mRNA_H-elongata_contig82751.15915.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig82751.15915.1
Unique NamemRNA_H-elongata_contig82751.15915.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig82751.15915.1 vs. uniprot
Match: A0A6H5K1Z6_9PHAE (RRF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Z6_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 7.460e-89
Identity = 140/168 (83.33%), Postives = 154/168 (91.67%), Query Frame = 1
Query:    1 LQGLKHDFQGLRGGKTDPAMLDSVRVESYGSMSALSTVAQASMKGPQLIVLSVYDSAMTKAVEDAVRECDMGLNPSSEGQGQVHVPIPKPTKESREAVAKIAAKHAEKSKVVLRGIRHKIQDQIKKKKDSFPEDEVHQRMKEVDKCTQDAEANAGKMLEKKKAEILTV 504
            LQGL  +FQGLRGGKTDP MLD+V+VESYGSM+ L++VAQASMKGPQLI+LSVYD  MTKA+EDAVREC MGLNP SEGQGQVHVPIPKPTKESREAVAK+AAKHAEKSKVV+RGIRHKI DQIKKKKDSFPED+VH R+KE+DKCT+DAEA    MLEKKKAEILTV
Sbjct:  132 LQGLTRNFQGLRGGKTDPGMLDNVKVESYGSMTNLASVAQASMKGPQLIILSVYDPGMTKAIEDAVRECGMGLNPYSEGQGQVHVPIPKPTKESREAVAKVAAKHAEKSKVVVRGIRHKILDQIKKKKDSFPEDDVHMRIKEIDKCTKDAEAGIASMLEKKKAEILTV 299          
BLAST of mRNA_H-elongata_contig82751.15915.1 vs. uniprot
Match: A0A836CM55_9STRA (Ribosome recycling factor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM55_9STRA)

HSP 1 Score: 141 bits (355), Expect = 8.610e-38
Identity = 85/177 (48.02%), Postives = 111/177 (62.71%), Query Frame = 1
Query:    1 LQGLKHDFQGLRGGKTDPAMLDSVRVESYGSMSALSTVAQASMKGPQLIVLSVYDSAMTKAVEDAVRECDMGLNPSSEGQG----------QVHVPIPKPTKESREAVAKIAAKHAEKSKVVLRGIRHKIQDQIKKKKDSFPEDEVHQRMKEVDKCTQDAEANAGKMLEKKKAEILT 501
            L+GLK D   LRGG+ DPAM D + V SYG    LS+VAQ S KGPQL+VL+ YD A   AV  AVR+  M LNP  +G             V VPIPK + E+RE++ K+A K  EK+KV +RGIRHK+ +++KK K +F ED+VH+R KE+D      EA     L+ KK +IL+
Sbjct:  158 LEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKKHKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDILS 334          
BLAST of mRNA_H-elongata_contig82751.15915.1 vs. uniprot
Match: UPI001BA79AAC (ribosome recycling factor n=1 Tax=Roseomonas terrae TaxID=424799 RepID=UPI001BA79AAC)

HSP 1 Score: 123 bits (309), Expect = 1.720e-32
Identity = 74/170 (43.53%), Postives = 106/170 (62.35%), Query Frame = 1
Query:    1 LQGLKHDFQGLRGGKTDPAMLDSVRVESYGSMSALSTVAQASMKGPQLIVLSVYDSAMTKAVEDAVRECDMGLNPSSEGQGQVHVPIPKPTKESREAVAKIAAKHAEKSKVVLRGIRHKIQDQIKK--KKDSFPEDEVHQRMKEVDKCTQDAEANAGKMLEKKKAEILTV 504
            ++ LK +FQGLR G+  PA+L+ VRVE+YGS++ L+ VA  S+ GP L+ + V+D  +TKAVE A+RE ++GLNP +EGQ  + VP+P  T E R  + K AA++AE ++V +RG+R    +Q K   KK    EDEV Q   E+ K T          L  K+ +I TV
Sbjct:   20 IETLKKEFQGLRTGRASPALLEPVRVEAYGSVTPLNQVANVSIAGPGLLSVQVWDKGLTKAVESAIREANLGLNPQAEGQ-VIRVPLPPLTAERRNELVKAAARYAESTRVAIRGVRRDGMEQAKGWIKKHEASEDEVKQAETEIQKLTDQYVKQVDASLVDKEKDIRTV 188          
BLAST of mRNA_H-elongata_contig82751.15915.1 vs. uniprot
Match: A0A840XNP9_9PROT (Ribosome-recycling factor n=12 Tax=Roseomonas TaxID=125216 RepID=A0A840XNP9_9PROT)

HSP 1 Score: 123 bits (308), Expect = 2.440e-32
Identity = 72/170 (42.35%), Postives = 108/170 (63.53%), Query Frame = 1
Query:    1 LQGLKHDFQGLRGGKTDPAMLDSVRVESYGSMSALSTVAQASMKGPQLIVLSVYDSAMTKAVEDAVRECDMGLNPSSEGQGQVHVPIPKPTKESREAVAKIAAKHAEKSKVVLRGIRHKIQDQIKK--KKDSFPEDEVHQRMKEVDKCTQDAEANAGKMLEKKKAEILTV 504
            ++ LK +F GLR G+  PA+L+ +RVE+YGSM+ L+ VA  S+ GP L+ + V+D A+TK VE A+RE ++GLNP +EGQ  + VP+P  T E R  +AK AA++AE+++V +RG+R    +Q+K   KK    EDE  +   E+ K T          L +K+ +I TV
Sbjct:   20 METLKKEFAGLRTGRASPALLEPIRVEAYGSMTPLNQVANISVAGPGLLSVQVWDKALTKHVESAIREANLGLNPQAEGQ-VIRVPLPPLTTERRNELAKAAARYAEQTRVAIRGVRRDGMEQVKAWVKKHETSEDEAKRAEDEIQKLTDQYVKQVDAALAEKEKDIRTV 188          
BLAST of mRNA_H-elongata_contig82751.15915.1 vs. uniprot
Match: A0A4R0Y5H3_9PROT (Ribosome-recycling factor n=4 Tax=Acetobacteraceae TaxID=433 RepID=A0A4R0Y5H3_9PROT)

HSP 1 Score: 117 bits (292), Expect = 6.540e-30
Identity = 71/170 (41.76%), Postives = 107/170 (62.94%), Query Frame = 1
Query:    1 LQGLKHDFQGLRGGKTDPAMLDSVRVESYGSMSALSTVAQASMKGPQLIVLSVYDSAMTKAVEDAVRECDMGLNPSSEGQGQVHVPIPKPTKESREAVAKIAAKHAEKSKVVLRGIRHKIQDQIK--KKKDSFPEDEVHQRMKEVDKCTQDAEANAGKMLEKKKAEILTV 504
            L+ LK +F GLR G+  P++L+ +RVE+YGS   L+ VA  S+ GP ++ + V+D ++TKAVE A+R+  +GLNP SEGQ  + V +P  T++ R  +AK AAK++E +KV +RG+R    +QI+  KKK    ED+  +   EV K T D        L +K+ +I TV
Sbjct:   22 LETLKKEFAGLRTGRASPSLLEPIRVEAYGSNQPLAQVANVSVAGPSMLQVQVWDRSVTKAVEIAIRDSGLGLNPQSEGQ-TIRVMLPPLTEQRRNELAKTAAKYSEGAKVAIRGVRRDGMEQIQGWKKKSEIGEDDAKRWSDEVQKLTDDYVKKIDVSLAEKEKDIKTV 190          
BLAST of mRNA_H-elongata_contig82751.15915.1 vs. uniprot
Match: A0A841GSD5_9BACT (Ribosome-recycling factor n=1 Tax=Longimicrobium terrae TaxID=1639882 RepID=A0A841GSD5_9BACT)

HSP 1 Score: 115 bits (288), Expect = 2.160e-29
Identity = 64/170 (37.65%), Postives = 106/170 (62.35%), Query Frame = 1
Query:    1 LQGLKHDFQGLRGGKTDPAMLDSVRVESYGSMSALSTVAQASMKGPQLIVLSVYDSAMTKAVEDAVRECDMGLNPSSEGQGQVHVPIPKPTKESREAVAKIAAKHAEKSKVVLRGIRHKIQDQIK--KKKDSFPEDEVHQRMKEVDKCTQDAEANAGKMLEKKKAEILTV 504
