mRNA_H-elongata_contig81839.15851.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig81839.15851.1
Unique NamemRNA_H-elongata_contig81839.15851.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig81839.15851.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 2.580e-74
Identity = 113/163 (69.33%), Postives = 127/163 (77.91%), Query Frame = 1
Query:    1 GEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSIMEVKIVVSTTHNGHLEFFLCDTDDLND-PDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAY 486
            GE A NGNY+E D ++ RHG+CGDPEQTA E SN+YG  NS YPVLETY EG I+EVKIVVST H GH+E FLCD DDL D PD  VTQ CFN HPLDRAEDD    PIDP   GR+ LDP CR++ETDQ ++ GAFPGDV TAR+QLP GVTC RC+VQMAY
Sbjct:   51 GERAENGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSKYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDVATARFQLPQGVTCERCVVQMAY 213          
BLAST of mRNA_H-elongata_contig81839.15851.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 2.390e-72
Identity = 112/163 (68.71%), Postives = 126/163 (77.30%), Query Frame = 1
Query:    1 GEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSIMEVKIVVSTTHNGHLEFFLCDTDDLND-PDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAY 486
            GE A NGNY+E D ++ RHG+CGDPEQTA E SN+YG  NS YPVLETY EG I+EVKIVVST H GH+E FLCD DDL D PD  VTQ CFN +PLDRAEDD    PIDP   GR+ LDP CR++ETDQ +L GAF GDV TAR+QLP GVTC RC+VQMAY
Sbjct:   80 GERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAY 242          
BLAST of mRNA_H-elongata_contig81839.15851.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 2.230e-69
Identity = 108/163 (66.26%), Postives = 126/163 (77.30%), Query Frame = 1
Query:    1 GEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSIMEVKIVVSTTHNGHLEFFLCDTDDL-NDPDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAY 486
            GE A NGNY+E + ++ RHGICGDPEQTA E SN+YG  NS YPVLETY EG I+E K+VVST H GH+E FLCD DDL   PD  VTQ CFN HPLDR +DD   SPIDP+  GR+ LDP CR++ETDQ +LDGAFPGDV TAR++LP G+TC RC+VQM Y
Sbjct:   82 GERAENGNYIESEEVAQRHGICGDPEQTAAEDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVY 244          
BLAST of mRNA_H-elongata_contig81839.15851.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 4.550e-69
Identity = 103/163 (63.19%), Postives = 124/163 (76.07%), Query Frame = 1
Query:    1 GEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSIMEVKIVVSTTHNGHLEFFLCDTDDL-NDPDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAY 486
            GE A NGNY+E + ++ RHGICGDPEQTA ESSN+YG  NS YPV ETY EG I+EVKIVVST H GH+E FLC+  +L   PD  VTQ CFN HPLDRA+DD    P DP+  GR+ LDP CR++ETDQ +LDGA+P DV TAR++LP G++C RC+VQM Y
Sbjct:   83 GERAENGNYIESEEVARRHGICGDPEQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVY 245          
BLAST of mRNA_H-elongata_contig81839.15851.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.070e-66
Identity = 114/232 (49.14%), Postives = 135/232 (58.19%), Query Frame = 1
Query:    4 EMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSIMEVKIVVSTTH-----------------------------------------------------------------------NGHLEFFLCDTDDLNDPDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAY 486
            E+  NGNY EP+ ISVRHGICGDPEQT  E +N YG  NS YPV   Y+EG I+E+KIVVST H                                                                       +GHLEFF+C+ +D++DPDG VTQGCFNMHPLDRA+DDGDASPIDP++ GRY+LDP CR+ ETDQ  L GA+PGDV TARY+LPSG+TCSRCI+QM Y
Sbjct:   78 EVHGNGNYYEPEEISVRHGICGDPEQTKAEGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWVRELPELSAQGFICGIAYLAFLVLVAAFAVVVFVFVVEEGEWKSAPTLYAHRAYEAVPGKYRALDYVHGGSGHLEFFICNAEDMSDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVY 309          
BLAST of mRNA_H-elongata_contig81839.15851.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 1.530e-66
Identity = 104/163 (63.80%), Postives = 121/163 (74.23%), Query Frame = 1
Query:    1 GEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSIMEVKIVVSTTHNGHLEFFLCDTDDLND-PDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAY 486
            G  A NGNYLE D ++ RHGICGDPEQTA E  N+YG  N  YPVL TY EG ++EVKI+VST H GH+E FLCDT DL +  D  VTQ CFN +PLDRA DD    PIDP Y GR+ LDP CR++ETDQ +++GA+PGDV TARYQLP GV C RC+VQM Y
Sbjct:   87 GARAANGNYLESDEVAQRHGICGDPEQTAAEGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVY 249          
BLAST of mRNA_H-elongata_contig81839.15851.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 1.920e-66
Identity = 106/163 (65.03%), Postives = 125/163 (76.69%), Query Frame = 1
Query:    1 GEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSIMEVKIVVSTTHNGHLEFFLCDTDDL-NDPDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAY 486
