mRNA_H-elongata_contig84153.16029.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig84153.16029.1
Unique NamemRNA_H-elongata_contig84153.16029.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A2R6RYD4_ACTCC (Endonuclease n=2 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RYD4_ACTCC)

HSP 1 Score: 245 bits (626), Expect = 7.570e-66
Identity = 199/659 (30.20%), Postives = 307/659 (46.59%), Query Frame = 1
Query:    1 CVHC---SESRVRRYAVPKSTENRTDWGAGRLFIDLSGPFHDTSLGGNIFIMLCIDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQ-FLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPT-FDNIPPFGTVGYYD---------------------------------QILNRQAVTW------------HLPTGGTTHRRL--PVRRTKTTGYTSTSSTLEVVPEEPEEETPEIQPRDDLSER--SEXXXXXXXSGEQ-------------------LDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYR-DSRKHVGV-LKQAMYGLVHPGLLW*KTFGIELEVKGFQRSQGDPCVFRRIFHGVVVVVIVVYVDDLLVASATKRDGEQAVRDLCSCFPIKDLGKASYYLGCHITRDRNSGTLTFDQHQYIHTMAERFGVTKTR--IIPPVAGGKALSKSDSPQTDAEVEEMRQIPY 1746
            C HC    ++RV+       TE   D+    +  D+ GP  + SLGG+ + +  +D F+R   V  ++HK +V               G KI  +R+D GGE+    F    SK  I R  T   T Q NG  ER    L DK   ++     G S   WAEA+ YA  + NR  S++++ G +P E+W G+  T +D++  FG   Y+                                  +I+N + VT+            +L    T    L  PV  TKT        T+++    P+EE+ +I    DL E   S+       S  Q                   ++  P T  +A   +E P+WKR +  EM        W++VE PKGK  +G + ++ +K D  G   ++K RLVA+G+ Q +GI Y E  SP    +SI ++L ++A    E  QLDV  A+L  ++EEEIY+  P  ++   ++H+   LK+++YGL      W K F + ++  G+ RSQ D CV+ R      ++ +++YVDD+L+AS +K + ++    L   F +KDLG+A   LG  I RDR  GT+   Q QY+  + +RFG+  +   +  P+A    LS S SP T+ E + M  IPY
Sbjct:  470 CEHCVLGKQTRVKFGTAIHQTEGILDY----VHSDVWGPSKNASLGGSRYFVTFVDDFSRRVWVYTMRHKDEVLEIFLKWKKMIETQTGRKIKKLRSDNGGEYRSDPFFDVCSKEGIVRHFTIKGTPQQNGVAERMNRTLVDKVRCMICNA--GLSKAFWAEAINYAAHLTNRLPSTAIE-GKTPMEVWSGKCATDYDSLHIFGCPAYFHVKEDKLDPRAKKAIFVGFSTGVKGYRLWCPETKKIVNSRDVTFDESVMMKNSEKENLSPISTQQVELVSPVVPTKTV------QTVDI----PDEESDDIDTTPDLKEAQSSQPAESIATSRPQRVIRRPARYTDTVAYALPVIEGVPCTYKDAVQGTENPKWKRAMDEEMKSLHKNQTWELVELPKGKKAIGCKWIYGKKEDTQG--IRFKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGDLEEEIYMSQPAGFQVPGKEHLACRLKKSLYGLKQSPRQWYKRFDLFMDEHGYTRSQFDHCVYFRKLQDGSMIYLLLYVDDMLIASKSKVEIDRLKAQLSREFEMKDLGEAKKILGMEIKRDRVKGTVWLTQSQYLKKVLQRFGIDSSTKPVSTPLASHFRLSASMSPHTEDERKHMENIPY 1109          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A7N2KXD4_QUELO (Uncharacterized protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2KXD4_QUELO)

HSP 1 Score: 238 bits (606), Expect = 3.460e-63
Identity = 187/633 (29.54%), Postives = 298/633 (47.08%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRTDWGAGRLFIDLSGPFHDTSLGGNIFIMLCIDVFTRFKMVRFLKHKSDVTNALRDI--IIDYFAPEGVKIGVIRTDGGGEWHG-QFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVV-LLRGVMEGKSDRL--WAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYYDQILNRQA-----------------------VTWHLPTGGTTHRRLPV---------------RRTKTTGYTSTSSTLEVVPEEPEEETPEIQPRDDLSERS-EXXXXXXXSGEQLDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAY--RDSRKHVGVLKQAMYGLVHPGLLW*KTFGIELEVKGFQRSQGDPCVFRRIFHGVVVVVIVVYVDDLLVASATKRDGEQAVRD---LCSCFPIKDLGKASYYLGCHITRDRNSGTLTFDQHQYIHTMAERFGVTKTRIIP-PVAGGKALSKSDSPQTDAEVEEMRQIPY 1746
            C HC   + +R    K+T  R  +    +  D+ GP +  +  G  + +  ID +TR+  V  + HKS+  +  R    +++    + +K   +RTD G E+   QF     +  I R+ T PYTSQ NG  ER     R++T++ ++R +M   +  +  W +A+  A  + NR  S S+ S  +PYELW G++   +N+ P+G+ GY     +R                         +   L       + +                 R + +    S S+ LEV P++P+   P    R ++  R  E          Q D EP  + EA +SS   +W + +  EM       VW +V+ P G+  +G + V K K   D  IE+YK RLVA+G+ Q +G+ YEE+ SP    AS+ ++L ++A L  E  Q+DV  A+L  E++EEIY++ P  +  +     V  LK+++YGL      W   F   +   GF   + D CV+ +   G   +++ +YVDD+L+A     D E  +     L S F +KD+G+A Y LG  I RDR+   L   Q  YI  + ERF +   + I  PVA  ++LS    P+T  E E+M  +PY