            ++ L+ DFQ +R GK +PA+LDSVRVE+YG++  L+ V   S   P+++ +  +D    KA+E A+RE D+GLNPS++G   V +PIP  T++ R    K+  K AE+++V +R +R    D++K  +K D   ED++ +   +V K T    A   +M++ K+AE++ V
Sbjct:   15 IEALRRDFQSVRTGKANPALLDSVRVEAYGNLMPLNQVGTVSAPEPRMLTIQPWDKTQIKAIEKALRESDLGLNPSNDGN-LVRIPIPALTEDRRREFVKMLHKMAEEARVAVRQVRKDANDEVKARQKDDGLSEDDIRREQGDVQKLTDQYVAKVEEMVKAKEAEVMEV 183          
BLAST of mRNA_H-elongata_contig82751.15915.1 vs. uniprot
Match: R6HZC7_9PROT (Ribosome-recycling factor n=3 Tax=Azospirillum TaxID=191 RepID=R6HZC7_9PROT)

HSP 1 Score: 115 bits (288), Expect = 2.410e-29
Identity = 69/170 (40.59%), Postives = 110/170 (64.71%), Query Frame = 1
Query:    1 LQGLKHDFQGLRGGKTDPAMLDSVRVESYGSMSALSTVAQASMKGPQLIVLSVYDSAMTKAVEDAVRECDMGLNPSSEGQGQVHVPIPKPTKESREAVAKIAAKHAEKSKVVLRGIRHKIQDQIKK-KKDS-FPEDEVHQRMKEVDKCTQDAEANAGKMLEKKKAEILTV 504
            ++ L+ DF  LR G+   ++LD + VE+YGSM+ LS V   S+  P+ + +S++D ++ KAV+ A+RE D+GLNP+S+GQ  + +PIP  ++E R+ + KIA K+AE++KV +R IR    D +KK KKD+   EDE  +   E+ K T ++     +ML  K+ +IL V
Sbjct:   19 IETLRGDFGSLRAGRAHVSLLDGIMVEAYGSMTPLSQVGTVSVPDPRTLSISIWDRSLAKAVDKALRESDLGLNPASDGQ-LIRIPIPPLSEERRKELVKIAGKYAEQNKVAIRNIRRDALDDVKKLKKDNQISEDEEKRFENEIQKLTDESIKKIEEMLSAKEKDILQV 187          
BLAST of mRNA_H-elongata_contig82751.15915.1 vs. uniprot
Match: UPI001BACEF9D (ribosome recycling factor n=2 Tax=Roseomonas TaxID=125216 RepID=UPI001BACEF9D)

HSP 1 Score: 115 bits (288), Expect = 2.610e-29
Identity = 71/172 (41.28%), Postives = 106/172 (61.63%), Query Frame = 1
Query:    1 LQGLKHDFQGLRGGKTDPAMLDSVRVESYGSMSALSTVAQASMKGPQLIVLSVYDSAMTKAVEDAVRECDMGLNPSSEGQGQVHVPIPKPTKESREAVAKIAAKHAEKSKVVLRGIRHKIQDQIKK----KKDSFPEDEVHQRMKEVDKCTQDAEANAGKMLEKKKAEILTV 504
            ++ L+ +F GLR G+  PA+L+ VRVE+YG  S L+ VA  S+ GP L+V+ V+D ++TKAVE A+R+  +GLNP +EGQ  + VP+P  T+E R  + K A K+AE S+V +RG+R    +++K     KK    EDE  +   EV K T         +L +K+ +I TV
Sbjct:   20 IETLRKEFAGLRTGRASPALLEPVRVEAYGGNSPLNQVANISVGGPGLLVVQVFDRSLTKAVEVAIRDSGLGLNPQAEGQ-VIRVPLPPLTQERRNDLVKTAHKYAEASRVAIRGVRRDGMERVKAMTADKKAPISEDEGKRTQDEVQKLTDQYIKQVDTLLAEKEKDIKTV 190          
BLAST of mRNA_H-elongata_contig82751.15915.1 vs. uniprot
Match: UPI001080271D (ribosome recycling factor n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI001080271D)

HSP 1 Score: 114 bits (286), Expect = 5.210e-29
Identity = 63/140 (45.00%), Postives = 95/140 (67.86%), Query Frame = 1
