mRNA_H-elongata_contig87060.16254.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: A0A6H5LCT9_9PHAE (TTC5_OB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCT9_9PHAE) HSP 1 Score: 266 bits (681), Expect = 5.620e-83 Identity = 128/173 (73.99%), Postives = 146/173 (84.39%), Query Frame = 1
Query: 1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAES-SDVKRNPDLFFNRAQVLQYRQDYPEAIRDYR 516
RGRALDVF+ F+P AE+CLA+AVKLHPS+PDGWTALGHCYWKK DL AKRCFL +L+K RK D+LRQLSMLLRQ+PGT +E A +QESLR AKEAV LD G GDSWYVLGN YV SFFR + G+KDLDRALQAYK+AE+ + NPDLFFNRAQV QYR+DYPE+IRD R
Sbjct: 175 RGRALDVFTKFNPAAEKCLAKAVKLHPSDPDGWTALGHCYWKKPDLFAAKRCFLTSLEKARKADTLRQLSMLLRQMPGTAEEKGAQVQESLRFAKEAVTLDIGCGDSWYVLGNGYVASFFRSSRGIKDLDRALQAYKKAEAYGGEEGNPDLFFNRAQVFQYREDYPESIRDLR 347
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: D7G7M4_ECTSI (TTC5_OB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M4_ECTSI) HSP 1 Score: 260 bits (664), Expect = 6.950e-82 Identity = 126/173 (72.83%), Postives = 144/173 (83.24%), Query Frame = 1
Query: 1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAES-SDVKRNPDLFFNRAQVLQYRQDYPEAIRDYR 516
RGRALDVF+ F+P AE+CLA+AVKLHPSEPDGWTAL HCYWKK DL AKRCFL +L+K RK D+L+QLSMLLRQ+PGT +E A L+ESLRLAKEAV LD G SWYVLGN YV SFF + G+KDLDRALQAYK+AE+ K NPDLFFNRAQV QYR+DYPE+IRD+R
Sbjct: 33 RGRALDVFTKFNPNAEKCLAKAVKLHPSEPDGWTALAHCYWKKPDLFAAKRCFLTSLEKARKADTLQQLSMLLRQMPGTAEEKGAQLEESLRLAKEAVTLDVECGYSWYVLGNGYVASFFGSSRGIKDLDRALQAYKKAEAYGGEKGNPDLFFNRAQVFQYREDYPESIRDFR 205
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: T0S5G9_SAPDV (TTC5_OB domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S5G9_SAPDV) HSP 1 Score: 179 bits (453), Expect = 1.710e-51 Identity = 86/171 (50.29%), Postives = 115/171 (67.25%), Query Frame = 1
Query: 1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 513
+G+ALD F +D AE+ L++A KL P D W ALG+C+WKK DLL AK CF L+ G +LR LSM+LR+L P++ + H++ SL+ AK+AV LD G+SWYVLGNAY+ FF + DLDR+L AY RAE + +NPDL FNRA V +Y++DY EA+ Y
Sbjct: 70 KGKALDAFPSYDATAEQLLSQAAKLDPCNLDAWVALGNCFWKKGDLLVAKNCFENCLEYGSSKHALRSLSMVLRKLGTKPEDKADHVRASLQRAKQAVSLDLTDGESWYVLGNAYLALFFGDSHSTVDLDRSLAAYTRAEKAGAGQNPDLHFNRANVQRYKEDYAEAVASY 240
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: A0A1V9YGG6_9STRA (TTC5_OB domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGG6_9STRA) HSP 1 Score: 177 bits (448), Expect = 9.070e-51 Identity = 88/171 (51.46%), Postives = 113/171 (66.08%), Query Frame = 1
Query: 1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 513
+G+ALD F +D AE+ L++A KL P D W ALG+C WKK DLL AK CF L+ G +LR LSM+LR+L P++ H++ SL+ AK+AV LD G+SWYVLGNAY+ FF T DLDR+L AY RAE + RNPDL FNRA V +Y++DY EA+ Y
Sbjct: 68 KGKALDAFPIYDATAEQLLSQAAKLDPCNLDTWVALGNCLWKKGDLLMAKNCFENCLEYGLSKHALRSLSMVLRKLGTRPEDKVHHVRMSLQHAKQAVSLDLADGESWYVLGNAYLALFFGDTHSTIDLDRSLAAYTRAEKAGAGRNPDLHFNRANVFRYKEDYAEAVTSY 238
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: A0A067CIK2_SAPPC (TTC5_OB domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CIK2_SAPPC) HSP 1 Score: 176 bits (445), Expect = 1.940e-50 Identity = 85/171 (49.71%), Postives = 115/171 (67.25%), Query Frame = 1
Query: 1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 513
+G+ALD F +D AE+ L++A KL P D W ALG+C+WKK DL+ AK CF L+ G +LR LSM+LR+L P++ + H++ SL+ AK+AV LD G+SWYVLGNAY+ FF + DLDR+L AY RAE + +NPDL FNRA V +Y++DY EA+ Y
Sbjct: 70 KGKALDAFPSYDATAEQLLSQAAKLDPCNLDAWVALGNCFWKKGDLVLAKHCFENCLEYGSSKHALRSLSMVLRKLGTKPEDKADHVRASLQHAKQAVGLDLTDGESWYVLGNAYLALFFGDSHSTVDLDRSLAAYTRAEKAGAGQNPDLHFNRANVHRYKEDYAEAVASY 240
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: A0A7S3UMN7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UMN7_HETAK) HSP 1 Score: 160 bits (406), Expect = 1.560e-47 Identity = 79/154 (51.30%), Postives = 104/154 (67.53%), Query Frame = 1
Query: 40 EAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEA 501
EAE L +AVKL+P D W LGHC WKKKD L AK C+++AL++ SL++LSM+LRQ+PG + +L ESL AK AV+LD SWYVLGNA++T FF+ + D+D+ALQAY+R+E NPDLFFN+A VL Y++ Y A
