mRNA_H-elongata_contig84371.16051.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig84371.16051.1
Unique NamemRNA_H-elongata_contig84371.16051.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: D7G9D3_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D3_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 6.230e-84
Identity = 129/144 (89.58%), Postives = 134/144 (93.06%), Query Frame = 1
Query:  757 RLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECVSEA 1188
            RLQQELM IMM ADPGASAFPNDDNLFEWTATL G +DTAY+GLTYKLKLVFP+TYPYK PLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNN+SPLNTEAA LWADQ+KYRQVC QKYQE   EA
Sbjct:   11 RLQQELMGIMMGADPGASAFPNDDNLFEWTATLCGSEDTAYEGLTYKLKLVFPDTYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNESPLNTEAAQLWADQDKYRQVCKQKYQEGAGEA 154          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A9T770_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T770_PHYPA)

HSP 1 Score: 198 bits (503), Expect = 3.510e-56
Identity = 88/150 (58.67%), Postives = 118/150 (78.67%), Query Frame = 1
Query:  739 SYLYNLRLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECVSEA 1188
            S+  + RLQ ELMS+MMS DPG SAFP  DN+F W  T+KG + T Y+GL+YKL L FP  YP+KPP++ F+T CFHPNVD+ GNICLDIL++KWSSA+ V T+L S++SLL +PNNDSPLN+ AA LW+DQE+Y++V  ++Y++  + A
Sbjct:   34 SHSVSRRLQSELMSLMMSGDPGISAFPEGDNIFSWIGTIKGSNGTVYEGLSYKLTLKFPTDYPFKPPVVKFDTLCFHPNVDQFGNICLDILQDKWSSAYDVRTVLLSIQSLLGEPNNDSPLNSYAAALWSDQEEYKKVMRKQYRDAAALA 183          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: C3YEG7_BRAFL (UBC core domain-containing protein n=3 Tax=Branchiostoma TaxID=7737 RepID=C3YEG7_BRAFL)

HSP 1 Score: 197 bits (502), Expect = 4.450e-56
Identity = 90/147 (61.22%), Postives = 112/147 (76.19%), Query Frame = 1
Query:  739 SYLYNLRLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECV 1179
             +  + RLQQELM +MMS D G SAFP+ D+LF WT TL G   T Y+GL YKL L FP+ YPYKPP + FETPCFHPNVDEHGNICLDILKEKWS+ + V T+L S++SLL +PNNDSPLN  AA LW +Q +Y++  L++Y++ V
Sbjct:   29 KHTVSRRLQQELMGLMMSDDKGISAFPSGDSLFNWTGTLTGPLGTVYEGLQYKLSLEFPQGYPYKPPTVRFETPCFHPNVDEHGNICLDILKEKWSALYDVRTVLLSIQSLLGEPNNDSPLNVHAAGLWENQTEYKKTLLERYEKDV 175          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A5J4Y1P3_9CHLO (Ubiquitin-conjugating enzyme E2 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y1P3_9CHLO)

HSP 1 Score: 197 bits (501), Expect = 4.960e-56
Identity = 86/145 (59.31%), Postives = 113/145 (77.93%), Query Frame = 1
Query:  739 SYLYNLRLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQE 1173
            S+    RLQ ELMS+M + DPG SAFP+ D+LF W  T++G  DT Y+G++YKL L FP  YP+K P + FETPCFHPN+D++GNICLDILK+KWS+A+SV T+L S++SLL +PNNDSPLN+ AA LW  QE Y++V ++KY E