Query:    1 LQGLKHDFQGLRGGKTDPAMLDSVRVESYGSMSALSTVAQASMKGPQLIVLSVYDSAMTKAVEDAVRECDMGLNPSSEGQGQVHVPIPKPTKESREAVAKIAAKHAEKSKVVLRGIRHKIQDQIKK----KKDSFPEDEV 408
            ++ L+ +F GLR G+  PA+L+ +RVE+YG +S L+ VA  S+ GP L+ + V+D A+ KAVE A+RE ++GLNP +EGQ  + VP+P  T+E R  +AK AA++AE+++V +RG+R    +QIK     KK    EDE 
Sbjct:   20 METLRKEFAGLRTGRASPALLEPIRVEAYGGVSPLNQVANISVAGPGLLSVQVWDKALVKAVESAIREANLGLNPQTEGQ-VIRVPLPPLTQERRNELAKAAARYAEQTRVAIRGVRRDGMEQIKALVHDKKAPISEDEA 158          
BLAST of mRNA_H-elongata_contig82751.15915.1 vs. uniprot
Match: A0A6V1LRG3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LRG3_HETAK)

HSP 1 Score: 116 bits (291), Expect = 7.400e-29
Identity = 63/144 (43.75%), Postives = 93/144 (64.58%), Query Frame = 1
Query:    1 LQGLKHDFQGLRGGKTDPAMLDSVRVESYGSMSALSTVAQASMKGPQLIVLSVYDSAMTKAVEDAVRECDMGLNPSSEGQGQVHVPIPKPTKESREAVAKIAAKHAEKSKVVLRGIRHKIQDQIKKKKDSFPEDEVHQRMKEVD 432
            +Q L  D + LR G+ DPAM D ++V++YG  + LS VA  + +GPQL+V++VYD  +  AV+ A+REC MGLNP +   G + VP+PK +KE RE +A++A +  EK+K  +R  R    D+ KK     PEDE  + +KE+D
Sbjct:  108 IQALDKDLRTLRAGRADPAMFDHLQVDAYGQSAPLSAVADVAPRGPQLLVVNVYDPQLKGAVDTAIRECGMGLNPQALEGGALSVPVPKTSKEKREKLARMAKQQGEKTKQNVRNARRSAIDETKKA--GLPEDESKRLVKEID 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82751.15915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1Z6_9PHAE7.460e-8983.33RRF domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CM55_9STRA8.610e-3848.02Ribosome recycling factor domain-containing protei... [more]
UPI001BA79AAC1.720e-3243.53ribosome recycling factor n=1 Tax=Roseomonas terra... [more]
A0A840XNP9_9PROT2.440e-3242.35Ribosome-recycling factor n=12 Tax=Roseomonas TaxI... [more]
A0A4R0Y5H3_9PROT6.540e-3041.76Ribosome-recycling factor n=4 Tax=Acetobacteraceae... [more]
A0A841GSD5_9BACT2.160e-2937.65Ribosome-recycling factor n=1 Tax=Longimicrobium t... [more]
R6HZC7_9PROT2.410e-2940.59Ribosome-recycling factor n=3 Tax=Azospirillum Tax... [more]
UPI001BACEF9D2.610e-2941.28ribosome recycling factor n=2 Tax=Roseomonas TaxID... [more]
UPI001080271D5.210e-2945.00ribosome recycling factor n=1 Tax=Crenalkalicoccus... [more]
A0A6V1LRG3_HETAK7.400e-2943.75Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82751contigH-elongata_contig82751:687..2711 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.9
Seed ortholog evalue2.1e-64
Seed eggNOG ortholog2880.D7G7A5
Preferred nameRRF1
KEGG koko:K02838,ko:K03283
KEGG TC1.A.33.1
