prot_H-elongata_contig86621.16221.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig86621.16221.1
Unique Nameprot_H-elongata_contig86621.16221.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length166
Homology
BLAST of mRNA_H-elongata_contig86621.16221.1 vs. uniprot
Match: D7FMN3_ECTSI (Ribosome biogenesis regulatory protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMN3_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 1.460e-64
Identity = 120/165 (72.73%), Postives = 129/165 (78.18%), Query Frame = 0
Query:    1 RAKNEERAGGTPKPGIPVDLAPGRKDRSDGAAPRGGAKGGVASVKRGKDGTRGALEMVQHSTASMGKFDERRPSEPERRKPKGVRRTFKPVTVASGRETQSQIKILNAVMIGKSKSADKEGAARSTKASLAAYDAVEGPHDPGAKRKKGKGAVGKAKKITKRRVK 165
            RAKN ERAGG  KPGIPVDL P  KD         G+ GG A  KRGK  T+GALE+VQHSTASMGKFDERR +EPERRK KGVRR FKPVTV SG ETQ  +KILN+VMIGKSKSADK+G ARS K SLAAYDA+EGP D GAKRKKGKGA GKAKK+TK R K
Sbjct:  188 RAKNVERAGGGAKPGIPVDLLPSAKD---------GSGGGGAPAKRGKANTKGALELVQHSTASMGKFDERRHAEPERRKGKGVRRAFKPVTVGSGEETQGHLKILNSVMIGKSKSADKDGTARSAKESLAAYDAIEGPRDAGAKRKKGKGASGKAKKVTKGRAK 343          
BLAST of mRNA_H-elongata_contig86621.16221.1 vs. uniprot
Match: A0A7S2UUR0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR0_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 9.500e-20
Identity = 73/167 (43.71%), Postives = 102/167 (61.08%), Query Frame = 0
Query:    3 KNEERAGGT--PKPGIPVDLAPGRKDRSDGAAPRGGAKGGVASVKRGKDGTRGALEMVQHSTASMGKFDERRPSEPERRKPKGVRRTFKPVTVASGR-ETQSQIKILNAVMIGKSKSADKEGAARSTKASLAAYDAVEGP-HDPGAKRKKGKGAVGKAKKITKRRVK 165
            KN+  AG T     GIPVDL      RS  +A   G    V  +KRG+D T   L +VQ+STASMGKFDE R  EPE++  +G RR F+P+  A  + E+Q+Q+K + A+++ K KS  K   +  +K+ LA YDA+EG  HD   +++KG+   GK KK+TK+R K
Sbjct:  345 KNQLHAGNTRAAPAGIPVDLVSATA-RSVASARAAGTMKPV--LKRGRDKTEKTLRLVQNSTASMGKFDEVRQGEPEKKARQGKRRKFQPLLSAQPKAESQAQLKTVQAILVNKGKS--KSQVSHQSKSDLAVYDAIEGEKHD--FRKRKGRAGAGKMKKVTKKRGK 504          
BLAST of mRNA_H-elongata_contig86621.16221.1 vs. uniprot
Match: A0A7S0CHW9_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CHW9_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.440e-11
Identity = 61/138 (44.20%), Postives = 80/138 (57.97%), Query Frame = 0
Query:   37 AKGGVASVKRGKDGTRGALEMVQHSTASMGKFDERRPSEPERRKPKGVRRT-FKPVT--VASGRETQSQIKILNAVMIGKSKSADKEGAARSTKASLAA------YDAVEGPHDPGAKRKKGKGAVGKAKKITKRRVK 165
            A  G   +KRGK+ T  AL   Q STASMGKFD+    EPER++   VR+  F  +T    S  E++  +K+LNAVM G    A KE A R+   SLA       YD  +G +D   K+KKG+ A GK KK+TK+R+K
Sbjct:  356 ANAGANPLKRGKELTSRALAATQRSTASMGKFDKMIEGEPERKQ--SVRKQKFDSLTDKTRSRMESEKSMKLLNAVMSGGGAKA-KERARRN--GSLAKGETAYDYDFDDGGYDGSFKKKKGRAAAGKNKKLTKKRIK 488          
BLAST of mRNA_H-elongata_contig86621.16221.1 vs. uniprot
Match: A0A7S4AIZ9_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AIZ9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 5.460e-9
Identity = 75/193 (38.86%), Postives = 92/193 (47.67%), Query Frame = 0
Query:    1 RAKNEERAGGTPK-----------PGIPVDLAPGRKDRSDGAAPRG---GAKGGVASVK------RGKDGTRGALEMVQHSTASMGKFDERRPSEPERRK--PKGVRRTFKPVTVAS--GRETQSQIKILNAVMIG----KSKSADKEGAARSTKASLAAYDAVEGPHDPGAKRKKGKGAVGKAKKITKRRVK 165
