prot_H-elongata_contig84153.16029.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84153.16029.1
Unique Nameprot_H-elongata_contig84153.16029.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length395
Homology
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI)

HSP 1 Score: 170 bits (430), Expect = 1.130e-42
Identity = 128/427 (29.98%), Postives = 195/427 (45.67%), Query Frame = 0
Query:    4 IDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQ-FLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGT-----------------------VGYYDQILNRQAVTWHLPTGGTTHRRLPVRRTKTTGYTSTSSTLEVVPEEPEEET------------PEIQPRDDLSERSEXXXXXXXSGEQLDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKHVGVLKQAMYGLVHPGLLW 394
            ID FTR   V  ++ K++     +D  ++      + I  + TD G E+  + FL FL    IK E +  Y+ Q NG  ERA   L D    +L       S  LW +AM YA  + +R  + +L   T PYE ++GR+P  +    FG                        +G+ + +   + +  H     +T  R  V    T G     +  +  P+E +EE             P      D  +  E        G Q D EP T+ EA+   +WP W+  I +E+   +  G W + + P G+  +G++ VFK K+  DG ++KYK RLVAQGF Q  G+ Y+E+ +P    A++ +++ + A  GW A Q+DV  AYL   +EEEIY+  P  Y +  K V  L +A+YGL   G  W
Sbjct:  569 IDDFTRATWVTLMQSKAEALQCFKDFKVEVENQTNLTIKRLHTDNGTEYVNEAFLEFLRTHGIKAERSVVYSPQQNGLAERANRTLGDMVRSMLAHAQLPNS--LWGDAMRYAAWIKDRTPTRALKDKT-PYEAFHGRKPNLEGARIFGCRAWIRVPEDRRQKLDARSAPYIFIGFQEGVKGVKVL--HPIKMRSTFSRDVVFDEDTFGIPEVEA--DAFPDEDDEEAQVNALLNPAPTVPSTDDHHDADDDEEVDFALSAHGPQ-DQEPKTIEEAKRRPDWPHWETAIKKELASLSENGTWTLEDLPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGWLAHQMDVITAYLNGNLEEEIYMRAPPGYAEGDK-VCRLCKALYGLKQAGRTW 986          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A5N6LQB9_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LQB9_9ASTR)

HSP 1 Score: 166 bits (420), Expect = 2.140e-41
Identity = 131/430 (30.47%), Postives = 196/430 (45.58%), Query Frame = 0
Query:    4 IDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGT-----------------------VGYYDQILNRQAVTWHLPTGGTTHRRLPVRRTKTTGY-----------TSTSSTL-EVVPEEPEE--ETPEIQPRDDLSERSEXXXXXXXSGEQLDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKHVGVLK--QAMYGLVHPGLLW 394
            ID  TR+  V  LK K +  +       +       KI V+R+D GGE+   F    ++  I  E T PY+ Q NG  ER    L++    +L  +  G S  +W EA+  A  + N+      D   +PYELW GR+P++  +  +G                        +GY       + +  H       H+   +     + +           TS+SS + E+V +E +E  E  E++PR    +R E           ++ EP T  EA  SSE PQWK  I  E+        W++V+ P G   LG R +FKRK+  DG I+KYK RLV +GFRQ +G+ Y ++ SP     SI +VL + A    E  Q+DV  A+L  ++EEEIY+E PE +    +   V K  +++YGL      W
Sbjct:  284 IDDSTRYCYVYLLKSKDEAIDKFVLYKTEVENQLNKKIKVLRSDRGGEYVSPFADICAQSRIIHECTAPYSPQQNGIAERKNRTLKEMMNAML--LSSGLSQDMWGEAILSATYLLNKIPFKKKD--VTPYELWMGRKPSYKYLKVWGCLAKVVVPPPKVQRIGPKTVDCVFIGYAHHSSAYRFLV-HDSKNPDIHKNTIMESRNASFFEEVFPCLKKEHTSSSSCVDEIVHDEDQEQSEAEEVEPRRSKRQRIEKSFGTDFLTYMVEGEPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSALGQEGKVCKLVKSLYGLKQAPKQW 708          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A5N6PKD3_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PKD3_9ASTR)

