mRNA_H-elongata_contig86196.16196.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig86196.16196.1 vs. uniprot
Match: A0A835ZCJ6_9STRA (Anthranilate phosphoribosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCJ6_9STRA) HSP 1 Score: 333 bits (854), Expect = 3.680e-109 Identity = 170/232 (73.28%), Postives = 194/232 (83.62%), Query Frame = 3
Query: 117 PRSRLASTLKPYLEKLIDGQDLSAVDTEDAWVQIMEGAR-AEQVASMLCLMRMKGETATEIAGCVRGMRSFAVPVHVPGNMLDIAGTGGDGAHTINISTASVILAAAAGAQVCKFGNRSVSSMCGSADVLEALGINVNLTPEQVAECCAECGVAFMFAPNHYPAMKNVAPVRKALGIRTVFNILGPMTNPAGAQRVVIGVYHDSLLPLMARALQEVSTGINSGTYAFGWSLN 809
P +RL S+LKPYLEKLI GQDL+A DTEDAWVQIM+GA EQVA++LCL+R KGET+TE+AGCVRGM++ VPVHV G +LDI GTGGDGA TIN+STAS +LAAAAGA+VCKFGNRSVSSMCGSADVLEALGI+V LTP QV CC E GVAFM+AP HYPAMKNVAPVRKALG+RT FNILGPMT+PAGAQ VVIGV+ D L+PLMA AL+EV + G G L+
Sbjct: 53 PPARLHSSLKPYLEKLIAGQDLAAADTEDAWVQIMQGAAPTEQVAALLCLLRAKGETSTELAGCVRGMKASCVPVHVDGALLDIVGTGGDGADTINVSTASAVLAAAAGARVCKFGNRSVSSMCGSADVLEALGISVELTPTQVERCCQEAGVAFMYAPTHYPAMKNVAPVRKALGVRTAFNILGPMTSPAGAQHVVIGVFQDELMPLMAGALREVGY-VERGVIVHGCGLD 283
BLAST of mRNA_H-elongata_contig86196.16196.1 vs. uniprot
Match: D7FW59_ECTSI (Anthranilate Phosphoribosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW59_ECTSI) HSP 1 Score: 331 bits (849), Expect = 6.370e-109 Identity = 178/250 (71.20%), Postives = 208/250 (83.20%), Query Frame = 3
Query: 30 MRFIFAICFIIG-GKAFVHKLSPVHFAPVA---PRSR-LASTLKPYLEKLIDGQDLSAVDTEDAWVQIMEGARAEQVASMLCLMRMKGETATEIAGCVRGMRSFAVPVHVPGNMLDIAGTGGDGAHTINISTASVILAAAAGAQVCKFGNRSVSSMCGSADVLEALGINVNLTPEQVAECCAECGVAFMFAPNHYPAMKNVAPVRKALGIRTVFNILGPMTNPAGAQRVVIGVYHDSLLPLMARALQEVS 764
MRF + +++ +AFV V +PV+ P S L S+LKPYLEKLIDG +LSA D+E+A V IMEGA+AEQVA++LCL+RMKGETATEIAGCVRGM+S AVPVHV G++LDI GTGGDGAHTIN+STASVILAAAAGA+VCKFGNRSVSS+CGSADVLEALGI+V+LTPEQVAECC +C VAFMFAPNHYPAMKNVAPVRKALG+RT+FNILGPMTNPAGAQRVV + H ++ L E+S
Sbjct: 1 MRFAAVLLYLVAVARAFVPNFGAVR-SPVSTCRPCSLGLGSSLKPYLEKLIDGHELSAADSENALVSIMEGAKAEQVAALLCLLRMKGETATEIAGCVRGMKSVAVPVHVEGDLLDIVGTGGDGAHTINVSTASVILAAAAGAKVCKFGNRSVSSLCGSADVLEALGISVDLTPEQVAECCNDCNVAFMFAPNHYPAMKNVAPVRKALGVRTLFNILGPMTNPAGAQRVVGYIEHGVIVH--GAGLDEIS 247
BLAST of mRNA_H-elongata_contig86196.16196.1 vs. uniprot