KEGG Pathwayko03040,ko04010,ko04141,ko04144,ko04213,ko04612,ko04915,ko05134,ko05145,ko05162,ko05164,ko05169,map03040,map04010,map04141,map04144,map04213,map04612,map04915,map05134,map05145,map05162,map05164,map05169
KEGG ModuleM00353,M00355
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006996,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032543,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0070126,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0140053,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008
EggNOG free text desc.ribosomal large subunit binding
EggNOG OGsCOG0233@1,KOG4759@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01009,ko03009,ko03012,ko03029,ko03041,ko03051,ko03110,ko04131,ko04147,ko04516
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibosome recycling factor
Ec32 orthologEc-04_003560.1
Exons5
Model size507
Cds size507
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82751.15915.1prot_H-elongata_contig82751.15915.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig82751 687..2711 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931233.4487836-CDS-H-elongata_contig82751:686..7411622931233.4487836-CDS-H-elongata_contig82751:686..741Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82751 687..741 +
1691679752.7830334-CDS-H-elongata_contig82751:686..7411691679752.7830334-CDS-H-elongata_contig82751:686..741Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82751 687..741 +
1622931233.4727023-CDS-H-elongata_contig82751:1235..13511622931233.4727023-CDS-H-elongata_contig82751:1235..1351Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82751 1236..1351 +
1691679752.802741-CDS-H-elongata_contig82751:1235..13511691679752.802741-CDS-H-elongata_contig82751:1235..1351Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82751 1236..1351 +
1622931233.4887805-CDS-H-elongata_contig82751:1759..19121622931233.4887805-CDS-H-elongata_contig82751:1759..1912Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82751 1760..1912 +
1691679752.8159416-CDS-H-elongata_contig82751:1759..19121691679752.8159416-CDS-H-elongata_contig82751:1759..1912Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82751 1760..1912 +
1622931233.5136886-CDS-H-elongata_contig82751:2307..24091622931233.5136886-CDS-H-elongata_contig82751:2307..2409Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82751 2308..2409 +
1691679752.824484-CDS-H-elongata_contig82751:2307..24091691679752.824484-CDS-H-elongata_contig82751:2307..2409Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82751 2308..2409 +