HSP 1 Score: 165 bits (417), Expect = 2.880e-41
Identity = 129/430 (30.00%), Postives = 194/430 (45.12%), Query Frame = 0
Query:    4 IDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGT-----------------------VGYYDQILNRQAVTWHLPTGGTTHRRLPVRRTKTTGYT------------STSSTLEVVPEEPEE--ETPEIQPRDDLSERSEXXXXXXXSGEQLDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKHVGVLK--QAMYGLVHPGLLW 394
            ID  TR+  V  LK K +  +       +       KI V+R+D GGE+   F    ++  I  E T PY+ Q NG  ER    L++    +L  +  G S  +W EA+  A  + N+      D   +PYELW GR+P++  +  +G                        +GY       + +  H       H+   +     + +             S+S   E+V +E +E  E  E++PR    +R E           ++ EP T  EA  SSE PQWK  I  E+       +W++V+ P G   LG R +FKRK+  DG I+KYK RLV +GFRQ +G+ Y ++ SP     SI +VL + A    E  Q+DV  A+L  ++EEEIY+E PE +    +   V K  +++YGL      W
Sbjct:   27 IDDSTRYCYVYLLKSKDEAIDKFVLYKTEDENQLNKKIKVLRSDRGGEYVSPFADICAQSGIIHECTAPYSPQQNGIAERKNRTLKEMMNAML--LSSGLSQDMWGEAILSATYLLNKIPFKKKD--VTPYELWMGRKPSYKYLKVWGCLAKVVVPPPKVQRIGPKTVDCVFIGYAHHSSAYRFLV-HDSKNPDIHKNTIMESRNASFFEEVFPCLKKEHTRSSSCVDEIVHDEDQEQSEAEEVEPRRSKKQRIEKSFGTDFLTYMVEGEPQTYREAVTSSEGPQWKEAIKNEIDSILQNHIWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSAPGQEGKVCKLVKSLYGLKQAPKQW 451          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A5N6LHA7_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LHA7_9ASTR)

HSP 1 Score: 165 bits (417), Expect = 4.020e-41
Identity = 130/438 (29.68%), Postives = 197/438 (44.98%), Query Frame = 0
Query:    4 IDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGT-----------------------VGY-----------YDQ---------ILNRQAVTWHLPTGGTTHRRLPVRRTKTTGYTSTSSTLEVVPEEPEE--ETPEIQPRDDLSERSEXXXXXXXSGEQLDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKHVGVLK--QAMYGLVHPGLLW 394
            ID  TR+  V  LK K +  +       +       KI V+R+D GGE+   F    ++  I  E T PY+SQ NG  ER    L++    +L  +  G S  +W EA+  A  + N+      D   +PYELW GR+P++  +  +G                        +GY           YD          I+  +  ++         + LP         +S++   E+V ++ +E  E  E++PR    +  E           ++ EP T  +A  SSE PQWK  I  E+        W++V+ P G   LG R +FKRK+  DG I+KYK RLV +GFRQ +G+ Y ++ SP     SIS+VL + A    E  Q+DV  A+L  ++EEEIY+E PE +    +   V K  +++YGL      W
Sbjct:   70 IDDSTRYCYVYLLKSKDEAIDKFVLYKTEVENQINKKIKVLRSDRGGEYVSPFADICAQNGIIHECTTPYSSQQNGIAERKNRTLKEMMNAML--ISSGMSQDMWGEAIVSATYILNKIPFKKKD--VTPYELWMGRKPSYKYLTVWGCLAKVVVPPPKVQRIGPKTVDCVFIGYAHHSSAYRFLVYDSKNPEIHNNTIMESRNASFFEEVFPCLRKELP---------SSSTPVDEIVHDKDQEQLEAEEVEPRRSKRQMIEKSFGPDFLTYMVEGEPQTYRDAVTSSEIPQWKETIKNEIDSILQNHTWELVDLPPGCKTLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDTYSPVTRITSISLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSAPGQEGKVCKLVKSLYGLKQAPKQW 494          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A5N6NZY0_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NZY0_9ASTR)