Sbjct:   27 SHAVTKRLQSELMSLMSATDPGVSAFPDGDSLFSWVGTIQGAADTVYEGMSYKLSLKFPTDYPFKAPTVKFETPCFHPNIDQYGNICLDILKDKWSAAYSVRTVLLSIQSLLGEPNNDSPLNSYAAKLWESQEDYKRVLIKKYAE 171          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A8J4ZIV0_9CHEL (Ubiquitin-conjugating enzyme E2 C n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZIV0_9CHEL)

HSP 1 Score: 197 bits (500), Expect = 8.130e-56
Identity = 86/151 (56.95%), Postives = 117/151 (77.48%), Query Frame = 1
Query:  727 P*HCSYLYNLRLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECV 1179
            P   ++  + RLQ+ELM++MMS D G SAFP+ DNLF+W  T+KG D+T Y+GL+YKL L FP  YPY+PP++ F+TPCFHPNVD+ GNICLDILKEKWS+ + V ++L S++SLL +PNN SPLN +AA LW++Q+ YR+V  +KY +  
Sbjct:   26 PKQENHSVSKRLQKELMTLMMSGDKGISAFPDSDNLFKWIGTIKGADNTVYEGLSYKLSLEFPSGYPYQPPIVKFDTPCFHPNVDQFGNICLDILKEKWSALYDVRSVLLSIQSLLGEPNNASPLNLQAAELWSNQDVYRKVLKEKYSKAT 176          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A2R5GGQ9_9STRA (Ubiquitin-conjugating enzyme E2 C n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGQ9_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.080e-55
Identity = 90/139 (64.75%), Postives = 107/139 (76.98%), Query Frame = 1
Query:  757 RLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQE 1173
            RLQQELM +M   D  A+AFP+ DNLF W+  + G  +T Y+GL+YKL + FP  YPY  P I F TPCFHPNVD HGNICLDILKEKWS+ +SVSTIL SLRSLL+DPNNDSPLN  AA LW +QE+Y++V L+KY E
Sbjct:   15 RLQQELMQLMRDGDSNATAFPDGDNLFSWSGNINGAPETVYEGLSYKLHIDFPSNYPYTAPTIRFVTPCFHPNVDAHGNICLDILKEKWSATYSVSTILTSLRSLLSDPNNDSPLNGVAAQLWDNQEEYKRVLLKKYDE 153          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A6J8EP90_MYTCO (UBE2C n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8EP90_MYTCO)

HSP 1 Score: 196 bits (498), Expect = 1.690e-55
Identity = 89/149 (59.73%), Postives = 116/149 (77.85%), Query Frame = 1
Query:  739 SYLYNLRLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECVSE 1185
            ++  + RLQQELM+++ S DPG SAFP++DNLF+W AT+ G   T YDGL YKL L FP  YPY+ P + FE+PC+HPNVD+HGNICLDILKEKWS+ + V TIL SL+SLL +PN DSPLN +AA LW +QE Y++V L+KY + V++
Sbjct:   30 NHSVSKRLQQELMTLLTSGDPGISAFPDNDNLFKWIATVNGAKGTVYDGLRYKLTLDFPSGYPYQAPTVRFESPCYHPNVDKHGNICLDILKEKWSALYDVRTILLSLQSLLGEPNIDSPLNVQAADLWKNQEGYKKVLLEKYDQEVTK 178          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: I1HED7_BRADI (UBC core domain-containing protein n=11 Tax=Pooideae TaxID=147368 RepID=I1HED7_BRADI)

HSP 1 Score: 196 bits (497), Expect = 2.350e-55
Identity = 87/138 (63.04%), Postives = 110/138 (79.71%), Query Frame = 1
Query:  757 RLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQ 1170
            RLQ ELM++MM  DPG SAFP  DN+F+W  T+ G   TAY+G +Y+L L FP  YPYKPP + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LWA+QE++R++  + Y+
Sbjct:   42 RLQSELMALMMGGDPGVSAFPEGDNIFQWVGTIDGSAATAYEGTSYRLALSFPSDYPYKPPKVKFETPCFHPNVDTHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWANQEEFRKMVEKLYK 179          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A5A8DJT4_CAFRO (UBC core domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DJT4_CAFRO)

