mRNA_H-elongata_contig87060.16254.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig87060.16254.1
Unique NamemRNA_H-elongata_contig87060.16254.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: A0A6H5LCT9_9PHAE (TTC5_OB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCT9_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 5.620e-83
Identity = 128/173 (73.99%), Postives = 146/173 (84.39%), Query Frame = 1
Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAES-SDVKRNPDLFFNRAQVLQYRQDYPEAIRDYR 516
            RGRALDVF+ F+P AE+CLA+AVKLHPS+PDGWTALGHCYWKK DL  AKRCFL +L+K RK D+LRQLSMLLRQ+PGT +E  A +QESLR AKEAV LD G GDSWYVLGN YV SFFR + G+KDLDRALQAYK+AE+    + NPDLFFNRAQV QYR+DYPE+IRD R
Sbjct:  175 RGRALDVFTKFNPAAEKCLAKAVKLHPSDPDGWTALGHCYWKKPDLFAAKRCFLTSLEKARKADTLRQLSMLLRQMPGTAEEKGAQVQESLRFAKEAVTLDIGCGDSWYVLGNGYVASFFRSSRGIKDLDRALQAYKKAEAYGGEEGNPDLFFNRAQVFQYREDYPESIRDLR 347          
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: D7G7M4_ECTSI (TTC5_OB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M4_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 6.950e-82
Identity = 126/173 (72.83%), Postives = 144/173 (83.24%), Query Frame = 1
Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAES-SDVKRNPDLFFNRAQVLQYRQDYPEAIRDYR 516
            RGRALDVF+ F+P AE+CLA+AVKLHPSEPDGWTAL HCYWKK DL  AKRCFL +L+K RK D+L+QLSMLLRQ+PGT +E  A L+ESLRLAKEAV LD   G SWYVLGN YV SFF  + G+KDLDRALQAYK+AE+    K NPDLFFNRAQV QYR+DYPE+IRD+R
Sbjct:   33 RGRALDVFTKFNPNAEKCLAKAVKLHPSEPDGWTALAHCYWKKPDLFAAKRCFLTSLEKARKADTLQQLSMLLRQMPGTAEEKGAQLEESLRLAKEAVTLDVECGYSWYVLGNGYVASFFGSSRGIKDLDRALQAYKKAEAYGGEKGNPDLFFNRAQVFQYREDYPESIRDFR 205          
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: T0S5G9_SAPDV (TTC5_OB domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S5G9_SAPDV)

HSP 1 Score: 179 bits (453), Expect = 1.710e-51
Identity = 86/171 (50.29%), Postives = 115/171 (67.25%), Query Frame = 1
Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 513
            +G+ALD F  +D  AE+ L++A KL P   D W ALG+C+WKK DLL AK CF   L+ G    +LR LSM+LR+L   P++ + H++ SL+ AK+AV LD   G+SWYVLGNAY+  FF  +    DLDR+L AY RAE +   +NPDL FNRA V +Y++DY EA+  Y
Sbjct:   70 KGKALDAFPSYDATAEQLLSQAAKLDPCNLDAWVALGNCFWKKGDLLVAKNCFENCLEYGSSKHALRSLSMVLRKLGTKPEDKADHVRASLQRAKQAVSLDLTDGESWYVLGNAYLALFFGDSHSTVDLDRSLAAYTRAEKAGAGQNPDLHFNRANVQRYKEDYAEAVASY 240          
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: A0A1V9YGG6_9STRA (TTC5_OB domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGG6_9STRA)

HSP 1 Score: 177 bits (448), Expect = 9.070e-51
Identity = 88/171 (51.46%), Postives = 113/171 (66.08%), Query Frame = 1
Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 513
            +G+ALD F  +D  AE+ L++A KL P   D W ALG+C WKK DLL AK CF   L+ G    +LR LSM+LR+L   P++   H++ SL+ AK+AV LD   G+SWYVLGNAY+  FF  T    DLDR+L AY RAE +   RNPDL FNRA V +Y++DY EA+  Y
Sbjct:   68 KGKALDAFPIYDATAEQLLSQAAKLDPCNLDTWVALGNCLWKKGDLLMAKNCFENCLEYGLSKHALRSLSMVLRKLGTRPEDKVHHVRMSLQHAKQAVSLDLADGESWYVLGNAYLALFFGDTHSTIDLDRSLAAYTRAEKAGAGRNPDLHFNRANVFRYKEDYAEAVTSY 238          
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: A0A067CIK2_SAPPC (TTC5_OB domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CIK2_SAPPC)