HSP 1 Score: 163 bits (413), Expect = 1.870e-40
Identity = 128/420 (30.48%), Postives = 194/420 (46.19%), Query Frame = 0
Query:   14 RFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGT-----------------------VGYYDQILNRQAVTWHLPTGGTTHRRLPVRRTKTTGY-----------TSTSSTL-EVVPEEPEE--ETPEIQPRDDLSERSEXXXXXXXSGEQLDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKHVGVLK--QAMYGLVHPGLLW 394
            +F+ +K++V N L             KI V+R+D GGE+   F    ++  I  E T PY+ Q NG  ER    L++    +L  +  G S  +W EA+  A  + N+      D   +PYELW GR+P++  +  +G                        +GY       + +  H       H+   +     + +           TS+SS + E+V +E +E  E  E++PR    +R E           ++ EP T  EA  SSE PQWK  I  E+        W++V+ P G   LG R +FKRK+  DG I+KYK RLV +GFRQ +G+ Y ++ SP     SI +VL + A    E  Q+DV  A+L  ++EEEIY+E PE +    +   V K  +++YGL      W
Sbjct:  377 KFVLYKTEVENQLNK-----------KIKVLRSDRGGEYVSPFADICAQSGIIHECTAPYSPQQNGLAERKNRTLKEMMNAML--LSSGLSQDMWGEAILSATYLLNKIPFKKKD--VTPYELWMGRKPSYKYLKVWGCLAKVVVPPPKVQRIGPKTVDCVFIGYAHHSSAYRFLV-HDSKNPDIHKNTIMESRNASFFEEVFPCLKREHTSSSSCVDEIVHDEDQEQSEAEEVEPRRSKRQRIEKSFGTDFLTYMVEGEPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWLFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSALGQEGKVCKLVKSLYGLKQAPKQW 780          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A5N6NLM6_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NLM6_9ASTR)

HSP 1 Score: 161 bits (408), Expect = 8.060e-40
Identity = 128/438 (29.22%), Postives = 195/438 (44.52%), Query Frame = 0
Query:    4 IDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGT-----------------------VGY-----------YDQ---------ILNRQAVTWHLPTGGTTHRRLPVRRTKTTGYTSTSSTLEVVPEEPEE--ETPEIQPRDDLSERSEXXXXXXXSGEQLDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKHVGVLK--QAMYGLVHPGLLW 394
            ID  TR+  V  LK K +  +       +       KI V+R+D GGE+   F    ++  I  E T PY+ Q NG  ER    L++    +L  +  G S  +W EA+  A  + N+      D   +PYELW GR+P++  +  +G                        +GY           YD          I+  +  ++         + LP         +S++   E+V +E +E  E  +++PR    +  E           ++ EP T  +A  SSE PQWK  I  E+        W++V+ P G   LG R +FKRK+  DG I+KYK RLV +GFRQ +G+ Y ++ SP     SI +VL + A    E  Q+DV  A+L  ++EEEIY+E PE +    +   V K  +++YGL      W
Sbjct:  505 IDDSTRYCYVYLLKSKDEAIDKFVLYKTEVENQLNKKIKVLRSDRGGEYVSPFADICAQNGIIHECTAPYSPQQNGIAERKNRTLKEMMNAML--ISSGMSQDMWGEAILSATYLLNKIPFKKKD--VTPYELWMGRKPSYKYLKVWGCLAKVVVPPPKVQKLGPKTVDCVFIGYAHHSSAYRFLVYDSKNPEIHKNTIMESRNASFFEEVFPCLKKELP---------SSSTQVDEIVHDENQEQLEAEDVEPRRSKRQMIEKSFGPDFLTYMVEGEPQTYRDAVTSSEGPQWKEAIKNEIDSILQNHTWEIVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSAPGQEGKVCKLVKSLYGLKQAPKQW 929          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A5N6P275_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P275_9ASTR)

HSP 1 Score: 156 bits (395), Expect = 1.980e-39
Identity = 124/399 (31.08%), Postives = 183/399 (45.86%), Query Frame = 0
Query:   14 RFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYY----DQILNRQAVTWHLPTGGTTHRRLPVRRT----------KTTGYTSTSSTL--EVVPEEPEEETPEIQPRDDLSERSEXXXXXXXSGEQLDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKHVGVLK--QAMYGLVHPGLLW 394
            +F+ +K++V N L             KI V+R+D GGE+   F    ++  I  E T PY+ Q NG  ER    L++    +L  +  G S  +W EA+  A  + N+      D   +PYELW GR+P++  +  +G +        ++      T      G  H     R            K T   S +++   EV P   +E +    P D++             GE     P T  +A  SSE PQWK  I  E+        W++V+ P G   LG R +FKRK+  DG I+KYK RLV +GFRQ +G+ Y +S SP     SI +VL + A    E  Q+DV  A+L  ++EEEIY+E PE +    +   V K  +++YGL      W
Sbjct:   66 KFVLYKTEVENQLNK-----------KIKVLRSDRGGEYVSPFADICAQNGIIHECTAPYSPQQNGIAERKNRALKEMMNAML--ISSGMSQDMWGEAILSATYLLNKIPFKKKD--VTPYELWMGRKPSYKYLKVWGCLAKVVVPPPKVQRIGPKTVDCVFIGYAHHSSAYRFLVYDSKNPEIHKNTIIESRNASFFEEVFPCLKKEISNSSTPVDEIVHDEYQEQLEAEEGE-----PQTYRDAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDSYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSAPGQEGKVCKLVKSLYGLKQAPKQW 444          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A2N9F5X3_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F5X3_FAGSY)