Match: A0A7S1YUD4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YUD4_TRICV) HSP 1 Score: 250 bits (638), Expect = 4.290e-77 Identity = 132/212 (62.26%), Postives = 160/212 (75.47%), Query Frame = 3
Query: 129 LASTLKPYLEKLIDGQDLSAVDTEDAWVQIMEGARAEQVASMLCLMRMKGETATEIAGCVRGMRSFAVPVHVPGN-MLDIAGTGGDGAHTINISTASVILAAAAGAQVCKFGNRSVSSMCGSADVLEALGINVNLTPEQVAECCAECGVAFMFAPNHYPAMKNVAPVRKALGIRTVFNILGPMTNPAGAQRVVIGVYHDSLLPLMARALQEV 761
L +TLKPY++ LIDG+ L++ + E A+ +I+ GA QV S+L L+R +GET E+AG VR M V + +LDI GTGGDGA TINISTASV+LAAA G V K GNRSVSS CGSADVLEALG+ V+L PEQV +C +CGVAFM+AP ++PAMK VAPVRK LG+RT FNILGPMTN AGAQR VIGV+H+ L PLMA AL+ V
Sbjct: 15 LTATLKPYIQTLIDGEHLTSAEAESAFDEILSGADEVQVGSLLSLLRARGETPDELAGMVRAMNKACNAVDLGDRRLLDIVGTGGDGADTINISTASVVLAAACGCTVAKAGNRSVSSRCGSADVLEALGVQVDLNPEQVVQCVEKCGVAFMYAPVNHPAMKYVAPVRKKLGVRTCFNILGPMTNAAGAQRAVIGVFHEGLAPLMAGALRAV 226
BLAST of mRNA_H-elongata_contig86196.16196.1 vs. uniprot
Match: A0A7S2CV21_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CV21_9STRA) HSP 1 Score: 252 bits (644), Expect = 4.790e-77 Identity = 135/242 (55.79%), Postives = 172/242 (71.07%), Query Frame = 3
Query: 84 KLSPVHFAPVAPRSRLASTLKPYLEKLIDGQDLSAVDTEDAWVQIMEGARAEQVASMLCLMRMKGETATEIAGCVRGMRSFAVPVHVPGNMLDIAGTGGDGAHTINISTASVILAAAAGAQVCKFGNRSVSSMCGSADVLEALGINVNLTPEQVAECCAECGVAFMFAPNHYPAMKNVAPVRKALGIRTVFNILGPMTNPAGAQRVVIGVYHDSLLPLMARALQEVSTGINSGTYAFGWSLN 809
K++ A AP S A +LKPY+EKL+ G+ L+ + ++ I++GA QVAS L LMR GET E+AG V M+ VPV V G MLDI GTGGDGAHTINISTA+ +LAAA G + K GNRSVSS CGSADVLEALGI++ LT E V EC A+CG+ FMFAP ++PAMK V P+RKALG+R+VFNILGP+TN AGAQ VVIGV+ + L+ +MA +L E+ ++ G +G L+
Sbjct: 86 KVAVASAAVAAPPS--APSLKPYIEKLVAGESLTKEEAKEVCGAILQGADQIQVASCLMLMRRNGETPAEVAGFVAAMKEACVPVAVEGKMLDIVGTGGDGAHTINISTAAALLAAACGCKTAKAGNRSVSSQCGSADVLEALGISMALTAENVGECVAQCGMGFMFAPVNHPAMKMVVPIRKALGVRSVFNILGPLTNAAGAQHVVIGVFQEELIDIMANSLIEIGN-VDHGVVIYGVGLD 324
BLAST of mRNA_H-elongata_contig86196.16196.1 vs. uniprot
Match: A0A7S1DCB7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DCB7_CYCTE) HSP 1 Score: 249 bits (637), Expect = 1.120e-76 Identity = 136/228 (59.65%), Postives = 171/228 (75.00%), Query Frame = 3