HSP 1 Score: 176 bits (445), Expect = 1.940e-50
Identity = 85/171 (49.71%), Postives = 115/171 (67.25%), Query Frame = 1
Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 513
            +G+ALD F  +D  AE+ L++A KL P   D W ALG+C+WKK DL+ AK CF   L+ G    +LR LSM+LR+L   P++ + H++ SL+ AK+AV LD   G+SWYVLGNAY+  FF  +    DLDR+L AY RAE +   +NPDL FNRA V +Y++DY EA+  Y
Sbjct:   70 KGKALDAFPSYDATAEQLLSQAAKLDPCNLDAWVALGNCFWKKGDLVLAKHCFENCLEYGSSKHALRSLSMVLRKLGTKPEDKADHVRASLQHAKQAVGLDLTDGESWYVLGNAYLALFFGDSHSTVDLDRSLAAYTRAEKAGAGQNPDLHFNRANVHRYKEDYAEAVASY 240          
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: A0A7S3UMN7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UMN7_HETAK)

HSP 1 Score: 160 bits (406), Expect = 1.560e-47
Identity = 79/154 (51.30%), Postives = 104/154 (67.53%), Query Frame = 1
Query:   40 EAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEA 501
            EAE  L +AVKL+P   D W  LGHC WKKKD L AK C+++AL++     SL++LSM+LRQ+PG  +    +L ESL  AK AV+LD     SWYVLGNA++T FF+ +    D+D+ALQAY+R+E      NPDLFFN+A VL Y++ Y  A
Sbjct:    2 EAEEHLQQAVKLNPDHLDSWNTLGHCLWKKKDFLGAKNCYMRALEQSTNKRSLQELSMVLRQIPGNSEVVLRNLVESLNRAKAAVELDLNDAKSWYVLGNAHMTRFFKASFSEADMDKALQAYQRSERLGGDTNPDLFFNKANVLMYKEAYQAA 155          
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: W4H469_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H469_9STRA)

HSP 1 Score: 165 bits (417), Expect = 2.160e-47
Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 1
Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 513
            +G+AL+VF +++P +E  L++A KL P   D W  LG+C WKK DL  AK CF   LD G    +LR LSMLLR++   P+E S +++ S+  AK+A+ +D   G+SWYV+GNAY+  FF  +    DLDR+L AY RAE+     NPDL FNRA V +Y++DY  A++ +
Sbjct:   62 KGKALEVFPEYNPSSEALLSQAAKLDPCNLDIWVCLGNCLWKKGDLQAAKTCFENCLDYGPSKHALRSLSMLLRKMGTKPEEKSHNIKTSIVHAKQALNMDIQDGESWYVMGNAYLALFFASSHSTVDLDRSLAAYARAEAGGAANNPDLHFNRANVHRYKEDYALAVQSF 232          
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: UPI0014553DA5 (tetratricopeptide repeat protein 5-like isoform X1 n=2 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553DA5)

HSP 1 Score: 166 bits (419), Expect = 2.670e-46
Identity = 87/175 (49.71%), Postives = 114/175 (65.14%), Query Frame = 1
Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKD--LDRALQAYKRAESSDV-KRNPDLFFNRAQVLQYRQDYPEAIRDYR 516
            RGRAL+V  +F  EA  CL++AVKL P   + W  LG CYWK KD+  A+ CF  AL+  R   SLR LSM+LRQL  T +E +  +QES+  AKEAV+LD G G SW++ GNAY+T FF   GG K   L + L AY +AE   V K NPDL+FNRA + ++++DY  A+  Y+
Sbjct:   72 RGRALNVMPEFSSEALECLSKAVKLDPKLVEAWNQLGECYWKNKDIEAARNCFNGALNHSRNKVSLRNLSMVLRQLGKTKEERAKFIQESVEHAKEAVQLDYGDGTSWFIAGNAYLTVFFN--GGQKSGILKQCLGAYSQAEKDTVQKSNPDLYFNRATIFKFQEDYVAALDGYK 244          
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: W4H3U9_9STRA (TTC5_OB domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3U9_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.220e-46
Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 1
Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 513
            +G+AL+VF +++P +E  L++A KL P   D W  LG+C WKK DL  AK CF   LD G    +LR LSMLLR++   P+E S +++ S+  AK+A+ +D   G+SWYV+GNAY+  FF  +    DLDR+L AY RAE+     NPDL FNRA V +Y++DY  A++ +
Sbjct:   63 KGKALEVFPEYNPSSEALLSQAAKLDPCNLDIWVCLGNCLWKKGDLQAAKTCFENCLDYGPSKHALRSLSMLLRKMGTKPEEKSHNIKTSIVHAKQALNMDIQDGESWYVMGNAYLALFFASSHSTVDLDRSLAAYARAEAGGAANNPDLHFNRANVHRYKEDYALAVQSF 233          
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: W4H5Y4_9STRA (TTC5_OB domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5Y4_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.500e-46
Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 1
Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 513
            +G+AL+VF +++P +E  L++A KL P   D W  LG+C WKK DL  AK CF   LD G    +LR LSMLLR++   P+E S +++ S+  AK+A+ +D   G+SWYV+GNAY+  FF  +    DLDR+L AY RAE+     NPDL FNRA V +Y++DY  A++ +
Sbjct:   67 KGKALEVFPEYNPSSEALLSQAAKLDPCNLDIWVCLGNCLWKKGDLQAAKTCFENCLDYGPSKHALRSLSMLLRKMGTKPEEKSHNIKTSIVHAKQALNMDIQDGESWYVMGNAYLALFFASSHSTVDLDRSLAAYARAEAGGAANNPDLHFNRANVHRYKEDYALAVQSF 237          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LCT9_9PHAE5.620e-8373.99TTC5_OB domain-containing protein n=1 Tax=Ectocarp... [more]
D7G7M4_ECTSI6.950e-8272.83TTC5_OB domain-containing protein n=1 Tax=Ectocarp... [more]
T0S5G9_SAPDV1.710e-5150.29TTC5_OB domain-containing protein n=1 Tax=Saproleg... [more]
A0A1V9YGG6_9STRA9.070e-5151.46TTC5_OB domain-containing protein n=1 Tax=Achlya h... [more]
A0A067CIK2_SAPPC1.940e-5049.71TTC5_OB domain-containing protein n=1 Tax=Saproleg... [more]
A0A7S3UMN7_HETAK1.560e-4751.30Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W4H469_9STRA2.160e-4746.20Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI0014553DA52.670e-4649.71tetratricopeptide repeat protein 5-like isoform X1... [more]
W4H3U9_9STRA3.220e-4646.20TTC5_OB domain-containing protein n=2 Tax=Aphanomy... [more]
W4H5Y4_9STRA3.500e-4646.20TTC5_OB domain-containing protein n=2 Tax=Aphanomy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87060contigH-elongata_contig87060:113..2478 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score262.3
Seed ortholog evalue1.6e-67
Seed eggNOG ortholog2880.D7G7M4
Preferred nameTTC5
GOsGO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006355,GO:0006357,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0019219,GO:0019222,GO:0023051,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0080090,GO:0097159,GO:1901363,GO:1901796,GO:1902531,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.chromatin binding
EggNOG OGs2C216@1,2QQ6C@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-22_001810.1
Exons5
Model size516
Cds size516
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87060.16254.1prot_H-elongata_contig87060.16254.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig87060 113..2478 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931271.3598793-CDS-H-elongata_contig87060:112..2111622931271.3598793-CDS-H-elongata_contig87060:112..211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87060 113..211 -
1691679767.873408-CDS-H-elongata_contig87060:112..2111691679767.873408-CDS-H-elongata_contig87060:112..211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87060 113..211 -