HSP 1 Score: 159 bits (403), Expect = 2.670e-39
Identity = 116/382 (30.37%), Postives = 175/382 (45.81%), Query Frame = 0
Query:   15 FLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYYDQILNRQAVTWHLPTGGTTHRRLPVRRTKTTGYTSTSSTLEVVPEEPEEETPEIQPRDDLSERSEXXXXXXXSGEQLDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAY--RDSRKHVGVLKQAMYGLVHPGLLW 394
            F+ +K +V N L             KI V+R+D GGE+   F  F S+  I  ++T PY+ Q NG  ER    L++    +L  +  G    LW EA+  A  + N+     LD   +PYELW GR P++  +  +G +                                     STSST     +E  EE  E++PR     ++            L+ EP +  EA +  E P WK  +  E+        W++V+ P G   LG + +FKRK+  DG I+KYK RLV +G++Q +G+ Y ++ SP     SI M++ + A    E  Q+DV  A+L  E++EEIY+E PE +      K V  L +++YGL      W
Sbjct:  136 FIHYKKEVENQLNK-----------KIKVLRSDRGGEYESPFGEFCSQHGIVHQTTAPYSPQQNGVAERKNRTLKEMMNAML--ISSGLPQNLWGEAILSANYILNKLPQKKLDK--TPYELWKGRTPSYQFLKVWGNLE------------------------------------STSSTSH--DQELMEERNEVEPRRSKRTKTSKTFGPDFLTFMLEDEPQSFKEAMSMPEAPLWKEAVNSEIESILQNHTWELVDLPPGCKPLGYKWIFKRKMKADGSIDKYKARLVVKGYKQKEGVDYFDTYSPVTRITSIRMLIAIAALYNLEIHQMDVKTAFLNGELDEEIYMEQPEGFIVPGKEKKVCRLVKSLYGLKQAPKQW 464          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A5N6MYY0_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MYY0_9ASTR)

HSP 1 Score: 159 bits (403), Expect = 4.410e-39
Identity = 125/428 (29.21%), Postives = 193/428 (45.09%), Query Frame = 0
Query:   14 RFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGT-----------------------VGY-----------YDQ---------ILNRQAVTWHLPTGGTTHRRLPVRRTKTTGYTSTSSTLEVVPEEPEE--ETPEIQPRDDLSERSEXXXXXXXSGEQLDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKHVGVLK--QAMYGLVHPGLLW 394
            +F+ +K++V N L             KI V+R+D GGE+   F    ++  I  E T PY+ Q NG  E     L++    +L  +  G S  +W EA+  A  + N+      D   +PYELW GR+P++  +  +G                        +GY           YD          I+  +  ++         + LP         +S++   E+V +E +E  E  E++PR    +R E           ++ EP T  +A  SSE PQWK  I  E+        W++V+ P G   LG R +FKRK+  DG I+KYK RL+ +GFRQ +G+ Y ++ SP     SI +VL + A    E  Q+DV  A+L  ++EEEIY+E PE +    +   V K  +++YGL      W
Sbjct:  461 KFVLYKTEVENQLNK-----------KIKVLRSDRGGEYISPFADICAQNGIIHECTAPYSPQQNGIAELKNRTLKEMMNAML--ISSGMSQDMWGEAILSATYLLNKIPFKKKD--VTPYELWMGRKPSYKYLKVWGCLAKVVVSPPKVQRIGPKTVDCVFIGYAHHSSAYRFLVYDSKNPEIHKNTIMESRNASFFEEVFPCLKKELP---------SSSTQVDEIVHDEDQEQLEAEEVEPRRSKRQRIEKSFGPDFLTYMVEGEPQTYRDAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLLIKGFRQKEGVDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSAPGQEGKVCKLVKSLYGLKQAPKQW 864          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: UPI0011DF2343 (uncharacterized protein LOC115720458 n=1 Tax=Cannabis sativa TaxID=3483 RepID=UPI0011DF2343)