HSP 1 Score: 195 bits (495), Expect = 4.030e-55
Identity = 86/141 (60.99%), Postives = 112/141 (79.43%), Query Frame = 1
Query:  757 RLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECV 1179
            RLQ ELM ++M+A+PG SAFP  DNLFEW  T+ G  +T ++G+ ++++LVFP  YP+K P +TFETP FHPNVDE GNICLDILKE+WS+A+SV T+L S+RSLL +PNNDSPLN  AA LW +Q +YR+VC+ KY+E  
Sbjct:   32 RLQAELMQLVMAAEPGVSAFPAGDNLFEWIGTIDGSKETVFEGMKFQMRLVFPAQYPFKAPQVTFETPVFHPNVDESGNICLDILKEEWSAAYSVKTLLVSIRSLLGEPNNDSPLNAHAAGLWDNQAEYRRVCVAKYEEAT 172          
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A4Y7LQC3_9CRUS (EOG090X0DZY n=1 Tax=Eubosmina coregoni TaxID=186181 RepID=A0A4Y7LQC3_9CRUS)

HSP 1 Score: 194 bits (494), Expect = 6.600e-55
Identity = 90/139 (64.75%), Postives = 106/139 (76.26%), Query Frame = 1
Query:  757 RLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQE 1173
            RLQQELMS+MMS D G SAFPN D++F W  T+KG   T Y+GL YKL L FP  YP+  P + F TPCFHPNVD HGNICLDILK+KWS+ + V TIL S++SLL DPNNDSPLN +AA LWA+Q  Y+QV L K+QE
Sbjct:   38 RLQQELMSLMMSGDKGISAFPNGDDVFSWIGTIKGPQGTVYEGLIYKLSLNFPNGYPFTAPTVKFVTPCFHPNVDTHGNICLDILKDKWSAMYDVRTILLSIQSLLGDPNNDSPLNMQAAQLWANQVAYKQVLLDKFQE 176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9D3_ECTSI6.230e-8489.58UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A9T770_PHYPA3.510e-5658.67Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
C3YEG7_BRAFL4.450e-5661.22UBC core domain-containing protein n=3 Tax=Branchi... [more]
A0A5J4Y1P3_9CHLO4.960e-5659.31Ubiquitin-conjugating enzyme E2 n=1 Tax=Trebouxia ... [more]
A0A8J4ZIV0_9CHEL8.130e-5656.95Ubiquitin-conjugating enzyme E2 C n=1 Tax=Nymphon ... [more]
A0A2R5GGQ9_9STRA1.080e-5564.75Ubiquitin-conjugating enzyme E2 C n=1 Tax=Hondaea ... [more]
A0A6J8EP90_MYTCO1.690e-5559.73UBE2C n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8EP90_... [more]
I1HED7_BRADI2.350e-5563.04UBC core domain-containing protein n=11 Tax=Pooide... [more]
A0A5A8DJT4_CAFRO4.030e-5560.99UBC core domain-containing protein n=2 Tax=Cafeter... [more]
A0A4Y7LQC3_9CRUS6.600e-5564.75EOG090X0DZY n=1 Tax=Eubosmina coregoni TaxID=18618... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84371contigH-elongata_contig84371:2..2714 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.2
Seed ortholog evalue2.8e-67
Seed eggNOG ortholog2880.D7G9D3
Preferred nameUBE2C
KEGG koko:K06674,ko:K06688,ko:K08707
KEGG Pathwayko04111,ko04120,map04111,map04120