1622931271.3772652-CDS-H-elongata_contig87060:420..5731622931271.3772652-CDS-H-elongata_contig87060:420..573Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87060 421..573 -
1691679767.8845732-CDS-H-elongata_contig87060:420..5731691679767.8845732-CDS-H-elongata_contig87060:420..573Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87060 421..573 -
1622931271.393615-CDS-H-elongata_contig87060:1605..16921622931271.393615-CDS-H-elongata_contig87060:1605..1692Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87060 1606..1692 -
1691679767.8934722-CDS-H-elongata_contig87060:1605..16921691679767.8934722-CDS-H-elongata_contig87060:1605..1692Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87060 1606..1692 -
1622931271.426197-CDS-H-elongata_contig87060:1967..20781622931271.426197-CDS-H-elongata_contig87060:1967..2078Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87060 1968..2078 -
1691679767.9043615-CDS-H-elongata_contig87060:1967..20781691679767.9043615-CDS-H-elongata_contig87060:1967..2078Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87060 1968..2078 -
1622931271.4391062-CDS-H-elongata_contig87060:2412..24781622931271.4391062-CDS-H-elongata_contig87060:2412..2478Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87060 2413..2478 -
1691679767.9262156-CDS-H-elongata_contig87060:2412..24781691679767.9262156-CDS-H-elongata_contig87060:2412..2478Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87060 2413..2478 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig87060.16254.1

>prot_H-elongata_contig87060.16254.1 ID=prot_H-elongata_contig87060.16254.1|Name=mRNA_H-elongata_contig87060.16254.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp
RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAK
RCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKL
DAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDL
FFNRAQVLQYRQDYPEAIRDYR
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mRNA from alignment at H-elongata_contig87060:113..2478-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig87060.16254.1 ID=mRNA_H-elongata_contig87060.16254.1|Name=mRNA_H-elongata_contig87060.16254.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2366bp|location=Sequence derived from alignment at H-elongata_contig87060:113..2478- (Himanthalia elongata Himel1 dioecious)
AGAGGGCGTGCTCTGGACGTCTTCAGCGACTTCGATCCAGAGGCGGAGAG GTGCTTGGCGCGAGCGGTATGACCATGCGAAAGAGACACTAAAGCGTCCG TATCCTTCCCCCAAAGACGCTTTCAAGGACGAGGACGAGGAAAGACTGCT GGGACAGTCAGTGGCTTAAGATCCGTACGCTTCATTCCCCGGCAACACAG AATCTCGTCGGCCTTTCATGTTCCCAGAAACGTAATCCGTGCGCAGTTGG TTCGAGGCGATATTTGCTTCTACCCTACGCTACCCGAGGCACAAAGCGCA GAAGAAGAAAAAAAAAATGGAATCCTCATCAGCTATCGCTGACTCGCTGC GCCTACGTCGCCCGGTTTTCCGTTCGTGCGACGGAACACGTGAATCCCAG GTTAAGCTGCACCCAAGCGAGCCCGACGGATGGACCGCCCTTGGCCATTG CTACTGGAAGAAGAAGGACCTTCTCACCGCGAAGAGATGCTTTTTGCAAG CGTTGGACAAGGTTAACCGTGCCTTCCGATTTCACGATTTAGGACCTTCG TCGAGGGCGAGATCGCCTGCGTTGACTGAAAGAGATTTCCAGACGTCTGC GCCTCCAGCTCTAGAAAAATCCTTCACCCTAGACAACAAACGCACGGGCT CGAGATTTTATCACAATTGCTTCGGGACAGCCTACTAGTCAGAAAGCCTC AGATCTCCGACGCTTGCAGCACCTCGCTTTCTTCTACCGCCTTGAACGTC