Query: 90 SPV-HFAPVAPRSRLASTLKPYLEKLIDGQ-DLSAVDTEDAWVQIMEGARAEQVASMLCLMRMKGETATEIAGCVRGMRSFAVPVHVPGN-MLDIAGTGGDGAHTINISTASVILAAAAGAQVCKFGNRSVSSMCGSADVLEALGINVNLTPEQVAECCAECGVAFMFAPNHYPAMKNVAPVRKALGIRTVFNILGPMTNPAGAQRVVIGVYHDSLLPLMARALQEVS 764
SP+ F ++ R +TLKPY+E LI G+ L++ +TE A+ +I+ GA QV S+L L+R +GET +EIAG V+ M + V + +LDI GTGGDGA TINISTASV+L+AA G V K GNRSVSS CGSADVLEALG+ V+LTP+QV EC +C VAFMFAP ++PAMK+VAP+RK LG+RT FNILGPMTN AGAQR VIGV+H L+PLMA AL+EV+
Sbjct: 26 SPIPKFTRMSTTQRRQATLKPYIETLIGGERSLTSEETEAAFGEILSGADEVQVGSLLTLLRARGETPSEIAGMVKAMNAACNAVDLGDKKLLDIVGTGGDGADTINISTASVVLSAACGCTVAKAGNRSVSSRCGSADVLEALGVKVDLTPDQVVECVEKCNVAFMFAPVNHPAMKHVAPIRKKLGVRTCFNILGPMTNAAGAQRAVIGVFHPELMPLMAGALKEVA 253
BLAST of mRNA_H-elongata_contig86196.16196.1 vs. uniprot
Match: A0A7S4QNE5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QNE5_9STRA) HSP 1 Score: 245 bits (626), Expect = 4.330e-76 Identity = 136/221 (61.54%), Postives = 163/221 (73.76%), Query Frame = 3
Query: 105 APVAPRSRLASTLKPYLEKLIDGQ-DLSAVDTEDAWVQIMEGARAEQVASMLCLMRMKGETATEIAGCVRGMRSFAVPVHVP-GNMLDIAGTGGDGAHTINISTASVILAAAAGAQVCKFGNRSVSSMCGSADVLEALGINVNLTPEQVAECCAECGVAFMFAPNHYPAMKNVAPVRKALGIRTVFNILGPMTNPAGAQRVVIGVYHDSLLPLMARALQEV 761
AP+ AS LKPY+E LI+G+ L++ + A+ +I+ GA A QV S+L L+R +GET EIAG VR M V +P +LDI GTGGDGA TINISTASV+LAAAAG V K GNRSVSS CGSADVLE LG+ V+L PEQV +C AECGVAFMFAP ++P+M++VAPVRK LG+RT FNILGPMTN A AQR VIGV+H L PLMA AL+ V
Sbjct: 49 APLRTTMTTAS-LKPYIETLIEGERHLTSDEAHAAFTEILAGADAVQVGSLLTLLRARGETPEEIAGMVRAMNDACNAVKIPDAKLLDIVGTGGDGADTINISTASVVLAAAAGCTVAKAGNRSVSSACGSADVLETLGVAVDLQPEQVVQCVAECGVAFMFAPVNHPSMRHVAPVRKKLGVRTCFNILGPMTNAASAQRAVIGVFHGDLAPLMAGALKSV 268
BLAST of mRNA_H-elongata_contig86196.16196.1 vs. uniprot
Match: A0A7S2HRI9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HRI9_9STRA) HSP 1 Score: 248 bits (632), Expect = 1.040e-75 Identity = 132/239 (55.23%), Postives = 169/239 (70.71%), Query Frame = 3
Query: 93 PVHFAPVAPRSRLASTLKPYLEKLIDGQDLSAVDTEDAWVQIMEGARAEQVASMLCLMRMKGETATEIAGCVRGMRSFAVPVHVPGNMLDIAGTGGDGAHTINISTASVILAAAAGAQVCKFGNRSVSSMCGSADVLEALGINVNLTPEQVAECCAECGVAFMFAPNHYPAMKNVAPVRKALGIRTVFNILGPMTNPAGAQRVVIGVYHDSLLPLMARALQEVSTGINSGTYAFGWSLN 809
