prot_H-elongata_contig84371.16051.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84371.16051.1
Unique Nameprot_H-elongata_contig84371.16051.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: D7G9D3_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D3_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 1.850e-86
Identity = 123/138 (89.13%), Postives = 128/138 (92.75%), Query Frame = 0
Query:    1 MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECVSEA 138
            M IMM ADPGASAFPNDDNLFEWTATL G +DTAY+GLTYKLKLVFP+TYPYK PLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNN+SPLNTEAA LWADQ+KYRQVC QKYQE   EA
Sbjct:   17 MGIMMGADPGASAFPNDDNLFEWTATLCGSEDTAYEGLTYKLKLVFPDTYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNESPLNTEAAQLWADQDKYRQVCKQKYQEGAGEA 154          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A9T770_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T770_PHYPA)

HSP 1 Score: 186 bits (473), Expect = 7.370e-58
Identity = 81/136 (59.56%), Postives = 109/136 (80.15%), Query Frame = 0
Query:    1 MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECVS 136
            MS+MMS DPG SAFP  DN+F W  T+KG + T Y+GL+YKL L FP  YP+KPP++ F+T CFHPNVD+ GNICLDIL++KWSSA+ V T+L S++SLL +PNNDSPLN+ AA LW+DQE+Y++V  ++Y++  +
Sbjct:   46 MSLMMSGDPGISAFPEGDNIFSWIGTIKGSNGTVYEGLSYKLTLKFPTDYPFKPPVVKFDTLCFHPNVDQFGNICLDILQDKWSSAYDVRTVLLSIQSLLGEPNNDSPLNSYAAALWSDQEEYKKVMRKQYRDAAA 181          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A5J4Y1P3_9CHLO (Ubiquitin-conjugating enzyme E2 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y1P3_9CHLO)

HSP 1 Score: 186 bits (472), Expect = 7.610e-58
Identity = 80/133 (60.15%), Postives = 106/133 (79.70%), Query Frame = 0
Query:    1 MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQE 133
            MS+M + DPG SAFP+ D+LF W  T++G  DT Y+G++YKL L FP  YP+K P + FETPCFHPN+D++GNICLDILK+KWS+A+SV T+L S++SLL +PNNDSPLN+ AA LW  QE Y++V ++KY E
Sbjct:   39 MSLMSATDPGVSAFPDGDSLFSWVGTIQGAADTVYEGMSYKLSLKFPTDYPFKAPTVKFETPCFHPNIDQYGNICLDILKDKWSAAYSVRTVLLSIQSLLGEPNNDSPLNSYAAKLWESQEDYKRVLIKKYAE 171          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A8J4ZIV0_9CHEL (Ubiquitin-conjugating enzyme E2 C n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZIV0_9CHEL)

HSP 1 Score: 186 bits (472), Expect = 8.920e-58
Identity = 80/135 (59.26%), Postives = 107/135 (79.26%), Query Frame = 0
Query:    1 MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECV 135
            M++MMS D G SAFP+ DNLF+W  T+KG D+T Y+GL+YKL L FP  YPY+PP++ F+TPCFHPNVD+ GNICLDILKEKWS+ + V ++L S++SLL +PNN SPLN +AA LW++Q+ YR+V  +KY +  
Sbjct:   42 MTLMMSGDKGISAFPDSDNLFKWIGTIKGADNTVYEGLSYKLSLEFPSGYPYQPPIVKFDTPCFHPNVDQFGNICLDILKEKWSALYDVRSVLLSIQSLLGEPNNASPLNLQAAELWSNQDVYRKVLKEKYSKAT 176          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: I1HED7_BRADI (UBC core domain-containing protein n=11 Tax=Pooideae TaxID=147368 RepID=I1HED7_BRADI)

HSP 1 Score: 186 bits (472), Expect = 9.510e-58
Identity = 82/131 (62.60%), Postives = 104/131 (79.39%), Query Frame = 0
Query:    1 MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKY 131
            M++MM  DPG SAFP  DN+F+W  T+ G   TAY+G +Y+L L FP  YPYKPP + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LWA+QE++R++  + Y
Sbjct:   48 MALMMGGDPGVSAFPEGDNIFQWVGTIDGSAATAYEGTSYRLALSFPSDYPYKPPKVKFETPCFHPNVDTHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWANQEEFRKMVEKLY 178          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A5A8DJT4_CAFRO (UBC core domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DJT4_CAFRO)

HSP 1 Score: 186 bits (471), Expect = 1.190e-57
Identity = 81/135 (60.00%), Postives = 107/135 (79.26%), Query Frame = 0
Query:    1 MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECV 135
            M ++M+A+PG SAFP  DNLFEW  T+ G  +T ++G+ ++++LVFP  YP+K P +TFETP FHPNVDE GNICLDILKE+WS+A+SV T+L S+RSLL +PNNDSPLN  AA LW +Q +YR+VC+ KY+E  
Sbjct:   38 MQLVMAAEPGVSAFPAGDNLFEWIGTIDGSKETVFEGMKFQMRLVFPAQYPFKAPQVTFETPVFHPNVDESGNICLDILKEEWSAAYSVKTLLVSIRSLLGEPNNDSPLNAHAAGLWDNQAEYRRVCVAKYEEAT 172          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A2WNC8_ORYSI (UBC core domain-containing protein n=1 Tax=Oryza sativa subsp. indica TaxID=39946 RepID=A2WNC8_ORYSI)