Sbjct:  810 CEHCLVGKSKRKPFGKAT--RASFPLQLIHSDICGPMNVRARHGGFYFITFIDDYTRYGHVYLISHKSEALDCFRRYMRLVENQLDKSIK--ALRTDRGREYLSEQFKELCDEKGIARQLTMPYTSQQNGVAER-----RNRTLLEMVRSMMAQANLPISYWGDALLTAAYILNRVPSKSVSS--TPYELWTGKKLDLNNLRPWGSTGYVHNTSHRYGKLGPRGKKCIFIRYSEHSKGYVLIGEQLDGSEMMDQEVDAPSRLVEDKEEILETPRDSGSDSQPSGSTPLEVDPQQPQ---PRRSNRGNIPRRRFEIEGEAFMIASQDDDEPKNVQEALSSSVSNEWMKAMNDEMESMRTNQVWDLVDLPSGRKAIGNKWVLKIKRKADRSIERYKARLVAKGYTQKEGVDYEETFSPVVRFASVRLILAIVANLNLELYQMDVKTAFLNGELDEEIYMDQPIGFVTKGQEHKVCKLKRSIYGLKQSSRQWYLRFHRAVLTNGFTMIEEDHCVYVKRSKG-SFIILSLYVDDILLAG---NDMEMIIATKGWLSSNFEMKDMGEADYILGVKILRDRSKKLLGLSQQTYIKKVLERFQMHNCKPIDTPVAKNESLSLDMCPKTQDEKEKMASVPY 1424          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A5A7QRB1_STRAF (Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QRB1_STRAF)

HSP 1 Score: 236 bits (603), Expect = 6.650e-63
Identity = 188/643 (29.24%), Postives = 300/643 (46.66%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRTDWGAGRLFIDLSGPFHDTSLGGNIFIMLCIDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEW-HGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVV-LLRGVMEGKS--DRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGT---------------------VGY------------YDQ---------ILNRQAVTWHLPTGGTTHRRL--------PVRRTKTTGYTSTSSTLEVVPEEPEEETPEIQPRDDLSERSEXXXXXXXSGEQ----LDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAY-RDSRKH-VGVLKQAMYGLVHPGLLW*KTFGIELEVKGFQRSQGDPCVFRRIFHGVVVVVIVVYVDDLLVASATKRDGEQAVRDLCSCFPIKDLGKASYYLGCHITRDRNSGTLTFDQHQYIHTMAERFGVTKTRI-IPPVAGGKALSKSDSPQTDAEVEEMRQIPY 1746
            C  C E ++ +     +   R+    G +  DL GP    + GG  + +  ID ++RF  V  L  KS+     ++         G  I  +R+D GGE+  G+F ++LS+  I+ + T P T Q NG  ER     R++T++ ++R +M      D  W  A+  A  + N   S S+D  T+PYE+W GR+P+F     +G+                     VGY             DQ          L    +  H P        L        P  +  T+  T+T  T  V    P +  P    R  +S   +       S +     L+ +P T  EA    +   W   +  EMG   +  VW +VE P G   +G + ++KRK   DG+++ +K RLVA+G+ Q++GI Y+E+ SP     SI ++L + A + +E  Q+DV  A+L   ++E+IY++ PE +  + R+H V  L +++YGL      W   F   ++  GF +   + CV+++I  G VVV +V+YVDD+L+   +K++       L   F +KDLG+A + LG  + RDR    L   Q  YI T+  RF +  ++  + P   G  LSK  SP+T  E+EEM+ +PY
Sbjct:  464 CESCLEGKMAKRPFT-AKGYRSQEVLGLIHSDLCGPMSIQARGGFEYYVSFIDDYSRFGYVYLLHRKSECFEKFKEYRAVVEKLHGKCIKSLRSDRGGEYLFGEFRTYLSEAGIESQLTAPGTPQQNGVAER-----RNRTLMEMVRSMMSYSRLPDSFWGLALETASYILNMVPSKSVD--TTPYEMWKGRKPSFSQFRVWGSPAHVLVQEPGKLEKRSEARVFVGYPKGTKGGLFYSPEDQKVIVSTNARFLEEDYIMNHKPASRLVLEELRGEIDGSPPSAQVDTSHNTATRHTESV----PVQTVPRRSGR--VSHLPDRWIGLGESSDSVPGGLESDPRTYDEALQDKDADSWNVAMKAEMGSMDSNQVWDLVELPDGVRPIGCKWIYKRKRGLDGKVQTFKARLVAKGYTQIEGIDYDETFSPVAMLKSIRILLAVAAHMDYEVWQMDVKTAFLNGNLQEDIYMQQPEGFIAEGREHLVCKLNRSIYGLKQASRSWNIRFDEVIQSYGFTQCPDEHCVYKKI-SGSVVVFLVLYVDDILLIGNSKKELSDVKVWLSKQFDMKDLGEAGHILGIRLIRDRKKRMLCLSQSSYIDTVLARFSMQDSKKGMLPFRHGIPLSKEMSPKTSKEIEEMKTVPY 1091          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A4Y2GYT7_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2GYT7_ARAVE)

HSP 1 Score: 229 bits (585), Expect = 1.300e-62
Identity = 166/562 (29.54%), Postives = 265/562 (47.15%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRTDWGAGRLFIDLSGPFHDTSLGGNIFIMLCIDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQFLS-FLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGTVGY-YDQILNRQAVTWHLPTG---GTTHRRLPVRRTKTTGYTSTSSTLEVVPEEP---EEETPEIQPRDDLSERSEXXXXXXXSGEQLDP-EPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKHVGVLK--QAMYGLVHPGLLW*KTFGIELEVKGFQRSQGDPCVFRRIFHGVVVVVIVVYVDDLLVASATKRDGEQAVRDLCSCFPIKDLGKASYYLGCHITRDRNSGTLTFDQHQYIHTMAERFGVTKTR 1653
            C+HC ++++  +  PK  + R       +  DL GP    S+ G  +I+  +D ++R+ M+  L  K +V + L++ I       G  + V+R+D GGE+ G+ +  FL +  I  + T PY+ Q NG  ER    L + T  LL         R WAEA   A  + NR        G +PYELW   +P   +I  FG   Y Y Q   R+ +      G   G  +R    R          S T++ +   P   ++E  E+Q +D+ +++             ++  E     E +   E  +W      EM        W++V  P GK V+G R  FK K D  G IE+YK RLVAQGF Q  G  Y+E+ +P     +I   L   A        +D+  A+L   +E+E+Y+  PE Y ++ +   V K  +A+YGL      W    G  L   GF++S+ DPC+F+   +G  + +IV YVDDLL+A   + D  + +++L   + +K+LG+ +YYLG +I R +  G    +Q   I  + E+F + + +
Sbjct:   80 CIHCIKNKLSEFPYPKEAKYRATHPLDLVHSDLCGPMPTQSVSGKCYILTFVDDYSRYSMIYLLSKKDEVLSKLKEYIAMTRNKFGRTLKVLRSDNGGEYIGKEIEDFLKEQGIVHQLTVPYSPQLNGVSERKNRSLIEMTRCLLSEA--NLPQRFWAEAAMTATYLQNRLPIKP--KGKTPYELWTNHKPNLSHIRVFGCKAYAYIQKQKRRKLDSKAIEGIFLGYDYRSKGYRIYLGDNKIMISRTVKFIENPPPYAKKEAKELQKQDETTQQLVELELEHEENHSMEEGEINERTEMENPYEKQKWIESTKEEMESLQKNETWKLVTPPSGKKVIGCRWTFKAKYDSKGNIERYKARLVAQGFSQKFGTDYDETFAPVVTYTTIRTFLAAAAYKNLNVTHVDIKTAFLHGNLEDEVYMSQPEGYIEAGQEQKVCKLNKAIYGLKQAARAWHLKIGESLIKYGFEQSKADPCLFKFANNGNPMYIIV-YVDDLLIAGKDE-DIRKIIKELEEEYELKNLGEVNYYLGINIERTKE-GNFALNQKNKIEEIVEKFNLKEAK 634          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A8J5ZH56_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5ZH56_9ROSI)

HSP 1 Score: 234 bits (597), Expect = 4.060e-62
Identity = 186/605 (30.74%), Postives = 285/605 (47.11%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRTDWGAGRLFIDLSGPFHDTSLGGNIFIMLCIDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQFLSFLSKLE-IKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYYDQ-------------ILNRQAVTWHLPTGGTTHRRLPVRRTKTTGYTSTSSTLEVVP---EEPEEETPEIQPRDDLSERSEXXXXXXXSGEQLDP--EPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIE-KYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRK--HVGVLKQAMYGLVHPGLLW*KTFGIELEVKGFQRSQGDPCVFRRIFHGVVVVVIVVYVDDLLVASATKRDGEQAVRDLCSCFPIKDLGKASYYLGCHITRDRNSGTLTFDQHQYIHTMAERFGVTKTR-IIPPVAGGKALSKSDSPQTDAEVEEMRQIPY 1746
            C HC   + +R    +   N  +     +  DL GP    S GG  +++  ID F+R     FLK KSDV +A +   I      G +I  +RTD G E+     + L K E I R  T  +T Q NG  ER    + +K   +L      KS   WAEA + AC + NR +S +++  T P E+W G    + ++  FG   Y                 L  +A           +R++ + R      T+    L +     +E ++   EI+P    +E ++         E +D   EP+   EA +  +  +W   +  EM        W +V+ PKGK  +  + VFK+K    G  E KYK RLVA+G+ QV G+ + +  SP    +SI  +LG++A    E  QLDV +A+L  E+EE+IY++ PE +  S K  +V +LK+++YGL      W K F   +    F+RS  D CV+ +  +    V +++YVDD+L+A+  K +  +    L   F +KDLG A   LG  I RDR +  L   Q  YI  +  RF +   + +  P+A    LS + SPQ+D E+E M  +PY
Sbjct:  469 CEHCVFGKQKRVRFTRGIHNTKET-LEYIHSDLWGPSRVPSRGGANYMLTFIDDFSRKVWAFFLKQKSDVFSAFKSWKIMIEKQTGKQIKYLRTDNGLEFCSDEFNRLCKSEGIVRHLTVRHTPQQNGVAERMNRTIMEKVRCMLSNANLPKS--FWAEAASTACFLINRSLSVAIEKKT-PQEVWSGNPANYSDLKIFGCPAYAHVNNGKLEPRSIKCVFLGYKAGVKGYKLWCPENRKVVISRDVVFDETAMLPNLSLKDCSNKENQKTKREIKPPKKYAE-ADLVAYALNVAEDIDANQEPSNYSEAISCEDSEKWMFAMQEEMESLHKNKTWDLVKLPKGKKTVRCKWVFKKKEGTPGVEEPKYKARLVAKGYSQVPGVDFTDVFSPVVKHSSIRALLGIVAMHDLELEQLDVKIAFLHGELEEDIYMQQPEGFTVSEKEDYVCLLKKSLYGLKQSPRQWYKRFDSFMTSHDFKRSSFDSCVYFKKNNNGSFVYLLLYVDDMLIAAKDKGEIRKVKAQLSEEFEMKDLGPAKKILGMEILRDRKTSKLYLSQKGYIEKLLCRFNMRSAKPVSTPLAAHFRLSSALSPQSDDEIEYMSHVPY 1068          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A8J6DEC3_9ROSI (Integrase catalytic domain-containing protein n=2 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6DEC3_9ROSI)

HSP 1 Score: 232 bits (592), Expect = 1.080e-61
Identity = 191/624 (30.61%), Postives = 293/624 (46.96%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRTDWGAGRLFIDLSGPFHDTSLGGNIFIMLCIDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPT-FDNIPPFGTVGYY-------DQILNR---QAVT--------WHLPTG------GTTHRRLPVRRTKTTGYTSTSSTL-------EVVPEEPEEETPE----IQPRDDLSERSEXXXXXXXSGEQLDPE-PTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIE-KYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDS--RKHVGVLKQAMYGLVHPGLLW*KTFGIELEVKGFQRSQGDPCVFRRIFHGVVVVVIVVYVDDLLVASATKRDGEQAVRDLCSCFPIKDLGKASYYLGCHITRDRNSGTLTFDQHQYIHTMAERFGVTK--TRIIPPVAGGKALSKSDSPQTDAEVEEMRQIPY 1746
            C HC   + +R     +  N T      +  D+ GP    SLGG  + +  +D F+R   V  ++ K +V               G KI  +RTD GGE+      F    +     TP    Q NG  ER    L +K   +L     GK  + WAEA+ YA  + NR  SS+L+  T P E+W G+  T +D++  FG+  YY       D  + +     +T        W L T         T    P  +        TS+T        EV+ +EP   TPE     +PR ++   +        +   +D + P T  EA  S E  +WK  +  EM        W++ + PKGK  +G + VF +K     + + +YK RLVA+G+ Q +GI Y +  SP    +SI ++L ++A L  E  QLDV  A+L  E+EEEIY+  PE Y D+  R  V  L +++YGL      W K F   +  + + RS+ D CV+ +  H    + +++YVDD+L+AS ++++ ++    L   F +KDLG+A   LG  I+RDR  G L  +Q QY+  + + FGV +    +  P+A    L+   SP+T+ E E M ++PY