1622931233.5382512-CDS-H-elongata_contig82751:2630..27111622931233.5382512-CDS-H-elongata_contig82751:2630..2711Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82751 2631..2711 +
1691679752.8327985-CDS-H-elongata_contig82751:2630..27111691679752.8327985-CDS-H-elongata_contig82751:2630..2711Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82751 2631..2711 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig82751.15915.1

>prot_H-elongata_contig82751.15915.1 ID=prot_H-elongata_contig82751.15915.1|Name=mRNA_H-elongata_contig82751.15915.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp
LQGLKHDFQGLRGGKTDPAMLDSVRVESYGSMSALSTVAQASMKGPQLIV
LSVYDSAMTKAVEDAVRECDMGLNPSSEGQGQVHVPIPKPTKESREAVAK
IAAKHAEKSKVVLRGIRHKIQDQIKKKKDSFPEDEVHQRMKEVDKCTQDA
EANAGKMLEKKKAEILTV*
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mRNA from alignment at H-elongata_contig82751:687..2711+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig82751.15915.1 ID=mRNA_H-elongata_contig82751.15915.1|Name=mRNA_H-elongata_contig82751.15915.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2025bp|location=Sequence derived from alignment at H-elongata_contig82751:687..2711+ (Himanthalia elongata Himel1 dioecious)
TTGCAGGGACTCAAGCACGACTTCCAGGGATTGCGGGGGGGCAAGACAGA TCCAGGTGGGCTCGGCCGGATATATCTCACGATAGAATCTGGCGTTGTTC GAGCGCATCAGACGAAATCAACAAATGGTCAACTCTCCGTCAAATGATGT AGGCGGCGATGGCGACTGACTTCCCGTGTGATGCTCCGTTGTGAAGTACT GGTGGTTCTAATGGCTAAAGCCCGTCCGCGATGGCGCTGCCGAGGCAGCG AGGAGTGTGCCATACGTGATTTCGTGTTGACGCGGATCGATTGTCGATCA AACATGGCGTTCCCGAATCGTCTGCATGATACCATGTATTTAGACCGCAT TCGTCGCACCCGGATGCAAATTGCTCCACGCGCTACGTACCCGCCACGTC ATATCAAACACACCTTCTTCGCCCATACTGTCCTTAGAAGACAATACTGT AGCAAGGATTTTTGGTAAGTCAGGCAATTATCTGCCCGACGCTTTCCGCT GTCGATGTCGCAACACCCGTGTGTTGCCGTTCCTTGGCTCGCCTCGCAGC GATGCTGGACAGCGTTAGGGTTGAGTCTTACGGATCAATGTCAGCCCTGT CCACCGTGGCACAAGCATCCATGAAAGGGCCACAGCTCATCGTCCTCTCC GTTTACGACTCGGCGGTGAGTGTCGCAACCGCGCAAGCGGGTGGTATTGG CGTGCCGCGGTGCGGCGCGCGATGATGTCTTCACATCACGACGTCGGCGT ACCAGTGGCCAGCAGACTGTAACCCGTGCATACGCTGGAGGTTGGTGAAT TAGGGGTATGTCACGTTTTTTGTTTCAAAAGGACTTCGTTTGCATTCGAA AAGACTCACAAAAACACCATCCGACTCATAATAGCTCTAATCCAATTGAT GTCCTTTTTTTGTGTTATTCCCATGCATAGTAATCGATCGTGGTGGTGGC TGCACCTATTTACTGCAACGTATCATGTTGTTTCTTTGCCTGCCTGCGAG GGAGACCTTTGCCCACCAGTAGTATCAAATGTTTGTTTATTTCCTTCACG CGATCATTCTTTTTATCTAACAGATGACGAAGGCTGTCGAGGATGCGGTG