HSP 1 Score: 184 bits (467), Expect = 1.260e-57
Identity = 81/131 (61.83%), Postives = 103/131 (78.63%), Query Frame = 0
Query:    1 MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKY 131
            M++MM ADPG SAFP  DN+F W  T+ G   TAY+G +Y+L L FP  YPYKPP + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LW +Q+++R++  + Y
Sbjct:    1 MALMMGADPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWPNQDEFRKMVEKLY 131          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: C3YEG7_BRAFL (UBC core domain-containing protein n=3 Tax=Branchiostoma TaxID=7737 RepID=C3YEG7_BRAFL)

HSP 1 Score: 186 bits (471), Expect = 1.350e-57
Identity = 84/135 (62.22%), Postives = 104/135 (77.04%), Query Frame = 0
Query:    1 MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECV 135
            M +MMS D G SAFP+ D+LF WT TL G   T Y+GL YKL L FP+ YPYKPP + FETPCFHPNVDEHGNICLDILKEKWS+ + V T+L S++SLL +PNNDSPLN  AA LW +Q +Y++  L++Y++ V
Sbjct:   41 MGLMMSDDKGISAFPSGDSLFNWTGTLTGPLGTVYEGLQYKLSLEFPQGYPYKPPTVRFETPCFHPNVDEHGNICLDILKEKWSALYDVRTVLLSIQSLLGEPNNDSPLNVHAAGLWENQTEYKKTLLERYEKDV 175          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A4Y2NTP1_ARAVE (Ubiquitin-conjugating enzyme E2 C n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2NTP1_ARAVE)

HSP 1 Score: 184 bits (466), Expect = 2.160e-57
Identity = 82/138 (59.42%), Postives = 104/138 (75.36%), Query Frame = 0
Query:    1 MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECVSEA 138
            M++MMS D G SAFP+++N+F W  T+ G   T Y+GLTYKLKL FP  YPY PP + F TPCFHPNVD+HGNICLDILKEKW++ + V TIL SL+SLLA+PN DSPLN +AA +W DQ  Y+ +  +KY+  V +A
Sbjct:    1 MTLMMSGDKGISAFPSEENIFNWIGTINGAQGTVYEGLTYKLKLDFPNNYPYSPPHVRFTTPCFHPNVDDHGNICLDILKEKWTALYDVRTILLSLQSLLAEPNIDSPLNIQAAQMWKDQLSYKVILHEKYENDVRKA 138          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A2R5GGQ9_9STRA (Ubiquitin-conjugating enzyme E2 C n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGQ9_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.550e-57
Identity = 84/133 (63.16%), Postives = 101/133 (75.94%), Query Frame = 0
Query:    1 MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQE 133
            M +M   D  A+AFP+ DNLF W+  + G  +T Y+GL+YKL + FP  YPY  P I F TPCFHPNVD HGNICLDILKEKWS+ +SVSTIL SLRSLL+DPNNDSPLN  AA LW +QE+Y++V L+KY E
Sbjct:   21 MQLMRDGDSNATAFPDGDNLFSWSGNINGAPETVYEGLSYKLHIDFPSNYPYTAPTIRFVTPCFHPNVDAHGNICLDILKEKWSATYSVSTILTSLRSLLSDPNNDSPLNGVAAQLWDNQEEYKRVLLKKYDE 153          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9D3_ECTSI1.850e-8689.13UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A9T770_PHYPA7.370e-5859.56Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A5J4Y1P3_9CHLO7.610e-5860.15Ubiquitin-conjugating enzyme E2 n=1 Tax=Trebouxia ... [more]
A0A8J4ZIV0_9CHEL8.920e-5859.26Ubiquitin-conjugating enzyme E2 C n=1 Tax=Nymphon ... [more]
I1HED7_BRADI9.510e-5862.60UBC core domain-containing protein n=11 Tax=Pooide... [more]
A0A5A8DJT4_CAFRO1.190e-5760.00UBC core domain-containing protein n=2 Tax=Cafeter... [more]
A2WNC8_ORYSI1.260e-5761.83UBC core domain-containing protein n=1 Tax=Oryza s... [more]
C3YEG7_BRAFL1.350e-5762.22UBC core domain-containing protein n=3 Tax=Branchi... [more]
A0A4Y2NTP1_ARAVE2.160e-5759.42Ubiquitin-conjugating enzyme E2 C n=2 Tax=Araneus ... [more]
A0A2R5GGQ9_9STRA2.550e-5763.16Ubiquitin-conjugating enzyme E2 C n=1 Tax=Hondaea ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 1..136
e-value: 4.8E-48
score: 175.6
NoneNo IPR availablePANTHERPTHR24068:SF223coord: 1..127
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 1..127
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 6..126
e-value: 1.9E-42
score: 144.2
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 1..126
score: 34.079
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..137
e-value: 3.3E-54
score: 184.6
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 3..130
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 64..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84371contigH-elongata_contig84371:786..1940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84371.16051.1mRNA_H-elongata_contig84371.16051.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84371 2..2714 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84371.16051.1 ID=prot_H-elongata_contig84371.16051.1|Name=mRNA_H-elongata_contig84371.16051.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETY
PYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLL
ADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECVSEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS