prot_H-elongata_contig82512.15905.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82512.15905.1
Unique Nameprot_H-elongata_contig82512.15905.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
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BLAST of mRNA_H-elongata_contig82512.15905.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 9.300e-8
Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 DWGVLEMILPILQPFLHTQTLLEGRKYVTGSLVVPFIHDLRTNLE 50
            DW VL +I PIL+PF+  Q  LEG KYVTGS+ VP I +LR  LE
Sbjct:  269 DWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLE 313
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BLAST of mRNA_H-elongata_contig82512.15905.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 3.580e-5
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0 
Query:    6 DWGVLEMILPILQPFLHTQTLLEGRKYVTGSLVVPFIHDLRTNLE 50
            DW VL +I PIL+PF+  Q  LEG +YVTGS+ +  + +LR  LE
Sbjct:  233 DWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLE 277
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82512.15905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUY5_9PHAE9.300e-860.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS5_ECTSI3.580e-551.11Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82512contigH-elongata_contig82512:2338..2487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82512.15905.1mRNA_H-elongata_contig82512.15905.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82512 2314..2487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82512.15905.1 ID=prot_H-elongata_contig82512.15905.1|Name=mRNA_H-elongata_contig82512.15905.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MLMAADWGVLEMILPILQPFLHTQTLLEGRKYVTGSLVVPFIHDLRTNLE
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