prot_H-elongata_contig87015.16252.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig87015.16252.1
Unique Nameprot_H-elongata_contig87015.16252.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length292
Homology
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: D7FK70_ECTSI (tRNA-splicing endonuclease positive effector n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK70_ECTSI)

HSP 1 Score: 332 bits (852), Expect = 8.340e-105
Identity = 180/262 (68.70%), Postives = 209/262 (79.77%), Query Frame = 0
Query:   31 SPAAARQAFAILEGAQEQAAKEILEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVNDHGNGHESGQKDGKGGGEVAKRRGQLESRGGIETGQGENMGGVWSSQSPISSSALGTSYCNNREARAVAIALELFVGGGDVE 292
            S +A+R+A+A+LE AQ +AA++I++  DVVVCSCIGAGNDAF+RAIGG Q+ GFSS+RFSTV+IDEATQATEAAALVPII GCQQLVLVGDQNQLPPTVI PEA+DGGLGTSLFSRLMHAGIKPILL+RQYRMHPAIS+FPS HFY+GQV++GIR +DRPTP GFPWP  + PVAFVRV++ G    +G            RRGQLESRGG E       GG ++S      +ALGTSYCN REA AVA ALEL +  GDVE
Sbjct:  403 SQSASRRAYAVLEAAQLEAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGESHAGVG--------GARRGQLESRGGTEAAV---QGGSFAS------AALGTSYCNVREAEAVAFALELLLREGDVE 647          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A6H5L473_9PHAE (AAA_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L473_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 1.050e-75
Identity = 159/294 (54.08%), Postives = 188/294 (63.95%), Query Frame = 0
Query:   22 SSPSSSKGSSPA--AARQAFAILEGAQEQAAKEILEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQ---------------------LPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVNDHGNGHESGQKDGKGGGEVAKRRGQLESRGGIETGQGENMGGVWSSQSPISSSALGTSYCNNREARAVAIALELFVGGGDVE 292
            S P +S  ++P+  A+R+A+A+LE AQ +AA++I++  DVVVCSCIGAGNDAF+RAIGG Q+ GFSS+RFSTV+IDEATQATEAAALVPII GCQQLVLVGDQNQ                     LPPTVI PEA+DGGLGTSLFSRLMHAGIKPILL+R                                P GFPWP  + PVAFVRV++ G   E  + +   GG    +RGQLESRGG E       GG ++S      +ALGTSYCN REA AVA ALEL +  GDVE
Sbjct:  376 SKPRNSSATTPSQSASRRAYAVLEAAQLEAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQNSTRPPLFPPLRPRFIGDGPQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRLI------------------------------PAGFPWPAASGPVAFVRVSESGGEREKRESNAGVGG---AKRGQLESRGGTEAAV---QGGSFAS------AALGTSYCNLREAEAVAFALELLLREGDVE 627          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A835Z7U9_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U9_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.510e-56
Identity = 99/170 (58.24%), Postives = 122/170 (71.76%), Query Frame = 0
Query:   58 DVVVCSCIGAGNDAFIRAIGGGQDSGFSS-VRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVNDHGNGHESGQKDGKGG 226
            DVVVCSCIGAG +    A    +++G ++ + FSTVLIDEATQATE A+LVP+  GC+QL+LVGDQNQLPPT++S  A  GGL TSLF+RLM AG+ P++L RQYRMHP I+ FP   FY G+++S  R  DRPTPRGFPWP    PVAFV V D  +G    +  G GG
Sbjct:    2 DVVVCSCIGAGGEQLAAASEQCEETGAAAGLTFSTVLIDEATQATEPASLVPLTRGCEQLILVGDQNQLPPTILSRGAAAGGLATSLFARLMLAGVAPVVLARQYRMHPRIAAFPGARFYGGRLASAPRAVDRPTPRGFPWPNAAVPVAFVAVRDDSDGARGLEARGSGG 171          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A0G4HN17_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HN17_9ALVE)