HSP 1 Score: 159 bits (401), Expect = 7.740e-39
Identity = 127/417 (30.46%), Postives = 199/417 (47.72%), Query Frame = 0
Query:    1 MLCIDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVI---RTDGGGEWHGQ-FLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYYDQILNRQAVTWHL------PTGGTTHRRLPVRRTKTTGYTSTSSTLEVVPEEP-EEETPEIQPRDDLSERSEXXXXXXXSGEQLDPEPTTMGEAQASSEWPQ----------WKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSR--KHVGVLKQAMYGLVHPGLLW 394
            M+C+D F+RF  V FLK KSD   A   + +     +   IG +   R+D G E+  + F  F  K+ I  E + P T Q NG VER    L++   V+L  V  G  +  W + M   C + NR +     +  +PYELW G+ P   ++  FG + Y   ILN +    HL         G     +    + +    S       +P  P ++  PEI   +D  + SE       S E ++ E  ++    A ++ PQ          W   +  EMG      VW +V +P G  ++GT+ +FK K D+ G + + K RLVAQG+ QV+G+ +EE+ +P     SI ++L +   L ++  Q+DV  A+L   ++EE+YV+ P+ + D +   HV  LK+A+YGL      W
Sbjct:  980 MVCVDDFSRFTWVNFLKEKSDTFGAFSSLCLKLQNEKDATIGKVYRVRSDHGKEFENEIFAQFCDKMGINHEFSAPKTPQQNGIVERKNRTLQEMARVML--VQRG-CNCFWVKQMNTRCYICNR-VHLRTGATQTPYELWKGKTPNLSHVHIFGCICY---ILNDRD---HLGKFDARSDEGFDDLEVSDNGSGSGEEESQDPCSMSIPSTPLKQHNPEITSSEDQPDSSENETSP--SAELIEDEVISVPRLLAKTQ-PQNVTEALLDEFWNNAMQDEMGQFKRNKVWILVPKPDGVNIIGTKWLFKNKSDEFGTVVRNKARLVAQGYNQVEGVDFEETFAPVARLESIRLLLAVACFLKFKLHQMDVKSAFLNGLLQEEVYVKQPKGFEDPKFPDHVYKLKKALYGLKQAPRAW 1383          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5C3E5T1_9BASI1.130e-4229.98Uncharacterized protein n=2 Tax=Ustilago trichopho... [more]
A0A5N6LQB9_9ASTR2.140e-4130.47Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A5N6PKD3_9ASTR2.880e-4130.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A5N6LHA7_9ASTR4.020e-4129.68Integrase catalytic domain-containing protein n=2 ... [more]
A0A5N6NZY0_9ASTR1.870e-4030.48Integrase catalytic domain-containing protein n=1 ... [more]
A0A5N6NLM6_9ASTR8.060e-4029.22Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A5N6P275_9ASTR1.980e-3931.08Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9F5X3_FAGSY2.670e-3930.37Integrase catalytic domain-containing protein n=2 ... [more]
A0A5N6MYY0_9ASTR4.410e-3929.21Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
UPI0011DF23437.740e-3930.46uncharacterized protein LOC115720458 n=1 Tax=Canna... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 3..91
e-value: 1.1E-9
score: 38.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..141
score: 15.758
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..153
e-value: 2.0E-18
score: 68.3
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 268..394
e-value: 4.4E-29
score: 101.8
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 212..363
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 212..363
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84153contigH-elongata_contig84153:602..2230 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84153.16029.1mRNA_H-elongata_contig84153.16029.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84153 13..2374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84153.16029.1 ID=prot_H-elongata_contig84153.16029.1|Name=mRNA_H-elongata_contig84153.16029.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=395bp
MLCIDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGG
EWHGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVM
EGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPF
GTVGYYDQILNRQAVTWHLPTGGTTHRRLPVRRTKTTGYTSTSSTLEVVP
EEPEEETPEIQPRDDLSERSEPADDASESGEQLDPEPTTMGEAQASSEWP
QWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKY
KCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVD
MAYLEAEVEEEIYVELPEAYRDSRKHVGVLKQAMYGLVHPGLLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf