mRNA_H-elongata_contig85214.16110.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig85214.16110.1 vs. uniprot
Match: D7G7J8_ECTSI (Nucleolar complex associated 2 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7J8_ECTSI) HSP 1 Score: 108 bits (269), Expect = 1.130e-25 Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 1
Query: 1 ELRMLIFPLSQVIGGVLRLCPTLRHSPLLFQLVRMRQRLAAATEVYVPCSKPLLEVLRSPALFKKA 198
ELRMLIFPL+QVI G++RL TLRHSPL+FQLVRMRQRLAAA E+YVPC+ PLLEV+RSPALFKKA
Sbjct: 631 ELRMLIFPLAQVIEGIVRLSATLRHSPLVFQLVRMRQRLAAAAELYVPCATPLLEVIRSPALFKKA 696
BLAST of mRNA_H-elongata_contig85214.16110.1 vs. uniprot
Match: A0A3M7NF59_9EURO (Uncharacterized protein (Fragment) n=2 Tax=unclassified Chaetothyriales TaxID=316340 RepID=A0A3M7NF59_9EURO) HSP 1 Score: 64.7 bits (156), Expect = 2.180e-10 Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 1 ELRMLIFPLSQVIGGVLRLCPTLRHSPLLFQLVRMRQRLAAATEVYVPCSKPLLEVLRSPALFKKAREAHL 213
+LR LI+PL+QV GV+RL PT + PL F L+R R++ AT Y+P S LLEVL SP L + A+ A L
Sbjct: 471 QLRPLIYPLTQVTLGVMRLIPTSTYFPLRFLLIRSLLRISNATGTYIPLSSALLEVLNSPELKRPAKPATL 541
BLAST of mRNA_H-elongata_contig85214.16110.1 vs. uniprot
Match: R7YZE9_CONA1 (Uncharacterized protein n=1 Tax=Coniosporium apollinis (strain CBS 100218) TaxID=1168221 RepID=R7YZE9_CONA1) HSP 1 Score: 62.8 bits (151), Expect = 1.040e-9 Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 1 ELRMLIFPLSQVIGGVLRLCPTLRHSPLLFQLVRMRQRLAAATEVYVPCSKPLLEVLRSPALFKKAREAHLE 216
ELR L++P++QV G +RL PT ++ PL FQLVR RL+ AT VY+P + LLEVL S + K + + L+
Sbjct: 503 ELRPLVYPVTQVTLGAMRLIPTAQYFPLRFQLVRSLLRLSRATGVYIPLAPALLEVLSSAEMKKSPKPSTLK 574
BLAST of mRNA_H-elongata_contig85214.16110.1 vs. uniprot
Match: A0A6A6CA99_9PEZI (Uncharacterized protein n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6CA99_9PEZI) HSP 1 Score: 60.1 bits (144), Expect = 9.290e-9 Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 4 LRMLIFPLSQVIGGVLRLCPTLRHSPLLFQLVRMRQRLAAATEVYVPCSKPLLEVLRSPALFKKAREAHLE 216
LR LI+PL+QV G LRL PT + PL FQL+R R++ AT Y+P + PL EVL S + K + + L+
Sbjct: 482 LRPLIYPLTQVTLGALRLIPTATYFPLRFQLIRSLLRVSLATNTYIPLAAPLHEVLNSAEMRKAPKASTLK 552
BLAST of mRNA_H-elongata_contig85214.16110.1 vs. uniprot
Match: UPI000CE1FF21 (nucleolar complex protein 2-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1FF21) HSP 1 Score: 59.7 bits (143), Expect = 1.270e-8 Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 4 LRMLIFPLSQVIGGVLRLCPTLRHSPLLFQLVRMRQRLAAATEVYVPCSKPLLEVLRSPALFKKAREAHLE 216
L LI+PL+QV G LRL PT + PL FQL R R++ AT Y+P + PL EVL S + K + A L+
Sbjct: 490 LHPLIYPLTQVTLGALRLIPTATYFPLRFQLTRSLLRMSLATNTYIPLAAPLYEVLNSSEMRKAPKAASLK 560
BLAST of mRNA_H-elongata_contig85214.16110.1 vs. uniprot
Match: UPI000CE17DDE (uncharacterized NOC2 family protein C1142.04-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE17DDE) HSP 1 Score: 59.7 bits (143), Expect = 1.270e-8 Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 4 LRMLIFPLSQVIGGVLRLCPTLRHSPLLFQLVRMRQRLAAATEVYVPCSKPLLEVLRSPALFKKAREAHLE 216
L LI+PL+QV G LRL PT + PL FQL R R++ AT Y+P + PL EVL S + K + A L+
Sbjct: 490 LHPLIYPLTQVTLGALRLIPTATYFPLRFQLTRSLLRMSLATNTYIPLAAPLYEVLNSAEMRKPPKAASLK 560