HSP 1 Score: 168 bits (426), Expect = 2.210e-43
Identity = 93/194 (47.94%), Postives = 121/194 (62.37%), Query Frame = 0
Query:   45 AQEQAAKEILEEVDVVVCSCIGAGNDAFIRAIG-GGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVNDHGNGHESGQKDGKGGGEVAKRRGQLE 237
            A+++A   I+   DVVV SC+GAG   F+ A+   G D   S + FSTVL+DEA+Q TE AALVP++ G +Q++LVGDQNQLPPTV +    +  L  SLF RL+ AG+KP +L RQYRMHP I+ FPS  FY G++ S  +  DRP PRG  WP   APV    V D    H   + D KGGG+    + + E
Sbjct: 1695 AEKRALWRIMASADVVVSSCMGAGKVDFVNALECPGWDPERSPISFSTVLLDEASQVTEPAALVPLVTGAEQVILVGDQNQLPPTVTTESVKEKCLDVSLFVRLVLAGVKPFMLGRQYRMHPVIAAFPSAQFYGGKLESVPKAEDRPAPRGVLWPDRNAPVMMAAVTDE-TLHLESRADWKGGGDTTSYQNKRE 1887          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A2V3I143_9EURY (Helicase ATP-binding domain-containing protein n=8 Tax=root TaxID=1 RepID=A0A2V3I143_9EURY)

HSP 1 Score: 166 bits (419), Expect = 3.290e-43
Identity = 84/164 (51.22%), Postives = 107/164 (65.24%), Query Frame = 0
Query:   46 QEQAAKEILEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRV 209
            + Q   +IL    V+ C+CIG+G++                 RFS VLIDEATQATE AALVP++ G +Q+VL+GD  QLPPTVIS  A++GGL  SLF RL+  GI+P+LL  QYRMHPAIS FP+GHFY+  +  G+   DRPTP G  WP    P+AF+ V
Sbjct:  341 ESQMRDDILNRSQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPAALVPLVRGARQIVLIGDHRQLPPTVISQRAENGGLNRSLFERLVEMGIEPLLLRTQYRMHPAISAFPNGHFYDDLLEDGVTSEDRPTPAGLLWPDWDMPIAFLPV 492          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A7R9VZS5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VZS5_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.830e-43
Identity = 83/160 (51.88%), Postives = 106/160 (66.25%), Query Frame = 0
Query:   54 LEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVNDHG 213
            L+   V+ C+CIG+G+D               ++ F  VL+DEATQATE A LVP+  GC+QLVLVGD  QLPPTV+S  A++ GLG  LFSRL+  G+ P +LD QYRMHPAI+ FPS  FY G++ +G+ P +R    GFPWP +  PVAFV VN HG
Sbjct:   14 LKAAQVICCTCIGSGSDML------------DNMTFDRVLVDEATQATEPAVLVPLTRGCRQLVLVGDHCQLPPTVLSTIAEEEGLGVPLFSRLVACGVPPFMLDTQYRMHPAIAMFPSDLFYGGKLCNGVSPPERRPLAGFPWPREEFPVAFVPVN-HG 160          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A0G4FCG3_VITBC (SAP domain-containing protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FCG3_VITBC)

HSP 1 Score: 167 bits (422), Expect = 7.250e-43
Identity = 91/175 (52.00%), Postives = 118/175 (67.43%), Query Frame = 0
Query:   45 AQEQAAKEILEEVDVVVCSCIGAGNDAFIRAIGGGQ-DSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVNDHGNGHES 218
            A+++A  +I+ + DVVV S I AG           + D+    V+FSTVLIDEA+Q TE AA VP++ GC+QL+LVGDQNQLP TV+S +A   GL  SLFSRL+ AG+ P++L  QYRMHPAI+ FPS  FY+ ++ S  +P +RPTP GFPWP D  PVAFV V +     ES
Sbjct:  827 AEQRAIYDIVTKADVVVTSAISAGQPGLTSTTQVPEWDTQRVPVKFSTVLIDEASQVTEPAASVPMVKGCEQLILVGDQNQLPATVVSDKAKAEGLNLSLFSRLVLAGVVPVMLAAQYRMHPAIAMFPSFEFYDDRLISIPKPEERPTPGGFPWPDDVKPVAFVSVMEPAGYSES 1001          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A2E0PQ68_9EURY (AAA domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E0PQ68_9EURY)

HSP 1 Score: 164 bits (416), Expect = 8.790e-43
Identity = 81/164 (49.39%), Postives = 107/164 (65.24%), Query Frame = 0
Query:   46 QEQAAKEILEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRV 209
            + Q   EIL+   V+ C+CIG+G++                 RFS VLIDEATQATE A LVP++ G +Q+V+VGD  QLPPTV+S  A++GGL  SLF RL+  G+  ILLD QYRMHP+IS FP+ HFY+G++  GI  ++RPTP G  WP    PV F+ +
Sbjct:  342 ERQIRDEILDRAQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPATLVPLVRGARQVVMVGDHKQLPPTVVSRRAENGGLTRSLFERLVDMGVSTILLDTQYRMHPSISEFPNSHFYDGELMDGIEASERPTPSGLLWPDWDIPVCFIPI 493          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A7S0MPY6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MPY6_9CRYP)