ACGCCGGGTCCTGTCTGCTCGATGTAAATAACCAAGGGTCGCAAGCCAGA TTCCCTTCGCCAGCTGTCGATGCTGCTGAGGCAACTCCCTGGCACGCCTC AAGAGTCCAGTGCTCATCTTCAGGTTTGTCGTTTTTCAAATTTAATGACG TCACGTCGCCTGTGGGAGATAGTTAGCTGGTGAACCTTGGTACGACACGA TACTCCAAGACGATCGTCGCTTCCCTGGCGTCCATCCGCTACCTTCTGCC AGGCTCACGTTTTTTGTGGAACTCCCCCACCACCCCTCCCCCTCTCCAAT AGAGCCAGGGTTTCCACGACAGTGCAGTCGGTGAAGGGGGGGGGGAAGGC TTGGTTGACTGTTTGGCATCGGTACGTTGTAATTTCTTGTTGAGTGTCGT CGGACGTTGCCTACCCGTAGCCTAGATATATCACTTACGATTATGTTCCC TTTGTTAGATGGTTTATTTGACACATTTACAGCACATATTTACAGCGGTC TGCCTCTGCAGCCTCTAGTTCAGATTATGGGCTAGAAACAGAACTCCAGA CCGTAAGACACTGTAAATAGTCTATTAATAGTTCGTGCCGGAGGATCTAC ACTGTCGTCGTCATGCGGGTTGGATTTTAACTGTTCTCTGAGGGGGGGGG GGGGGGGGGGGCCTGCAAAAAACTTTTACCCCGGTCTCCGGCCCCCCATT CCCNNNNNNNNNNTTGTTTGGTGTCGTGGGTTTTGTTTTTGTTTGGTTCT GGGGGCGGGGGCGGGGGATGTAGTAGAGATTGTTAGACCTGACAAAAACT TTCATCGCGATCTCGGACCATCCATTCCCGGTGATGCACGTAGCGGGATG ACGTCACGAAGATTGTGACCCACCCGTTGACCTCCGCGATATATATCTTT GGCCCCACAAACGGGGTTGGCATTTGATATATATACCTCCGTGGCTGACT CAGTTATTGGGTCATCGGAGTTGTTAATTAATTTGTTAGCGTGAAGTGTT TTAGTGTTAGTGCAAGAGGCAAAAGGCAGGAAAAGTGTGTGAATCAATCA AAGTATATGACTTACCTGTGTGGCGTCATTTGACCAGACCGCTCTGTCTC GAGCGAGGTGACGTTTTCCCATCCCTTGCTCGGTTGTAATATCGTTTTTC CAAAGGAGAGCCTTCGACTGGCTAAGGAAGCAGTCAAGCTCGATGCAGGG AGCGGAGATTCATGGTATGTCCTAGGGAATGCCTACGTGACCTCTTTCTT CCGGCTCACCGGGGGCATGAAGGATCTCGACAGGGCTCTGCAGGCGTACA AGAGGGCGGTAAGGTTGTTGCAAGTGAACGGTGCGGTCATCCCTCATTTC ATTTTCACACATACAGACACATACACACATAGTATAACGGTTTGAAAATC TTGCAACAGCGTAAATTTTGTTTAGCGGGATCAGCAGAACTGCGAAGGAT ATGAATATATTTGTAGCCTTCCCCGCAGAGAATTGGACGTTTCCCCGCCC TCACGACCCCTGACCAGGAATCCAGCGACGTCAAGCGTAACCCAGACTTG TTCTTCAACCGAGCTCAAGTGTTGCAGTATCGCCAAGACTATCCCGAGGC CATCCGCGACTATAGG
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Coding sequence (CDS) from alignment at H-elongata_contig87060:113..2478-

>mRNA_H-elongata_contig87060.16254.1 ID=mRNA_H-elongata_contig87060.16254.1|Name=mRNA_H-elongata_contig87060.16254.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1032bp|location=Sequence derived from alignment at H-elongata_contig87060:113..2478- (Himanthalia elongata Himel1 dioecious)
AGAGGGCGTGCTCTGGACGTCTTCAGCGACTTCGATCCAGAGGCGGAGAG
GTGCTTGGCGCGAGCGAGAGGGCGTGCTCTGGACGTCTTCAGCGACTTCG
ATCCAGAGGCGGAGAGGTGCTTGGCGCGAGCGGTTAAGCTGCACCCAAGC
GAGCCCGACGGATGGACCGCCCTTGGCCATTGCTACTGGAAGAAGAAGGA
CCTTCTCACCGCGAAGAGATGCTTTTTGCAAGCGTTGGACAAGGTTAAGC
TGCACCCAAGCGAGCCCGACGGATGGACCGCCCTTGGCCATTGCTACTGG
AAGAAGAAGGACCTTCTCACCGCGAAGAGATGCTTTTTGCAAGCGTTGGA
CAAGGGTCGCAAGCCAGATTCCCTTCGCCAGCTGTCGATGCTGCTGAGGC
AACTCCCTGGCACGCCTCAAGAGTCCAGTGCTCATCTTCAGGGTCGCAAG
CCAGATTCCCTTCGCCAGCTGTCGATGCTGCTGAGGCAACTCCCTGGCAC
GCCTCAAGAGTCCAGTGCTCATCTTCAGGAGAGCCTTCGACTGGCTAAGG
AAGCAGTCAAGCTCGATGCAGGGAGCGGAGATTCATGGTATGTCCTAGGG
AATGCCTACGTGACCTCTTTCTTCCGGCTCACCGGGGGCATGAAGGATCT
CGACAGGGCTCTGCAGGCGTACAAGAGGGCGGAGAGCCTTCGACTGGCTA
AGGAAGCAGTCAAGCTCGATGCAGGGAGCGGAGATTCATGGTATGTCCTA
GGGAATGCCTACGTGACCTCTTTCTTCCGGCTCACCGGGGGCATGAAGGA
TCTCGACAGGGCTCTGCAGGCGTACAAGAGGGCGGAATCCAGCGACGTCA
AGCGTAACCCAGACTTGTTCTTCAACCGAGCTCAAGTGTTGCAGTATCGC
CAAGACTATCCCGAGGCCATCCGCGACTATAGGGAATCCAGCGACGTCAA
GCGTAACCCAGACTTGTTCTTCAACCGAGCTCAAGTGTTGCAGTATCGCC
AAGACTATCCCGAGGCCATCCGCGACTATAGG
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