BLAST of mRNA_H-elongata_contig85214.16110.1 vs. uniprot
Match: A0A2C5YF95_9HYPO (Uncharacterized protein n=1 Tax=Ophiocordyceps australis TaxID=1399860 RepID=A0A2C5YF95_9HYPO) HSP 1 Score: 58.9 bits (141), Expect = 2.380e-8 Identity = 30/72 (41.67%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 1 ELRMLIFPLSQVIGGVLRLCPTLRHSPLLFQLVRMRQRLAAATEVYVPCSKPLLEVLRSPALFKKAREAHLE 216
+L++LI+PL+Q+ G +RL PT + PL F L+ RL+ AT +Y+P + PLLE L S L K+ + + L+
Sbjct: 517 QLKLLIYPLTQLTLGAMRLIPTAAYFPLRFMLIGSLLRLSRATGIYMPLASPLLEALSSAELRKRPKPSTLK 588
BLAST of mRNA_H-elongata_contig85214.16110.1 vs. uniprot
Match: A0A3N4L0Q1_9PEZI (Noc2-domain-containing protein n=3 Tax=Morchella TaxID=5193 RepID=A0A3N4L0Q1_9PEZI) HSP 1 Score: 58.5 bits (140), Expect = 3.250e-8 Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 4 LRMLIFPLSQVIGGVLRLCPTLRHSPLLFQLVRMRQRLAAATEVYVPCSKPLLEVLRSPALFKKAREAHLE 216
LR LI+PL QV G +RL PT ++ PL F L R R++ AT+VY+P S + EVL S L KK + + L+
Sbjct: 522 LRPLIYPLIQVTLGAIRLIPTAQYFPLRFYLTRSLLRISRATDVYIPLSPLIFEVLSSAELKKKPKPSTLK 592
BLAST of mRNA_H-elongata_contig85214.16110.1 vs. uniprot
Match: A0A2C5ZM19_9HYPO (Uncharacterized protein n=1 Tax=Ophiocordyceps australis TaxID=1399860 RepID=A0A2C5ZM19_9HYPO) HSP 1 Score: 57.8 bits (138), Expect = 6.070e-8 Identity = 30/72 (41.67%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 1 ELRMLIFPLSQVIGGVLRLCPTLRHSPLLFQLVRMRQRLAAATEVYVPCSKPLLEVLRSPALFKKAREAHLE 216
+L++L++PL+Q+ G +RL PT + PL F L+ RL+ AT VY+P + PLLE L S L K+ + + L+
Sbjct: 517 QLKLLVYPLTQLTLGAMRLIPTAAYFPLRFILIGSLLRLSRATGVYMPLASPLLEALSSAELRKRPKPSTLK 588
BLAST of mRNA_H-elongata_contig85214.16110.1 vs. uniprot
Match: A0A6G1H672_9PEZI (Nucleolar complex protein 2 n=1 Tax=Aulographum hederae CBS 113979 TaxID=1176131 RepID=A0A6G1H672_9PEZI) HSP 1 Score: 57.8 bits (138), Expect = 6.070e-8 Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 4 LRMLIFPLSQVIGGVLRLCPTLRHSPLLFQLVRMRQRLAAATEVYVPCSKPLLEVLRSPALFKKAREAHL 213
LR L++P++QV G +RL PT ++ PL FQLVR RL+ AT Y+P + L EVL S + K +++ L
Sbjct: 499 LRPLVYPVTQVTLGAMRLIPTAQYFPLRFQLVRALLRLSRATGTYIPLAASLYEVLNSAEMRKAPKQSTL 568 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85214.16110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig85214.16110.1 >prot_H-elongata_contig85214.16110.1 ID=prot_H-elongata_contig85214.16110.1|Name=mRNA_H-elongata_contig85214.16110.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp MLIFPLSQVIGGVLRLCPTLRHSPLLFQLVRMRQRLAAATEVYVPCSKPLback to top mRNA from alignment at H-elongata_contig85214:1105..2194+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig85214.16110.1 ID=mRNA_H-elongata_contig85214.16110.1|Name=mRNA_H-elongata_contig85214.16110.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1090bp|location=Sequence derived from alignment at H-elongata_contig85214:1105..2194+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig85214:1105..2194+ >mRNA_H-elongata_contig85214.16110.1 ID=mRNA_H-elongata_contig85214.16110.1|Name=mRNA_H-elongata_contig85214.16110.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at H-elongata_contig85214:1105..2194+ (Himanthalia elongata Himel1 dioecious)back to top |