HSP 1 Score: 152 bits (384), Expect = 1.510e-42
Identity = 79/151 (52.32%), Postives = 104/151 (68.87%), Query Frame = 0
Query:   54 LEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPV 204
            + E DVVV S +GAG++    A+    D+    +R+ TV++DEA+QATE A LVP+  GC++LVLVGD  QLPPTV SP A   GLG SL +RL+ AG++P +L+ QYRMHPA+++FPS  FY G++ S   PADRP P GF WP    PV
Sbjct:    3 VREADVVVASLVGAGHEGLDDALALLPDAP-GGLRYGTVVVDEASQATEPATLVPLTRGCRRLVLVGDHCQLPPTVASPHALRAGLGVSLLARLVAAGVRPQVLEDQYRMHPALADFPSAAFYAGRLRSVPAPADRPLPPGFDWPRPDTPV 152          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A1Z9IVA1_9EURY (AAA domain-containing protein n=5 Tax=unclassified Euryarchaeota TaxID=115531 RepID=A0A1Z9IVA1_9EURY)

HSP 1 Score: 163 bits (413), Expect = 2.320e-42
Identity = 83/159 (52.20%), Postives = 105/159 (66.04%), Query Frame = 0
Query:   52 EILEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVN 210
            +IL+   V+ C+CIG+G+D                 RFS VLIDEATQATE A+LVP++ G +Q+VL+GD  QLPPTVIS  A+DGGL  SLF RL+  GI+P LL  QYRMHP+IS FP+ HFY G +  G+ P +R  P G  WP   AP+AFV V+
Sbjct:  348 DILDRCQVLCCTCIGSGHDLL------------DGRRFSRVLIDEATQATEPASLVPLVRGSRQIVLIGDHKQLPPTVISRRAEDGGLSRSLFERLIDMGIEPKLLTTQYRMHPSISEFPNVHFYEGMLEDGVSPEERTAPVGMLWPDWDAPMAFVPVD 494          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK70_ECTSI8.340e-10568.70tRNA-splicing endonuclease positive effector n=1 T... [more]
A0A6H5L473_9PHAE1.050e-7554.08AAA_11 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7U9_9STRA1.510e-5658.24AAA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A0G4HN17_9ALVE2.210e-4347.94Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A2V3I143_9EURY3.290e-4351.22Helicase ATP-binding domain-containing protein n=8... [more]
A0A7R9VZS5_9STRA4.830e-4351.88Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A0G4FCG3_VITBC7.250e-4352.00SAP domain-containing protein n=4 Tax=Vitrella bra... [more]
A0A2E0PQ68_9EURY8.790e-4349.39AAA domain-containing protein n=1 Tax=Euryarchaeot... [more]
A0A7S0MPY6_9CRYP1.510e-4252.32Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A1Z9IVA1_9EURY2.320e-4252.20AAA domain-containing protein n=5 Tax=unclassified... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 26..160
e-value: 1.3E-31
score: 112.0
NoneNo IPR availablePANTHERPTHR10887:SF463coord: 41..288
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 41..288
IPR041679DNA2/NAM7 helicase-like, AAA domainPFAMPF13087AAA_12coord: 140..286
e-value: 1.3E-15
score: 57.6
IPR041677DNA2/NAM7 helicase, AAA domainPFAMPF13086AAA_11coord: 37..131
e-value: 2.7E-24
score: 86.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 53..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87015contigH-elongata_contig87015:149..2461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87015.16252.1mRNA_H-elongata_contig87015.16252.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig87015 149..2461 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig87015.16252.1 ID=prot_H-elongata_contig87015.16252.1|Name=mRNA_H-elongata_contig87015.16252.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=292bp
GLIKRGTAEDAEPEGAEAGVPSSPSSSKGSSPAAARQAFAILEGAQEQAA
KEILEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQA
TEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHA
GIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTD
TAPVAFVRVNDHGNGHESGQKDGKGGGEVAKRRGQLESRGGIETGQGENM
GGVWSSQSPISSSALGTSYCNNREARAVAIALELFVGGGDVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041679DNA2/NAM7-like_AAA
IPR041677DNA2/NAM7_AAA_11
IPR027417P-loop_NTPase