Sbjct:  463 CEHCVLGKQKRVKFGTAIHN-TKGILEYVHSDVWGPSKTPSLGGKHYFVTFVDDFSRRVWVYTMRTKDEVLGVFLKWKTMIENQTGKKIKRLRTDSGGEYKSD--PFFDVCQEYVRDTP----QQNGVAERMNRTLLEKVRCMLSNAGLGK--QFWAEAVTYAGHLVNRLPSSALERKT-PMEVWSGKPATDYDSLHVFGSTAYYHVKESKLDPRVKKALFMGITSGVKGFRLWCLDTKKMICSRDVTFDESPTLKKVADEDIQTSNTPQQELEVEEVLTQEPLS-TPEPVAVARPRREIRRPARFTDMVAYALPVVDDDIPVTYQEAMQSLESDKWKSAMDEEMQSLRKNNTWELAQLPKGKRAIGCKWVFAKKDGSPSKKDVRYKARLVAKGYAQKEGIDYNDVFSPVVKHSSIRILLALVAQLNLELAQLDVKTAFLHGELEEEIYMTQPEGYEDAGGRNWVCKLNKSLYGLKQSPRQWYKRFDSFMRRRKYTRSKYDNCVYLQKLHDRSFIYLLLYVDDMLIASNSQKEIDKLKAQLNEEFEMKDLGEAKKILGMEISRDRQRGKLCLNQKQYLKKVLQCFGVNEYTKHVSTPLASHLKLNAQLSPKTEEEREYMAKVPY 1075          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A8J5YWQ4_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YWQ4_9ROSI)

HSP 1 Score: 231 bits (588), Expect = 6.570e-61
Identity = 186/605 (30.74%), Postives = 283/605 (46.78%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRTDWGAGRLFIDLSGPFHDTSLGGNIFIMLCIDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQFLSFLSKLE-IKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYYDQ-------------ILNRQAVTWHLPTGGTTHRRLPVRRTKTTGYTSTSSTLEVVP---EEPEEETPEIQPRDDLSERSEXXXXXXXSGEQLDP--EPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIE-KYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRK--HVGVLKQAMYGLVHPGLLW*KTFGIELEVKGFQRSQGDPCVFRRIFHGVVVVVIVVYVDDLLVASATKRDGEQAVRDLCSCFPIKDLGKASYYLGCHITRDRNSGTLTFDQHQYIHTMAERFGVTKTR-IIPPVAGGKALSKSDSPQTDAEVEEMRQIPY 1746
            C HC   + +R    +   N  +     +  DL GP    S GG  +++  ID F+R     FLK KSDV +A +   I      G +I  +RTD G E+     + L K E I R  T  +T Q NG  ER    + +K   +L      KS   WAEA + AC + NR  S +++  T P E+W G    + ++  FG   Y                 L  +A           +R++ + R      T+    L +     +E ++   EI+P    +E ++         E +D   EP+   EA +  +  +W   +  EM        W +V+ PKGK  +  + VFK+K    G  E KYK RLVA+G+ QV G+ + +  SP    +SI  +LG++A    E  QLDV  A+L  E+EE+IY++ PE +  S K  +V +LK+++YGL      W K F   +    F+RS  D CV+ +  +    V +++YVDD+L+A+  K +  +    L   F +KDLG A   LG  I RDR +  L   Q  YI  +  RF +   + +  P+A    LS + SPQ+D E+E M  +PY
Sbjct:  606 CEHCVFGKQKRVRFTRGIHNTKET-LEYIHSDLWGPSRVPSRGGANYMLTFIDDFSRKVWAFFLKQKSDVFSAFKSWKIMIEKQTGKQIKYLRTDNGLEFCSDEFNRLCKSEGIVRHLTVRHTPQQNGVAERMNRTIMEKVRCMLSDANLPKS--FWAEAASTACFLINRSPSVAIEKKT-PQEVWSGNPANYSDLKIFGCPAYAHVNNGKLEPRSIKCVFLGYKAGVKGYKLWCPENRKVVISRDVVFDETAMLPNLSLKDSSNKENQKTKREIKPPKKYAE-ADLVAYALNVAEDIDANQEPSNYSEAISCEDSEKWMFAMQEEMESLHKNKTWDLVKLPKGKKTVRCKWVFKKKEGTPGVEEPKYKARLVAKGYSQVPGVDFTDVFSPVVKHSSIRALLGIVAMHDLELEQLDVKTAFLHGELEEDIYMQQPEGFTVSEKEDYVCLLKKSLYGLKQSPRQWYKRFDSFMTSHDFKRSSFDSCVYFKKNNDGSFVYLLLYVDDMLIATKDKGEIRKVKAQLSEEFEMKDLGPAKKILGMEILRDRKTSKLYLSQKGYIEKLLCRFNMRSAKPVSTPLAAHFRLSSALSPQSDDEIEYMSHVPY 1205          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A8J5XRB5_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5XRB5_9ROSI)

HSP 1 Score: 226 bits (577), Expect = 6.630e-61
Identity = 190/652 (29.14%), Postives = 294/652 (45.09%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRTDWGAGRLFIDLSGPFHDTSLGGNIFIMLCIDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQ-FLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPT-FDNIPPFGTVGYYD---------------------------------QILNRQAVTWH------------LPTGGTTH--------------RRLPVRRTKTTGYTSTSSTLEVVPEEPEEETPE----IQPRDDLSERSEXXXXXXXSGEQLDPE-PTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDS--RKHVGVLKQAMYGLVHPGLLW*KTFGIELEVKGFQRSQGDPCVFRRIFHGVVVVVIVVYVDDLLVASATKRDGEQAVRDLCSCFPIKDLGKASYYLGCHITRDRNSGTLTFDQHQYIHTMAERFGVTKT--RIIPPVAGGKALSKSDSPQTDAEVEEMRQIPY 1746