Sbjct: 2 EAEEHLQQAVKLNPDHLDSWNTLGHCLWKKKDFLGAKNCYMRALEQSTNKRSLQELSMVLRQIPGNSEVVLRNLVESLNRAKAAVELDLNDAKSWYVLGNAHMTRFFKASFSEADMDKALQAYQRSERLGGDTNPDLFFNKANVLMYKEAYQAA 155
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: W4H469_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H469_9STRA) HSP 1 Score: 165 bits (417), Expect = 2.160e-47 Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 1
Query: 1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 513
+G+AL+VF +++P +E L++A KL P D W LG+C WKK DL AK CF LD G +LR LSMLLR++ P+E S +++ S+ AK+A+ +D G+SWYV+GNAY+ FF + DLDR+L AY RAE+ NPDL FNRA V +Y++DY A++ +
Sbjct: 62 KGKALEVFPEYNPSSEALLSQAAKLDPCNLDIWVCLGNCLWKKGDLQAAKTCFENCLDYGPSKHALRSLSMLLRKMGTKPEEKSHNIKTSIVHAKQALNMDIQDGESWYVMGNAYLALFFASSHSTVDLDRSLAAYARAEAGGAANNPDLHFNRANVHRYKEDYALAVQSF 232
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: UPI0014553DA5 (tetratricopeptide repeat protein 5-like isoform X1 n=2 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553DA5) HSP 1 Score: 166 bits (419), Expect = 2.670e-46 Identity = 87/175 (49.71%), Postives = 114/175 (65.14%), Query Frame = 1
Query: 1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKD--LDRALQAYKRAESSDV-KRNPDLFFNRAQVLQYRQDYPEAIRDYR 516
RGRAL+V +F EA CL++AVKL P + W LG CYWK KD+ A+ CF AL+ R SLR LSM+LRQL T +E + +QES+ AKEAV+LD G G SW++ GNAY+T FF GG K L + L AY +AE V K NPDL+FNRA + ++++DY A+ Y+
Sbjct: 72 RGRALNVMPEFSSEALECLSKAVKLDPKLVEAWNQLGECYWKNKDIEAARNCFNGALNHSRNKVSLRNLSMVLRQLGKTKEERAKFIQESVEHAKEAVQLDYGDGTSWFIAGNAYLTVFFN--GGQKSGILKQCLGAYSQAEKDTVQKSNPDLYFNRATIFKFQEDYVAALDGYK 244
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: W4H3U9_9STRA (TTC5_OB domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3U9_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.220e-46 Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 1
Query: 1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 513
+G+AL+VF +++P +E L++A KL P D W LG+C WKK DL AK CF LD G +LR LSMLLR++ P+E S +++ S+ AK+A+ +D G+SWYV+GNAY+ FF + DLDR+L AY RAE+ NPDL FNRA V +Y++DY A++ +
Sbjct: 63 KGKALEVFPEYNPSSEALLSQAAKLDPCNLDIWVCLGNCLWKKGDLQAAKTCFENCLDYGPSKHALRSLSMLLRKMGTKPEEKSHNIKTSIVHAKQALNMDIQDGESWYVMGNAYLALFFASSHSTVDLDRSLAAYARAEAGGAANNPDLHFNRANVHRYKEDYALAVQSF 233
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: W4H5Y4_9STRA (TTC5_OB domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5Y4_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.500e-46 Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 1
Query: 1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 513
+G+AL+VF +++P +E L++A KL P D W LG+C WKK DL AK CF LD G +LR LSMLLR++ P+E S +++ S+ AK+A+ +D G+SWYV+GNAY+ FF + DLDR+L AY RAE+ NPDL FNRA V +Y++DY A++ +
Sbjct: 67 KGKALEVFPEYNPSSEALLSQAAKLDPCNLDIWVCLGNCLWKKGDLQAAKTCFENCLDYGPSKHALRSLSMLLRKMGTKPEEKSHNIKTSIVHAKQALNMDIQDGESWYVMGNAYLALFFASSHSTVDLDRSLAAYARAEAGGAANNPDLHFNRANVHRYKEDYALAVQSF 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig87060.16254.1 >prot_H-elongata_contig87060.16254.1 ID=prot_H-elongata_contig87060.16254.1|Name=mRNA_H-elongata_contig87060.16254.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKback to top mRNA from alignment at H-elongata_contig87060:113..2478- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig87060.16254.1 ID=mRNA_H-elongata_contig87060.16254.1|Name=mRNA_H-elongata_contig87060.16254.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2366bp|location=Sequence derived from alignment at H-elongata_contig87060:113..2478- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig87060:113..2478- >mRNA_H-elongata_contig87060.16254.1 ID=mRNA_H-elongata_contig87060.16254.1|Name=mRNA_H-elongata_contig87060.16254.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1032bp|location=Sequence derived from alignment at H-elongata_contig87060:113..2478- (Himanthalia elongata Himel1 dioecious)back to top |