87066.16255.1 ID=mRNA_H-elongata_contig87066.16255.1|Name=mRNA_H-elongata_contig87066.16255.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2431bp|location=Sequence derived from alignment at H-elongata_contig87066:251..2681- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig87066:251..2681- >mRNA_H-elongata_contig87066.16255.1 ID=mRNA_H-elongata_contig87066.16255.1|Name=mRNA_H-elongata_contig87066.16255.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1230bp|location=Sequence derived from alignment at H-elongata_contig87066:251..2681- (Himanthalia elongata Himel1 dioecious)back to top |