            C HC   + +R     +  N T      +  D+ GP    SLGG  + +  +D F+R   V  ++ K +V               G KI  +RTD GGE+    F     +  I R  T   T Q NG  ER    L +K   +L     GK  + WAEA+ YA  + NR  SS+L+  T P E+W G+  T +D++  FG+  YY                                  +++  + VT+             + T  T                R  PV ++ +          EV+ +EP   TPE     +PR ++   +        +   +D + P T  EA  S E  +WK  +  EM        W++ + PKGK  +G + VF +K   D R   YK RLVA+ + Q +GI Y +  SP    +SI ++L ++A L  E  QLDV  A+L +E+EE+IY+  PE Y D+  R  V  L +++YGL      W K F   +  + + RS+ D CV+ +  H    + +++YVDD+L+AS ++++ ++    L   F +KDLG+A   LG  I+RDR  G L   Q QY+  + + FGV +    +  P+A    L+   SP+T+ E E M ++PY
Sbjct:   31 CEHCVLGKQKRVKFGTAIHN-TKGILEYVHSDVWGPSKTPSLGGKHYFVTFVDDFSRRVWVYTMRTKDEVLGVFLKWKTMIENQTGKKIKRLRTDNGGEYKSDPFFDVCQEYGIVRHFTVRDTPQQNGVAERMNRTLLEKVRCMLSNAGLGK--QFWAEAVTYAGHLVNRLPSSALERKT-PMEVWSGKPATDYDSLHVFGSTAYYHVKESKLDPRAKKALFMGITSGVKGFRLWCLDTKKMICSRDVTFDESPTLKKVTDEDIQTSDTPQQVECTLKQVEFEQVRICPVNKSNSPATMEELEVEEVLTQEPLS-TPEPVAVARPRREIHRPARFTDMVAYALPVVDDDIPVTYQEAMQSLESDKWKSAMDEEMQSLRKNNTWELAQLPKGKRAIGCKWVFAKK---DVR---YKARLVAKSYAQKEGIDYNDVFSPVVKHSSIRILLALVAQLNLELAQLDVKTAFLHSELEEKIYMTQPEGYEDTGGRNWVCKLNKSLYGLKQSPRQWYKRFDSFMRRQKYTRSKYDNCVYLQKLHDRSFIYLLLYVDDMLIASKSQKEIDKLKAQLNEEFEMKDLGEAKMILGMEISRDRQRGKLCLKQKQYLKKVLQCFGVNENTKHVSIPLASHLKLNAQLSPKTEEEKEYMAKVPY 671          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: UPI001C97B5BC (DDE-type integrase/transposase/recombinase n=2 Tax=Actinobacteria TaxID=201174 RepID=UPI001C97B5BC)

HSP 1 Score: 228 bits (580), Expect = 1.000e-60
Identity = 178/635 (28.03%), Postives = 283/635 (44.57%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRTDWGAGRLFIDLSGPFHDTSLGGNIFIMLCIDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEW-HGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYYDQILNRQAVTWHLPTGGTTHRRLPVRRTKTTGY---------------------------------------TSTSSTLEVVPEEPEEETPEIQPRDDLSERS----------EXXXXXXXSGEQLDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKHVGV--LKQAMYGLVHPGLLW*KTFGIELEVKGFQRSQGDPCVFRRIFHGVVVVVIVVYVDDLLVASATKRDGEQAVRDLCSCFPIKDLGKASYYLGCHITRDRNSGTLTFDQHQYIHTMAERFGVTKT-RIIPPVAGGKALSKSDSPQTDAEVEEMRQIPY 1746
            C  C   ++ +      +E   D   G +  D+ GP +  + GG  + +   D  +R   V  +KHKS+     ++   +     G  I  +R+D GGE+   +FL  L++  I  + TPP T Q NG  ER    L D    +L       S   W  A+  A  + NR  S S+    +PYE+WYG++P+  ++  +G+V Y   + N+ A      +        P    ++ GY                                        ST    +  P   E E    QP       S          E         ++   +PTT   A    +  +W++ +  EM    +  VW +V  P+G   +G + ++KRKI  DG++E YK RLVA+G+ Q +G+ YE++ SP     SI ++L + A   +E  Q+DV  A+L   +EE++Y+E P+ +  S +   V  L++++YGL      W   F   ++  GF ++  +PCV++++  G  V  +V+YVDD+L+              L S F +KDLG A+Y LG  I RDR+   L   Q  YI  + +RF +  + R + P   G  LSK  SP+TD E E M +IPY
Sbjct:  158 CEPCLMGKMTKSPFTGHSERAGDI-LGLIHSDVCGPLNKVARGGFTYFITFTDDHSRLGTVYLMKHKSESFEKFKEYRAEVEKQTGKSIKALRSDRGGEYLTTEFLDHLTEAGILSQWTPPGTPQLNGVSERRNRTLMDMVRSMLS--YTDMSISFWGYALETAAYLLNRVPSKSVPK--TPYEMWYGKKPSLKHLRVWGSVAY---VKNQNATKLEARSSKCRFVGYPK---ESLGYYFYHTSEEKVFVSKFAKFLEKEFIQEGGKGQVIDLEELSESTQINTDTTPAPVEAEPTGTQPLRRSGRVSAPPVRYGYLHEMREELFLGDKEHPDDPTTYEGAMLDIDSTRWQQAMESEMDSMYSNQVWTLVNPPEGIVPIGCKWIYKRKIGSDGKVETYKARLVAKGYNQKQGVDYEDTFSPVAMLKSIRILLAIAAHYDYEICQMDVKTAFLNGNIEEDLYMEQPKGFVSSGEDHKVCKLQRSIYGLKQASRSWNIRFNEAVKSFGFLQNMDEPCVYKKV-SGSAVTFLVLYVDDILIIGNDVGMISSIKLWLSSNFSMKDLGDATYILGIKIYRDRSKRLLGLSQSMYIDKILKRFSMENSKRGLLPFRHGIHLSKDMSPKTDQEREHMSKIPY 780          
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Match: A0A438HJ91_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HJ91_VITVI)

HSP 1 Score: 228 bits (582), Expect = 2.220e-60
Identity = 175/653 (26.80%), Postives = 291/653 (44.56%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRTDWGAGRLFIDLSGPFHDTSLGGNIFIMLCIDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGGEWHGQ-----------FLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVMEGKS--DRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPFGT------VGYYDQ----------------------------ILNRQAVTWHLPTGGTTHRRLPVRRTKTTGYTSTSSTLEVVP--------------EEPEEETPEIQPRDDLSERSEXXXXXXXSGEQ-------LDPEPTTMGEAQASSEWPQWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVDMAYLEAEVEEEIYVELPEAY--RDSRKHVGVLKQAMYGLVHPGLLW*KTFGIELEVKGFQRSQGDPCVFRRIFHGVVVVVIVVYVDDLLVASATKRDGEQAVRDLCSCFPIKDLGKASYYLGCHITRDRNSGTLTFDQHQYIHTMAERFGVTKTRI-IPPVAGGKALSKSDSPQTDAEVEEMRQIPY 1746