            R KNEERAG   K                 L  GRKD    + P G     K  V   K      RGK  T  AL  VQ STAS+GKFD+ R  EPER+K   K  +R F+  T       E  S +KILNAVM G    K+K+  K   A+   A    Y+  +G      ++KKG+G VGK KK+TK+R K
Sbjct:  292 RMKNEERAGNLAKGATNRTMKARDQAYNAGLVAGRKDNK--SLPAGLPVDLKNSVDPNKSADNKLRGKSSTLAALSAVQKSTASLGKFDKMREGEPERKKGLSKTKKRKFENPTDKKVLRSEGDSSMKILNAVMNGGGVAKAKAIRKGQLAKGETAYD--YEFNDGLGASTFRKKKGRGGVGKMKKMTKKRAK 480          
BLAST of mRNA_H-elongata_contig86621.16221.1 vs. uniprot
Match: A0A7S3H4J0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4J0_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.330e-8
Identity = 58/158 (36.71%), Postives = 79/158 (50.00%), Query Frame = 0
Query:   14 PGIPVDLAPGRKDRSDGAAPRGGAKGGVASVKRGKDGTRGALEMVQHSTASMGKFDERRPSEPERRKPKGVRRTFKPVTVASGRETQSQIKILNAVMIGKSKSADKEGAARSTKASLAAYDAV--EGPHD-----------PGAKRKKGKGAVGKAKK 158
            PGIP+D+        DG A            KRG+ G + AL++VQHSTASMG+FDE RP EP R K  G +R+F+   +   ++ +  +K     +  K   ADK+  AR    SLAAY+ +  + P D           P    KKGKG  GK +K
Sbjct:   27 PGIPLDIG------KDGKA------------KRGRGGLKTALQLVQHSTASMGRFDEMRPGEPMR-KLSGKKRSFRD-NIGGAQQDKDSMKAQLRFVADK---ADKK--ARGVTNSLAAYEGIVPDAPSDSFKQRKGRGKAPKTDGKKGKGPNGKGRK 159          
BLAST of mRNA_H-elongata_contig86621.16221.1 vs. uniprot
Match: A0A7R9YG55_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG55_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 7.850e-8
Identity = 60/161 (37.27%), Postives = 84/161 (52.17%), Query Frame = 0
Query:   15 GIPVDLAPGRKDRSDGAAPRGGAKGGVASVKRGKDGTRGALEMVQHSTASMGKFDE---RRPSEPERRKPKGVRRTFKPVTVASG-------RETQSQIKILNAVMIGKSKSADKEGAARSTKAS-LAAYDAVEGPHDPGAKRKKGKGAVGKAKKITKRRV 164
            GIPVDL+  +           GA  G A++KRGK  T+ AL+    STASMG FDE   R+  +  ++  K V    +     SG       RE  + ++IL +V + K K    +   R+  A  +A YDAVEG  D   KRKKG+GA GK KK+T+++ 
Sbjct:  222 GIPVDLSKTKV----------GAGAGDAALKRGKLNTKLALKSAAVSTASMGVFDEGVTRKDLKAGKKGLKAVAERRRNKIKGSGVEKNAVERERSTALEILRSVKVRKEKKDLGQAGMRAKNAQDIAIYDAVEGGPDA-QKRKKGRGAQGKIKKLTRKQT 371          
BLAST of mRNA_H-elongata_contig86621.16221.1 vs. uniprot
Match: A0A484DXV0_BRELC (Ribosome biogenesis regulatory protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXV0_BRELC)

HSP 1 Score: 59.3 bits (142), Expect = 2.410e-7
Identity = 47/123 (38.21%), Postives = 61/123 (49.59%), Query Frame = 0
Query:   41 VASVKRGKDGTRGALEMVQHSTASMGKFDERRPSEPERRKPKGVRRTFKPVTVASGRETQSQIKILNAVMIGKSKSADKEGAARSTKASLAAYDAVEGPHDPGAKRKKGKGAVGKAKKITKRR 163
            + + +RGK+GT  ALE VQ STASMGKFD  R  E ER K KG R  F P T A   E +  +  L  V+  +  +  K+G            +  E   D G ++KKGK      K  TK+R
Sbjct:  210 IKAKQRGKEGTSQALEKVQFSTASMGKFDAMRQGETER-KVKGKRNHFLPTTGAEATERERSLNALKRVLGREENAGKKKGG----------MEXXEDAKDSGKRKKKGKQLKNFTKGATKKR 321          
BLAST of mRNA_H-elongata_contig86621.16221.1 vs. uniprot
Match: A0A7S4ECG7_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECG7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.130e-7
Identity = 50/127 (39.37%), Postives = 66/127 (51.97%), Query Frame = 0
Query:   45 KRGKDGTRGALEMVQHSTASMGKFDE------RRPSEPERRKPKGVRRTFKPVTVASGRETQSQIKILNAVMIGKSKSADKEGAARSTKASLAAYDAVEG--PHDPGAKRKKGKGAVGKAKKITKRR 163