GOsGO:0000151,GO:0000152,GO:0000209,GO:0000278,GO:0000280,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005680,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006807,GO:0006996,GO:0007049,GO:0007088,GO:0007096,GO:0007346,GO:0008150,GO:0008152,GO:0008283,GO:0009056,GO:0009057,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010458,GO:0010498,GO:0010564,GO:0010604,GO:0010638,GO:0010948,GO:0010965,GO:0010992,GO:0010994,GO:0016020,GO:0016043,GO:0016567,GO:0016740,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0019941,GO:0022402,GO:0022607,GO:0030071,GO:0030163,GO:0031145,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031461,GO:0031536,GO:0031625,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032436,GO:0032446,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034622,GO:0036211,GO:0042176,GO:0042592,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0045732,GO:0045786,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045930,GO:0045931,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051258,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060255,GO:0061630,GO:0061631,GO:0061650,GO:0061659,GO:0062033,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070647,GO:0070936,GO:0070979,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090068,GO:0090231,GO:0090233,GO:0090266,GO:0140014,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901976,GO:1901977,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902426,GO:1902494,GO:1903047,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903504,GO:1904666,GO:1904668,GO:1905818,GO:1905820,GO:1990234,GO:2001252
EggNOG free text desc.protein modification by small protein conjugation
EggNOG OGsCOG5078@1,KOG0421@2759
EC2.3.2.23
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUbiquitin-conjugating enzyme E2
Ec32 orthologEc-28_000490.1
Exons3
Model size1975
Cds size417
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84371.16051.1prot_H-elongata_contig84371.16051.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig84371 786..1940 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931249.0191002-UTR-H-elongata_contig84371:1..7851622931249.0191002-UTR-H-elongata_contig84371:1..785Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig84371 2..785 -
1691679759.0809464-UTR-H-elongata_contig84371:1..7851691679759.0809464-UTR-H-elongata_contig84371:1..785Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig84371 2..785 -
1622931249.0979283-UTR-H-elongata_contig84371:1940..27141622931249.0979283-UTR-H-elongata_contig84371:1940..2714Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig84371 1941..2714 -
1691679759.1285064-UTR-H-elongata_contig84371:1940..27141691679759.1285064-UTR-H-elongata_contig84371:1940..2714Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig84371 1941..2714 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931249.0410678-CDS-H-elongata_contig84371:785..8981622931249.0410678-CDS-H-elongata_contig84371:785..898Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84371 786..898 -
1691679759.0967226-CDS-H-elongata_contig84371:785..8981691679759.0967226-CDS-H-elongata_contig84371:785..898Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84371 786..898 -