            C+ C + +     + K   NR       +  D+ GPF   S  G  + +  ID ++R+  +  +  KS   +  ++   +       KI  +R+D GGE++G+           F  +L +  I  + T P T   NG  ER    L+D    ++R ++   +  + LW EA+  A  + NR  S ++    +PYELW  ++P+  ++  +G         +YD                             +   + V   +   G  H             T    TLE+ P              ++P+E   ++  R    ER            Q       L+ +P ++ + + SS   +W   +  EM      GVW ++E PKG   +G + +FK K D  G I +YK RLVA+GF Q +GI Y+E+ SP  ++ S  +++ ++A    E  Q+DV  A+L   ++E IY+  PE +  +DS++ V  LK+++YGL      W + F   +   GF+ +  D C++ + F G   +++V+YVDD+L+AS+      +  R L S F +KDLG AS+ LG  I RDR+ G L   Q  YI  +  RFG++       PVA G   S    P+ + E ++M + PY
Sbjct:  263 CIECIKGKQTN--MRKKNANRCSDVLELIHTDICGPFPTPSWNGQQYFITFIDDYSRYGYLYLIHEKSQSLDVFKNFKAEVENQLSKKIKAVRSDRGGEYYGRYDGSGEQRPGPFAKYLMECGIVPQYTMPGTPSQNGVAERRNRTLKD----MVRSMISHSTLPESLWGEAIKTAVYILNRVPSKAV--AKTPYELWTSKKPSIRHLHVWGYSERSRGFKFYDPSTRSFFETGNAKFIEDVELSGREPLRKVVFEEEFVNIPIIAAGHGHIMFNDTIQNVQSITGIQDTLEIPPAQVMEPIQVHQEVTQQPQEPQVQVPLRRSTRERRSTISDDYVVYLQEHEFDMGLEDDPISVSQVKQSSNSEKWIEAMKDEMKSMKDNGVWDLIELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESKDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLK-FSGSKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNCAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPY 906          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84153.16029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R6RYD4_ACTCC7.570e-6630.20Endonuclease n=2 Tax=Actinidia chinensis var. chin... [more]
A0A7N2KXD4_QUELO3.460e-6329.54Uncharacterized protein n=1 Tax=Quercus lobata Tax... [more]
A0A5A7QRB1_STRAF6.650e-6329.24Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=... [more]
A0A4Y2GYT7_ARAVE1.300e-6229.54Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J5ZH56_9ROSI4.060e-6230.74Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J6DEC3_9ROSI1.080e-6130.61Integrase catalytic domain-containing protein n=2 ... [more]
A0A8J5YWQ4_9ROSI6.570e-6130.74Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5XRB5_9ROSI6.630e-6129.14Integrase catalytic domain-containing protein n=1 ... [more]
UPI001C97B5BC1.000e-6028.03DDE-type integrase/transposase/recombinase n=2 Tax... [more]
A0A438HJ91_VITVI2.220e-6026.80Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84153contigH-elongata_contig84153:13..2374 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score152.1
Seed ortholog evalue5.3e-34
Seed eggNOG ortholog3641.EOY17849
KEGG koko:K20093
EggNOG free text desc.Mitochondrial protein
EggNOG OGs37THH@33090,3GG2K@35493,COG2801@1,KOG0017@2759
EC3.6.4.12
COG Functional cat.O
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Exons4
Model size1918
Cds size1185
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84153.16029.1prot_H-elongata_contig84153.16029.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig84153 602..2230 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931246.7179725-UTR-H-elongata_contig84153:12..6011622931246.7179725-UTR-H-elongata_contig84153:12..601Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig84153 13..601 -
1691679758.1804323-UTR-H-elongata_contig84153:12..6011691679758.1804323-UTR-H-elongata_contig84153:12..601Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig84153 13..601 -
1622931246.8010414-UTR-H-elongata_contig84153:2230..23741622931246.8010414-UTR-H-elongata_contig84153:2230..2374Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig84153 2231..2374 -
1691679758.2386453-UTR-H-elongata_contig84153:2230..23741691679758.2386453-UTR-H-elongata_contig84153:2230..2374Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig84153 2231..2374 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931246.7318633-CDS-H-elongata_contig84153:601..10941622931246.7318633-CDS-H-elongata_contig84153:601..1094Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84153 602..1094 -
1691679758.190125-CDS-H-elongata_contig84153:601..10941691679758.190125-CDS-H-elongata_contig84153:601..1094Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84153 602..1094 -
1622931246.7509732-CDS-H-elongata_contig84153:1398..15721622931246.7509732-CDS-H-elongata_contig84153:1398..1572Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84153 1399..1572 -
1691679758.1983397-CDS-H-elongata_contig84153:1398..15721691679758.1983397-CDS-H-elongata_contig84153:1398..1572Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84153 1399..1572 -
1622931246.7657363-CDS-H-elongata_contig84153:1605..16541622931246.7657363-CDS-H-elongata_contig84153:1605..1654Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84153 1606..1654 -
1691679758.2065449-CDS-H-elongata_contig84153:1605..16541691679758.2065449-CDS-H-elongata_contig84153:1605..1654Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84153 1606..1654 -
1622931246.7793639-CDS-H-elongata_contig84153:1761..22301622931246.7793639-CDS-H-elongata_contig84153:1761..2230Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84153 1762..2230 -
1691679758.2262616-CDS-H-elongata_contig84153:1761..22301691679758.2262616-CDS-H-elongata_contig84153:1761..2230Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig84153 1762..2230 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig84153.16029.1

>prot_H-elongata_contig84153.16029.1 ID=prot_H-elongata_contig84153.16029.1|Name=mRNA_H-elongata_contig84153.16029.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=395bp
MLCIDVFTRFKMVRFLKHKSDVTNALRDIIIDYFAPEGVKIGVIRTDGGG
EWHGQFLSFLSKLEIKRESTPPYTSQYNGTVERALGLLRDKTVVLLRGVM
EGKSDRLWAEAMAYACGMWNRCISSSLDSGTSPYELWYGRRPTFDNIPPF
GTVGYYDQILNRQAVTWHLPTGGTTHRRLPVRRTKTTGYTSTSSTLEVVP
EEPEEETPEIQPRDDLSERSEPADDASESGEQLDPEPTTMGEAQASSEWP
QWKRVIAREMGGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKY
KCRLVAQGFRQVKGIHYEESSSPTPAQASISMVLGMIATLGWEARQLDVD
MAYLEAEVEEEIYVELPEAYRDSRKHVGVLKQAMYGLVHPGLLW*
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mRNA from alignment at H-elongata_contig84153:13..2374-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig84153.16029.1 ID=mRNA_H-elongata_contig84153.16029.1|Name=mRNA_H-elongata_contig84153.16029.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2362bp|location=Sequence derived from alignment at H-elongata_contig84153:13..2374- (Himanthalia elongata Himel1 dioecious)
TGCGTACACTGCTCCGAATCTAGAGTGCGGCGATACGCCGTGCCTAAATC CACGGAGAATCGGACTGACTGGGGCGCGGGACGGCTGTTTATTGATCTCT CAGGCCCCTTTCACGATACGTCTCTCGGAGGAAACATATTCATCATGCTG TGCATTGACGTCTTCACCCGCTTCAAAATGGTCCGTTTCCTCAAGCACAA GAGCGACGTCACGAATGCGTTAAGGGACATAATCATCGACTACTTCGCGC CCGAGGGCGTCAAGATCGGCGTCATCCGCACGGATGGTGGGGGGGAATGG CACGGCCAGTTCCTGTCTTTCCTGAGTAAGCTCGAAATCAAGCGCGAGTC CACACCCCCATATACCTCCCAATACAATGGCACCGTGGAGCGCGCTCTGG GGCTACTACGCGACAAGACCGTGGTCCTTCTGCGAGGTGTAATGGAGGGT AAGAGCGACCGTCTATGGGCGGAAGCTATGGCGTACGCATGCGGTATGTG GAATCGATGTATTTCCTCCTCCCTCGACAGCGGCACCTCGCCATATGAGC TTTGGTACGGCCGACGGCCGACATTCGACAACATCCCCCCATTCGGGACC GTGGGATATTACGGTCGAAGCCGGGGCACAAACTCGCCCCCCGCGGGGCG AGCTGCATCATGCTCGGGCTGACCCCCAACTGCCCGCTGGACACTTTCCA GGTGCGTAACATAACCACAGACCAGATCCTCAACCGTCAAGCCGTCACAT GGCACCTCCCGACCGGGGGGTAGGGGAACACGCCCCTTTCCGCACCATCC AGGACCACACATAGGCGCCTACCCGTGCGGCGCACGAAAACCACGGGCTA TACGTCAACATCAAGCACCTTGGAAGTCGTACCGGAAGAACCGGAGGAAG AGACGCCTGAAATCCAACCGCGAGACGACCTTTCGGAGCGGAGTGAGCCT GCCGATGATGCGTCCGAATCAGGTGAGTTGAAGGACGACGGACCGGAACG GGGTGATTTGGACTACGAGCCGGAGGGGGGGGTAGAAGAAAAAGAGTCGA GCGGCGCCGCCCATAAGGTACCAGCTGCTGTGCGACAACTCTACAACTCC TTCACCGGCGAACCGCACCCCTCGTCCCGGAGTCGCACGAGGAGTGGAAA AAAGCTTCGTCCAGGACGACCTAAGCATCGCCCTTTTGGGGGCGGGTTAT AGCGTCAAGACACTGCCACCCCTGATGCGCGCACCCTGCCGTACCCTCGG CGAGGGTGTCCCGACGTGCGGGTCCGCGAGACAGCTAGACCCAGAGCCGA