P+ AP + ++LKP+LEKL+ G+ LS + A I++GA QV+++L LMR GE+ E+AG V M VPV V G MLDI GTGGDGAHTINISTA+ ILAAA G + K GNRSVSS CGSADVLEALG+++ LT +Q+ EC CG+ FM+AP ++PAM+ VAP+RK+LG+R+VFNILGP+TN AGAQRVVIGV+ + LL MA AL EV ++ G FG L+
Sbjct: 48 PLRSAPPQAPAIPVTSLKPFLEKLVAGESLSFDEARAACSSILQGADQLQVSALLMLMRRNGESPAEVAGFVAAMTDACVPVKVSGKMLDIVGTGGDGAHTINISTAAAILAAACGCKTSKAGNRSVSSQCGSADVLEALGVSLTLTADQMGECVEACGMGFMYAPVNHPAMRMVAPIRKSLGVRSVFNILGPLTNAAGAQRVVIGVFTEDLLETMANALIEVGK-VDHGVIVFGVGLD 285
BLAST of mRNA_H-elongata_contig86196.16196.1 vs. uniprot
Match: A0A7S4QLM7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QLM7_9STRA) HSP 1 Score: 245 bits (626), Expect = 7.810e-75 Identity = 136/221 (61.54%), Postives = 163/221 (73.76%), Query Frame = 3
Query: 105 APVAPRSRLASTLKPYLEKLIDGQ-DLSAVDTEDAWVQIMEGARAEQVASMLCLMRMKGETATEIAGCVRGMRSFAVPVHVP-GNMLDIAGTGGDGAHTINISTASVILAAAAGAQVCKFGNRSVSSMCGSADVLEALGINVNLTPEQVAECCAECGVAFMFAPNHYPAMKNVAPVRKALGIRTVFNILGPMTNPAGAQRVVIGVYHDSLLPLMARALQEV 761
AP+ AS LKPY+E LI+G+ L++ + A+ +I+ GA A QV S+L L+R +GET EIAG VR M V +P +LDI GTGGDGA TINISTASV+LAAAAG V K GNRSVSS CGSADVLE LG+ V+L PEQV +C AECGVAFMFAP ++P+M++VAPVRK LG+RT FNILGPMTN A AQR VIGV+H L PLMA AL+ V
Sbjct: 49 APLRTTMTTAS-LKPYIETLIEGERHLTSDEAHAAFTEILAGADAVQVGSLLTLLRARGETPEEIAGMVRAMNDACNAVKIPDAKLLDIVGTGGDGADTINISTASVVLAAAAGCTVAKAGNRSVSSACGSADVLETLGVAVDLQPEQVVQCVAECGVAFMFAPVNHPSMRHVAPVRKKLGVRTCFNILGPMTNAASAQRAVIGVFHGDLAPLMAGALKSV 268
BLAST of mRNA_H-elongata_contig86196.16196.1 vs. uniprot
Match: A0A7S2RLD9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLD9_9STRA) HSP 1 Score: 245 bits (625), Expect = 1.540e-74 Identity = 129/232 (55.60%), Postives = 166/232 (71.55%), Query Frame = 3
Query: 114 APRSRLASTLKPYLEKLIDGQDLSAVDTEDAWVQIMEGARAEQVASMLCLMRMKGETATEIAGCVRGMRSFAVPVHVPGNMLDIAGTGGDGAHTINISTASVILAAAAGAQVCKFGNRSVSSMCGSADVLEALGINVNLTPEQVAECCAECGVAFMFAPNHYPAMKNVAPVRKALGIRTVFNILGPMTNPAGAQRVVIGVYHDSLLPLMARALQEVSTGINSGTYAFGWSLN 809
A + A +LKPYLE+L+ G+ LS D ++ I++GA QVAS+L LMR GET E+AG V M+ VPV V G +LDI GTGGDGAHTINISTA+ ILAAA G + K GNRSVSS CGSADVLEALG+ ++L+ +QV C + GV FM+AP ++PAM+ VAP+RKALG+R+VFN+LGPMTN AGAQ VVIGV+ + L+ +MA +L E+ I+ G G L+