1622931249.061353-CDS-H-elongata_contig84371:1174..13761622931249.061353-CDS-H-elongata_contig84371:1174..1376Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84371 1175..1376 -
1691679759.10675-CDS-H-elongata_contig84371:1174..13761691679759.10675-CDS-H-elongata_contig84371:1174..1376Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84371 1175..1376 -
1622931249.0797343-CDS-H-elongata_contig84371:1838..19401622931249.0797343-CDS-H-elongata_contig84371:1838..1940Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84371 1839..1940 -
1691679759.1165397-CDS-H-elongata_contig84371:1838..19401691679759.1165397-CDS-H-elongata_contig84371:1838..1940Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84371 1839..1940 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig84371.16051.1

>prot_H-elongata_contig84371.16051.1 ID=prot_H-elongata_contig84371.16051.1|Name=mRNA_H-elongata_contig84371.16051.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETY
PYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLL
ADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECVSEA*
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mRNA from alignment at H-elongata_contig84371:2..2714-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig84371.16051.1 ID=mRNA_H-elongata_contig84371.16051.1|Name=mRNA_H-elongata_contig84371.16051.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2713bp|location=Sequence derived from alignment at H-elongata_contig84371:2..2714- (Himanthalia elongata Himel1 dioecious)
GTTTTCCGCGGGAGAATATTGAAACTATACATCCCGGACTATTTTGTTAT AAAATCGTCCATTCTCTCAATATCCTCTATTAGTAAAACCCCTCTCTGGA ATGTTACAGTGTTGGTGTCCACCGCTTTTCCCAGCCTCCATAATATATAA TATATAATATTGAGTTTACATAATTATTACCCTGTTAAGTGTAGGAAAGA GAGATTACACGAAAACTGGTCTGTCCACCCGCTACGCTACCTTAAAAACT GCTGACTTGGTGCCAGCGGACTCTCAGTGGCAAACGTCATTAGTACGCAA ATGCGGAACATGATAAAATCGGGATTGACCCGATGGCGGTTGACGGTAGA GATAATCAAGATGCTTCTGGGAGTACGTACCAGATCCACCATGGGTTGGA TTGAAAATTAGCGGCCTGACGAGGGACGAGACAGCCGAACCGATCTCGCG AGACCAATTTTAGGCGCCGTTTTCCGCTCTAATTCAAATTTATTTTCCCT TATATGGGGAGCTGTTACTGAAGACGTTGGGTTGGCCTGTCATACTCGCG TTGCTTACTTTCGCTGTGATCTGACTGCAAGCAGGATTTGCTGCCTTACC TTCCTTACCACAACATGGAACTTGATATTATATGATATAGGAAATAAACT GATCCTCGCCTCTCCTACTTTCGCGATTTGGTTCGTTTTTGTTTGGTTTG GTGTCCTCACGAGATGATAATGTTCTCCCTGACATTGTTCTTACCTATAT AATCTCAGGTTGCAGCAGGAGCTAATGAGCATCATGATGAGCGCAGACCC TGGCGCTTCTGCCTTTCCCAATGACGACAATCTGTTCGAGTGGACAGCTA CCTTGAAGGGATGCGATGATACGGCGGTAAGCACTAAAATAGGGCTGGCT AGTGACGACTTGATCTTATTCATAGACCATCCATTTGATGCTGATATTTC CCTCGTGATTTATCCTGCCGATAATTGTAAAGAAAGCCCTCGAGTGCACG CATGGATGGACCTTTGAGGGATGGTTTGGGGTCGAAAACCACTTGTCATC TTTTTCTCTTACGTTTATTTTCCTGAACGCACCGTAATGTATGTAGAGAA TTGTTGCACCATTTCGATGGTGTTACACGATTTTGCTGATGTTATCTTTC CTCCTTCCCCTGACCCCTTACGTGTATTTTATCGTTTTCTACATTTGGCA