prot_H-elongata_contig82027.15867.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82027.15867.1
Unique Nameprot_H-elongata_contig82027.15867.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length162
Homology
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BLAST of mRNA_H-elongata_contig82027.15867.1 vs. uniprot
Match: D8LCN2_ECTSI (Adenine nucleotide translocator 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN2_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.210e-22
Identity = 60/107 (56.07%), Postives = 72/107 (67.29%), Query Frame = 0 
Query:   57 DFSGDQSI-LRRLSLFVLVAGATAVALGYSHEHGMTEFHLFKSWTGDALPHPSPHATAGDDHGGLRVTPLDSMVTGLGAGFTRALSRTLTFPLDTLKTRRQVSRLRA 162
            D S D  + +R+LS+   +AG  AVA+ Y  EHGM  F   + W G A PH  PHA A D  G + +TPL S+ TGLGAGFTRA SRTLTFPLDT+KTR Q+SRL A
Sbjct:  103 DGSADLMVSMRQLSILGALAGVAAVAVDY--EHGMAGFLWIQDWAGGAAPHFPPHAAA-DGAGQVHLTPLRSVATGLGAGFTRAASRTLTFPLDTIKTRSQLSRLGA 206
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BLAST of mRNA_H-elongata_contig82027.15867.1 vs. uniprot
Match: A0A6H5JB89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB89_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 8.560e-22
Identity = 56/98 (57.14%), Postives = 68/98 (69.39%), Query Frame = 0 
Query:   65 LRRLSLFVLVAGATAVALGYSHEHGMTEFHLFKSWTGDALPHPSPHATAGDDHGGLRVTPLDSMVTGLGAGFTRALSRTLTFPLDTLKTRRQVSRLRA 162
            +R+LS+   +AG  AVA+GY  EHGM  F   + W G   PH  P  TA D  G + +TPL S+ TGLGAGFTRA+SRTLTFPLDT+KTR Q+SRL A
Sbjct:  204 MRQLSILGALAGVAAVAVGY--EHGMAGFLWIQDWAGVTAPHFPPR-TAADGAGQVHLTPLKSVATGLGAGFTRAVSRTLTFPLDTIKTRSQLSRLGA 298
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82027.15867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCN2_ECTSI1.210e-2256.07Adenine nucleotide translocator 3 n=1 Tax=Ectocarp... [more]
A0A6H5JB89_9PHAE8.560e-2257.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..63
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..84
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 125..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82027contigH-elongata_contig82027:893..2051 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82027.15867.1mRNA_H-elongata_contig82027.15867.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82027 893..2051 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82027.15867.1 ID=prot_H-elongata_contig82027.15867.1|Name=mRNA_H-elongata_contig82027.15867.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=162bp
MLLLLATSKEGLLEARNPLESPACTSNTTLGDAGEFEYTEAFAREDPREA
TAVGVADFSGDQSILRRLSLFVLVAGATAVALGYSHEHGMTEFHLFKSWT
GDALPHPSPHATAGDDHGGLRVTPLDSMVTGLGAGFTRALSRTLTFPLDT
LKTRRQVSRLRA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom_sf