Sbjct: 63 ATSTSTAPSLKPYLERLVAGESLSKEDAKEVCGAILQGADQLQVASLLMLMRRNGETPAEVAGFVAAMKDACVPVSVAGKLLDIVGTGGDGAHTINISTAAAILAAACGCKTAKAGNRSVSSKCGSADVLEALGVAIDLSADQVGTCVEKSGVGFMYAPVNHPAMRLVAPIRKALGVRSVFNLLGPMTNAAGAQHVVIGVFTEDLMDIMANSLMEIGN-IDHGVVIHGVGLD 293
BLAST of mRNA_H-elongata_contig86196.16196.1 vs. uniprot
Match: K8YW28_NANGC (Anthranilate phosphoribosyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YW28_NANGC) HSP 1 Score: 237 bits (605), Expect = 4.400e-72 Identity = 122/211 (57.82%), Postives = 154/211 (72.99%), Query Frame = 3
Query: 135 STLKPYLEKLIDGQDLSAVDTEDAWVQIMEGARAEQVASMLCLMRMKGETATEIAGCVRGMRSFAVPVHVPGNMLDIAGTGGDGAHTINISTASVILAAAAGAQVCKFGNRSVSSMCGSADVLEALGINVNLTPEQVAECCAECGVAFMFAPNHYPAMKNVAPVRKALGIRTVFNILGPMTNPAGAQRVVIGVYHDSLLPLMARALQEVST 767
++LKP+LE +I G LS+ D E A+ +I+ G+ QV ++L ++R +GET EIAG VR M PV+V G +LDI GTGGDGAHTINISTA++ILAAA G + K GNRSVSS CGSADVLE LGI++ LT EQVAEC GV FMFAP +P MK VAP+RKALG+RT FNI+GP+ N AGAQ V+GV+ + LL ++A L E+ T
Sbjct: 27 TSLKPFLEHIIAGASLSSSDVEAAFDRILAGSDPVQVGALLAMLRQRGETPVEIAGMVRAMLKQRYPVNVTGKLLDIVGTGGDGAHTINISTAAIILAAACGCKAAKLGNRSVSSKCGSADVLETLGIDMELTAEQVAECIETTGVGFMFAPVVHPTMKKVAPIRKALGVRTAFNIVGPLLNAAGAQHAVVGVFQERLLDVLAGTLGEIGT 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86196.16196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig86196.16196.1 >prot_H-elongata_contig86196.16196.1 ID=prot_H-elongata_contig86196.16196.1|Name=mRNA_H-elongata_contig86196.16196.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=272bp MSLHIARMRFIFAICFIIGGKAFVHKLSPVHFAPVAPRSRLASTLKPYLEback to top mRNA from alignment at H-elongata_contig86196:1116..2331- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig86196.16196.1 ID=mRNA_H-elongata_contig86196.16196.1|Name=mRNA_H-elongata_contig86196.16196.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1216bp|location=Sequence derived from alignment at H-elongata_contig86196:1116..2331- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig86196:1116..2331- >mRNA_H-elongata_contig86196.16196.1 ID=mRNA_H-elongata_contig86196.16196.1|Name=mRNA_H-elongata_contig86196.16196.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1632bp|location=Sequence derived from alignment at H-elongata_contig86196:1116..2331- (Himanthalia elongata Himel1 dioecious)back to top |