CAACCATGGGCGAGGCGCAAGCGTCGTCGGAGTGGCCGCAATGGAAAAGG GTGATCGCACGCGAGATGGGTGGGCAAACTGCTCGAGGCGTGTGGCAGGT GGTGGAGCGCCCAAAAGGGAAGACGGTGTTGGGCACGAGAGTAGTTTTCA AGCGCAAAATCGACAAGGATGGAAGGATCGAGAAGTACAAATGTCGTCTC GTGGCGCAGGGTTTCAGGCAGGTCAAAGGCATACACTACGAGGAATCCTC CTCTCCGACTCCTGCGCAGGCCAGCATTAGCATGGTACTGGGCATGATCG CGACTCTCGGCTGGGAGGCGCGACAGCTGGATGTCGACATGGCCTACCTG GAGGCCGAAGTTGAGGAGGAGATTTACGTTGAGCTCCCGGAGGCATACCG TGACTCCAGGAAGCATGTCGGTGTACTAAAACAGGCAATGTACGGACTCG TCCACCCCGGGCTGTTGTGGTAAAAAACGTTCGGGATTGAGCTCGAGGTG AAGGGTTTCCAGAGATCTCAAGGCGACCCATGCGTGTTCCGGCGGATTTT CCACGGGGTAGTGGTAGTCGTCATTGTGGTCTACGTCGACGACCTGCTGG TTGCTAGTGCGACGAAACGTGACGGGGAGCAAGCGGTGAGGGACCTGTGC TCCTGTTTCCCGATCAAGGACCTGGGGAAGGCTTCGTACTACCTGGGATG CCACATCACGCGGGACCGGAACTCCGGGACACTGACGTTCGACCAGCATC AGTACATACATACTATGGCGGAACGTTTTGGCGTGACGAAGACCAGAATC ATCCCGCCCGTGGCAGGAGGAAAAGCCCTTTCGAAATCAGACAGCCCGCA AACGGACGCAGAGGTTGAAGAAATGCGCCAGATTCCCTACCCGATAAATC GTTGGGGCCCTAATGTGGGCAGCGACGATGACCAGGCCCGACATTTTATT CGCTGCGCACCAACTGGCGAAATTCAACGACAACCCGGGACCGACACACT GGAGGGCAGCCCAGAAAGCGCTGCAATATTTATGGCGCACTCGGGACCTC GGGATCACCTAC
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Coding sequence (CDS) from alignment at H-elongata_contig84153:13..2374-

>mRNA_H-elongata_contig84153.16029.1 ID=mRNA_H-elongata_contig84153.16029.1|Name=mRNA_H-elongata_contig84153.16029.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2370bp|location=Sequence derived from alignment at H-elongata_contig84153:13..2374- (Himanthalia elongata Himel1 dioecious)
ATGCTGTGCATTGACGTCTTCACCCGCTTCAAAATGGTCCGTTTCCTCAA
GCACAAGAGCGACGTCACGAATGCGTTAAGGGACATAATCATCGACTACT
TCGCGCCCGAGGGCGTCAAGATCGGCGTCATCCGCACGGATGGTGGGGGG
GAATGGCACGGCCAGTTCCTGTCTTTCCTGAGTAAGCTCGAAATCAAGCG
CGAGTCCACACCCCCATATACCTCCCAATACAATGGCACCGTGGAGCGCG
CTCTGGGGCTACTACGCGACAAGACCGTGGTCCTTCTGCGAGGTGTAATG
GAGGGTAAGAGCGACCGTCTATGGGCGGAAGCTATGGCGTACGCATGCGG
TATGTGGAATCGATGTATTTCCTCCTCCCTCGACAGCGGCACCTCGCCAT
ATGAGCTTTGGTACGGCCGACGGCCGACATTCGACAACATCCCCCCATTC
GGGACCGTGGGATATTACGATGCTGTGCATTGACGTCTTCACCCGCTTCA
AAATGGTCCGTTTCCTCAAGCACAAGAGCGACGTCACGAATGCGTTAAGG
GACATAATCATCGACTACTTCGCGCCCGAGGGCGTCAAGATCGGCGTCAT
CCGCACGGATGGTGGGGGGGAATGGCACGGCCAGTTCCTGTCTTTCCTGA
GTAAGCTCGAAATCAAGCGCGAGTCCACACCCCCATATACCTCCCAATAC
AATGGCACCGTGGAGCGCGCTCTGGGGCTACTACGCGACAAGACCGTGGT
CCTTCTGCGAGGTGTAATGGAGGGTAAGAGCGACCGTCTATGGGCGGAAG
CTATGGCGTACGCATGCGGTATGTGGAATCGATGTATTTCCTCCTCCCTC
GACAGCGGCACCTCGCCATATGAGCTTTGGTACGGCCGACGGCCGACATT
CGACAACATCCCCCCATTCGGGACCGTGGGATATTACGACCAGATCCTCA
ACCGTCAAGCCGTCACATGGCACCTCCCGACCGGGGGACCAGATCCTCAA
CCGTCAAGCCGTCACATGGCACCTCCCGACCGGGGGGACCACACATAGGC
GCCTACCCGTGCGGCGCACGAAAACCACGGGCTATACGTCAACATCAAGC
ACCTTGGAAGTCGTACCGGAAGAACCGGAGGAAGAGACGCCTGAAATCCA
ACCGCGAGACGACCTTTCGGAGCGGAGTGAGCCTGCCGATGATGCGTCCG
AATCAGGTGAGACCACACATAGGCGCCTACCCGTGCGGCGCACGAAAACC
ACGGGCTATACGTCAACATCAAGCACCTTGGAAGTCGTACCGGAAGAACC
GGAGGAAGAGACGCCTGAAATCCAACCGCGAGACGACCTTTCGGAGCGGA
GTGAGCCTGCCGATGATGCGTCCGAATCAGGTGAACAGCTAGACCCAGAG
CCGACAACCATGGGCGAGGCGCAAGCGTCGTCGGAGTGGCCGCAATGGAA
AAGGGTGATCGCACGCGAGATGGGTGGGCAAACTGCTCGAGGCGTGTGGC
AGGTGGTGGAGCGCCCAAAAGGGAAGACGGTGTTGGGCACGAGAGTAGTT
TTCAAGCGCAAAATCGACAAGGATGGAAGGATCGAGAAGTACAAATGTCG
TCTCGTGGCGCAGGGTTTCAGGCAGGTCAAAGGCATACACTACGAGGAAT
CCTCCTCTCCGACTCCTGCGCAGGCCAGCATTAGCATGGTACTGGGCATG
ATCGCGACTCTCGGCTGGGAGGCGCGACAGCTGGATGTCGACATGGCCTA
CCTGGAGGCCGAAGTTGAGGAGGAGATTTACGTTGAGCTCCCGGAGGCAT
ACCGTGACTCCAGGAAGCATGTCGGTGTACTAAAACAGGCAATGTACGGA
CTCGTCCACCCCGGGCTGTTGTGGTAAACAGCTAGACCCAGAGCCGACAA
CCATGGGCGAGGCGCAAGCGTCGTCGGAGTGGCCGCAATGGAAAAGGGTG
ATCGCACGCGAGATGGGTGGGCAAACTGCTCGAGGCGTGTGGCAGGTGGT
GGAGCGCCCAAAAGGGAAGACGGTGTTGGGCACGAGAGTAGTTTTCAAGC
GCAAAATCGACAAGGATGGAAGGATCGAGAAGTACAAATGTCGTCTCGTG
GCGCAGGGTTTCAGGCAGGTCAAAGGCATACACTACGAGGAATCCTCCTC
TCCGACTCCTGCGCAGGCCAGCATTAGCATGGTACTGGGCATGATCGCGA
CTCTCGGCTGGGAGGCGCGACAGCTGGATGTCGACATGGCCTACCTGGAG
GCCGAAGTTGAGGAGGAGATTTACGTTGAGCTCCCGGAGGCATACCGTGA
CTCCAGGAAGCATGTCGGTGTACTAAAACAGGCAATGTACGGACTCGTCC
ACCCCGGGCTGTTGTGGTAA
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