TAGTCAAAGTAAAAGTATGAACATATTTTTTGCCTCGCTGCTGATCACGG CATGCTTTCGATCACGATCGCCCTGAACGTTATTTCACCGTTCGCCTTCG ACATTCTTGTTGATTACGCCCTCTGTCTCGCTACGCAGTACGATGGTCTT ACGTACAAGCTGAAGCTTGTGTTTCCCGAAACGTATCCGTACAAGCCGCC TCTGATCACATTCGAGACACCGTGCTTCCATCCAAACGTGGACGAGCACG GTAACATCTGTTTGGACATCTTGAAGGAAAAGTGGTCTTCGGCATTCAGC GTTAGCACCATCCTGCAGTCCTTGCGATCTTTGCTTGCTGGTGAGGCGTG TTTAAGAAAAAGAGACCTGCCTACCTTACCCATTAGGTCTGCTTGATCTA ACTGTCATAGTCATTGTTAGTCATCCTTAGCGTATTGATATCTAATTGCC AACCCGAGCTATCTACTTACACCAGGATACTAACGTTCTAAGCCTTTTGA TACCGCGTCTACATGATGAAAAATGAAAGCCATATGATCGGTTGAGATAT TTTGTGTTCTCAAAACACACTTGAAATTGTCATGATATCGATTGGTCCTT GTTCCACATTCTGCAGATCCGAACAACGACAGCCCGCTCAACACTGAGGC GGCACATTTATGGGCGGATCAGGAGAAATATAGACAAGTGTGCTTGCAAA AGTACCAGGAGTGCGTGTCAGAGGCATAATAAAGAGGCTAATTCAACGAT TCCTTTGGAGAAAAATTCTGTATGGCGTTGCATTAAAGGATACTTTGGCT ATTACCTGTTCTAGCGGCCAGGTACCCCTTTTTTTTGTGTACTTCAATTA TTTTGATGCAGCGAAGACTGTGTATACTCAAGGTAGACGTCATTTTCGGT TATTTCAGCGTGGGTTAGCGAAGTTTGGATACTGTACTGTACTTTGGCGA GATCTTTTTGTTGGGTGTGATTCGCTCGTGAGGAGCGCATCATTATTAAG GTAGTTCGTCCCAAGCATGTCTTCGTGTAAAGCTATCATAGCGCGATTGG GCACAGCCTGACTTGCGCTGTAGCAAATTGTTGACTAATCGAACAACGCA TCGGCTTTTGATACTCTTGTCTTAGTTTGAGTCGCTAATTTGCATCGTTT ATGAATGCGGGCCTTGACAACCGTAATGGTGCTTTTTAGCTTCCCCAACT CTGCGGAATATTTTTTGTTTGTAGTGATGTAGTTCTAATAGTACGGTTTT CTCGAAGAGACTAGATCTACGACGTATATTACCGATACGTTGCTTCGCCT TGCGACTTATGAGATGGTCAATCTACTAACCACGCGATATTGGCCGTCCT GACAGACTGCGTTTTGGCGGATTGTATGTAGCGACATGACTTCTTTTTGT ACCCCGGAGTCTAACTCAATTTGCCCTTAAACACCATAAAATAAATAATA ATAATATAAATTTGCGTGGTTTGAGTTGTGCCATTTTTTTTTATTTTTTT TATTTTTTTTATC
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Coding sequence (CDS) from alignment at H-elongata_contig84371:2..2714-

>mRNA_H-elongata_contig84371.16051.1 ID=mRNA_H-elongata_contig84371.16051.1|Name=mRNA_H-elongata_contig84371.16051.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=834bp|location=Sequence derived from alignment at H-elongata_contig84371:2..2714- (Himanthalia elongata Himel1 dioecious)
ATGAGCATCATGATGAGCGCAGACCCTGGCGCTTCTGCCTTTCCCAATGA
CGACAATCTGTTCGAGTGGACAGCTACCTTGAAGGGATGCGATGATACGG
CGATGAGCATCATGATGAGCGCAGACCCTGGCGCTTCTGCCTTTCCCAAT
GACGACAATCTGTTCGAGTGGACAGCTACCTTGAAGGGATGCGATGATAC
GGCGTACGATGGTCTTACGTACAAGCTGAAGCTTGTGTTTCCCGAAACGT
ATCCGTACAAGCCGCCTCTGATCACATTCGAGACACCGTGCTTCCATCCA
AACGTGGACGAGCACGGTAACATCTGTTTGGACATCTTGAAGGAAAAGTG
GTCTTCGGCATTCAGCGTTAGCACCATCCTGCAGTCCTTGCGATCTTTGC
TTGCTGTACGATGGTCTTACGTACAAGCTGAAGCTTGTGTTTCCCGAAAC
GTATCCGTACAAGCCGCCTCTGATCACATTCGAGACACCGTGCTTCCATC
CAAACGTGGACGAGCACGGTAACATCTGTTTGGACATCTTGAAGGAAAAG
TGGTCTTCGGCATTCAGCGTTAGCACCATCCTGCAGTCCTTGCGATCTTT
GCTTGCTGATCCGAACAACGACAGCCCGCTCAACACTGAGGCGGCACATT
TATGGGCGGATCAGGAGAAATATAGACAAGTGTGCTTGCAAAAGTACCAG
GAGTGCGTGTCAGAGGCATAAATCCGAACAACGACAGCCCGCTCAACACT
GAGGCGGCACATTTATGGGCGGATCAGGAGAAATATAGACAAGTGTGCTT
GCAAAAGTACCAGGAGTGCGTGTCAGAGGCATAA
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