            K+GK G +GALE  Q +TAS+G+FD       +RPS P R    G +R F  V  A G +      IL  +        ++  A R  K      D  +G  P++ G KRKKGK A GK+KKITK+R
Sbjct:  193 KKGKAGVKGALERAQVATASLGQFDAVVAGEGKRPSGPAR----GRKRQFLSVASARGSDAARASAILQDL--------ERPRAKRPGKGEAERMDTHDGELPNESGFKRKKGKAAAGKSKKITKKR 307          
BLAST of mRNA_H-elongata_contig86621.16221.1 vs. uniprot
Match: A0A3F2RMI9_9STRA (Ribosome biogenesis regulatory protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RMI9_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.510e-7
Identity = 51/114 (44.74%), Postives = 64/114 (56.14%), Query Frame = 0
Query:    8 AGGTPKPGIPVDLAPGRKDRSDGAAPRGGAKGGVASVKRGKDGTRGALEMVQHSTASMGKFDERRPSEPERRKPKGVRRTFKPVTVASGRETQSQIKILNAV--MIGKSKSADK 119
            AG TP  GIPV+L     +  D           V + +RGKDGT  ALE VQ STASMGKFD+ R  E ER K KG R  F P T   G ET  + + LNA+  ++G+ ++A K
Sbjct:  193 AGRTPT-GIPVELM----NTDD-----------VKAKQRGKDGTTKALEKVQFSTASMGKFDKMREGESER-KQKGKRNHFLPTT---GAETTEKERSLNALKHVLGREENAGK 286          
BLAST of mRNA_H-elongata_contig86621.16221.1 vs. uniprot
Match: A0A812RX42_SYMMI (Ribosome biogenesis regulatory protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RX42_SYMMI)

HSP 1 Score: 57.0 bits (136), Expect = 1.300e-6
Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 0
Query:   14 PGIPVDLAPGRKDRSDGAAPRGGAKGGVASVKRGKDGTRGALEMVQHSTASMGKFDERRPSEPERRKPKGVRRTFK 89
            PGIPV+L     + S G+ P        ++ KRGK G R AL++VQHSTASMG++DE R  EPE+ K +G +R+F+
Sbjct:  140 PGIPVNL-----ESSTGSDPS-------SNRKRGKQGVRSALQLVQHSTASMGRYDEVRYGEPEK-KIRGKKRSFR 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86621.16221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FMN3_ECTSI1.460e-6472.73Ribosome biogenesis regulatory protein n=2 Tax=Ect... [more]
A0A7S2UUR0_9STRA9.500e-2043.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0CHW9_9STRA5.440e-1144.20Ribosome biogenesis regulatory protein n=1 Tax=Pro... [more]
A0A7S4AIZ9_9STRA5.460e-938.86Ribosome biogenesis regulatory protein n=1 Tax=Pse... [more]
A0A7S3H4J0_9STRA1.330e-836.71Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7R9YG55_9STRA7.850e-837.27Ribosome biogenesis regulatory protein n=1 Tax=Pin... [more]
A0A484DXV0_BRELC2.410e-738.21Ribosome biogenesis regulatory protein n=1 Tax=Bre... [more]
A0A7S4ECG7_9STRA3.130e-739.37Ribosome biogenesis regulatory protein n=1 Tax=Pel... [more]
A0A3F2RMI9_9STRA4.510e-744.74Ribosome biogenesis regulatory protein n=3 Tax=Phy... [more]
A0A812RX42_SYMMI1.300e-647.37Ribosome biogenesis regulatory protein n=1 Tax=Sym... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86621contigH-elongata_contig86621:116..1457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86621.16221.1mRNA_H-elongata_contig86621.16221.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig86621 116..1457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig86621.16221.1 ID=prot_H-elongata_contig86621.16221.1|Name=mRNA_H-elongata_contig86621.16221.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bp
RAKNEERAGGTPKPGIPVDLAPGRKDRSDGAAPRGGAKGGVASVKRGKDG
TRGALEMVQHSTASMGKFDERRPSEPERRKPKGVRRTFKPVTVASGRETQ
SQIKILNAVMIGKSKSADKEGAARSTKASLAAYDAVEGPHDPGAKRKKGK
GAVGKAKKITKRRVK*
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