AGAGAGTGTGATATGGGCCTCAACCCCAGCTCCGAGGGTCAGGGTCAGGT TCACGTTCCGATCCCGAAACCCACGAAGGAATCGAGAGAAGCCGTGGCAA AGATTGCTGCAAAGCACGCAGAGAAGGTGCGAGGTCGGGGCAGTGGCGGG GGTGAAAGCGTCTCTCGTGTGGGGCCGTGGTTCTCCCTCGTCGATCGGAT GTATACGCGTGAAAGGCGTTTTCGTAACCCTGCTTGTGTGTCGCTTTCCT CGTGTTTAAATTTGGTCAGGCGTTGGTTTACATCATAACGCCTCGGTACG CTCTAAACGGGCTCCATTGCGTTGCAGTCTCGTCGAGGGGGCGCAGAAAC GGCAGACCATCGAAGCATACGGCTTGCCATCCTCATTTCACGAGGGTTGA CGAGGCTTCCCACAACCTCCGCAGCTAATGCTCAAAAATGTAAGAAGTCG AGTTCCGCACGGCGACTTCTTTCGTTGCTTTTCCACATATTTTTCCTGGC TGGGGTCTCTATTCCCAAAAGTCGAAGGTCGTGCTGCGAGGCATCCGGCA CAAAATCCAGGATCAGATCAAGAAGAAGAAGGATTCATTTCCGGAGGATG AGGTGCACCAGAGGATGAAGGAGGTCGGTGGAATCGACTTTCGGCGCGGT TTCTAAAATCTCAATCGGTTTAGATATTGAGAAACGCCTCCTCGGTGGTG ACACCTCTGTCTGTGACCCGTATCTCGCGTCTACTCCTGTGATTTGGTAG AATCCTGCGCACATGCCTCGGGCTGACTCCGTTGTTGCCCCTTGCCCTCG TACGTCAATCCGGTTTCCGTCGTTCTGCGCTCATTCCACGGCAGGTCGAC AAATGCACGCAAGACGCCGAGGCTAACGCAGGCAAGATGTTGGAAAAAAA AAAGGCAGAGATCCTCACGGTCTAG
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Coding sequence (CDS) from alignment at H-elongata_contig82751:687..2711+

>mRNA_H-elongata_contig82751.15915.1 ID=mRNA_H-elongata_contig82751.15915.1|Name=mRNA_H-elongata_contig82751.15915.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1014bp|location=Sequence derived from alignment at H-elongata_contig82751:687..2711+ (Himanthalia elongata Himel1 dioecious)
TTGCAGGGACTCAAGCACGACTTCCAGGGATTGCGGGGGGGCAAGACAGA
TCCAGTTGCAGGGACTCAAGCACGACTTCCAGGGATTGCGGGGGGGCAAG
ACAGATCCAGCGATGCTGGACAGCGTTAGGGTTGAGTCTTACGGATCAAT
GTCAGCCCTGTCCACCGTGGCACAAGCATCCATGAAAGGGCCACAGCTCA
TCGTCCTCTCCGTTTACGACTCGGCGCGATGCTGGACAGCGTTAGGGTTG
AGTCTTACGGATCAATGTCAGCCCTGTCCACCGTGGCACAAGCATCCATG
AAAGGGCCACAGCTCATCGTCCTCTCCGTTTACGACTCGGCGATGACGAA
GGCTGTCGAGGATGCGGTGAGAGAGTGTGATATGGGCCTCAACCCCAGCT
CCGAGGGTCAGGGTCAGGTTCACGTTCCGATCCCGAAACCCACGAAGGAA
TCGAGAGAAGCCGTGGCAAAGATTGCTGCAAAGCACGCAGAGAAGATGAC
GAAGGCTGTCGAGGATGCGGTGAGAGAGTGTGATATGGGCCTCAACCCCA
GCTCCGAGGGTCAGGGTCAGGTTCACGTTCCGATCCCGAAACCCACGAAG
GAATCGAGAGAAGCCGTGGCAAAGATTGCTGCAAAGCACGCAGAGAAGTC
GAAGGTCGTGCTGCGAGGCATCCGGCACAAAATCCAGGATCAGATCAAGA
AGAAGAAGGATTCATTTCCGGAGGATGAGGTGCACCAGAGGATGAAGGAG
TCGAAGGTCGTGCTGCGAGGCATCCGGCACAAAATCCAGGATCAGATCAA
GAAGAAGAAGGATTCATTTCCGGAGGATGAGGTGCACCAGAGGATGAAGG
AGGTCGACAAATGCACGCAAGACGCCGAGGCTAACGCAGGCAAGATGTTG
GAAAAAAAAAAGGCAGAGATCCTCACGGTCTAGGTCGACAAATGCACGCA
AGACGCCGAGGCTAACGCAGGCAAGATGTTGGAAAAAAAAAAGGCAGAGA
TCCTCACGGTCTAG
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