            G+ A NGNY+E + ++ RHGICGDPEQTA E SN YG  NS YPVLETY EG I+E K+VVST H GH+E FLCD +DL   PD  VTQ CFN HPLDR +DD   SPIDP+  GR+ LDP CR++ETDQ +LDGAFPGDV TAR++LP GV+C RC+VQM Y
Sbjct:   82 GDRAANGNYIESEEVAQRHGICGDPEQTAAEGSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDVATARFKLPEGVSCERCVVQMVY 244          
BLAST of mRNA_H-elongata_contig81839.15851.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 2.930e-64
Identity = 94/162 (58.02%), Postives = 118/162 (72.84%), Query Frame = 1
Query:    1 GEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSIMEVKIVVSTTHNGHLEFFLCDTDDLNDPDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAY 486
            GEMA NGNYLE D I+ RHGICGDPEQ  +E +N Y   N  +P+L TY EG ++E+K+ ++  H GH+EFF+C+ D++ DPDG   Q CFN +PL RAE D + SPIDPNYPGRY++DP CR  ETDQT  +GA  G V+ A YQLP G+TC RCI+QM Y
Sbjct:   59 GEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNY 220          
BLAST of mRNA_H-elongata_contig81839.15851.1 vs. uniprot
Match: D7FP25_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP25_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 1.130e-58
Identity = 100/162 (61.73%), Postives = 113/162 (69.75%), Query Frame = 1
Query:    4 EMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSIMEVKIVVSTTHNGHLEFFLCDTDDLND-PDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAY 486
            E   NGNY++ D             +TA E SNRYG  NS YPVLETY EG I+EVKIVV+T H GH+E FLCD DDL D PD  VTQ CFN +PLDRAEDD   SPIDP   GR+ LDP CR++ETDQ +L GAF GDV TAR+QLP GVTC RC+VQM Y
Sbjct:   45 EPGGNGNYIQSD-------------ETAAEGSNRYGQENSNYPVLETYAEGGILEVKIVVATYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNSPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMVY 193          
BLAST of mRNA_H-elongata_contig81839.15851.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 1.480e-58
Identity = 91/162 (56.17%), Postives = 117/162 (72.22%), Query Frame = 1
Query:    1 GEMATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEGSIMEVKIVVSTTHNGHLEFFLCDTDDLNDPDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAY 486
            GE A NGNYLE + I+ RHG+CGDPEQ ADE +N Y  AN  +  L+++T G ++E+ IV++  H GH EFF+C+TDD++DPDG  TQ CFNMHPL RA+DDGDASPIDPNYPGRY++DP CR  ET+Q+    +  G  +  RY LP  + C  CI+QM Y
Sbjct:   88 GEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQS--SNSIEGYNIKMRYVLPD-IECEHCILQMVY 246          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81839.15851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD35_9PHAE2.580e-7469.33CBM1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LD67_ECTSI2.390e-7268.71EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LM92_ECTSI2.230e-6966.26EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LM93_ECTSI4.550e-6963.19EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JI36_9PHAE1.070e-6649.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LMF4_ECTSI1.530e-6663.80EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM... [more]
A0A6H5KTY6_9PHAE1.920e-6665.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4D7_ECTSI2.930e-6458.02EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FP25_ECTSI1.130e-5861.73EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LMS9_ECTSI1.480e-5856.17EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LM... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81839contigH-elongata_contig81839:303..2726 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score252.3
Seed ortholog evalue1.5e-64
Seed eggNOG ortholog2880.D7FSZ8
EggNOG free text desc.Fungal-type cellulose-binding domain
EggNOG OGs2CZUJ@1,2SBQR@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size486
Cds size480
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81839.15851.1prot_H-elongata_contig81839.15851.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig81839 309..2726 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931226.2867687-UTR-H-elongata_contig81839:302..3081622931226.2867687-UTR-H-elongata_contig81839:302..308Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig81839 303..308 +
1691679749.768484-UTR-H-elongata_contig81839:302..3081691679749.768484-UTR-H-elongata_contig81839:302..308Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig81839 303..308 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931226.3156419-CDS-H-elongata_contig81839:308..3831622931226.3156419-CDS-H-elongata_contig81839:308..383Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81839 309..383 +
1691679749.7809083-CDS-H-elongata_contig81839:308..3831691679749.7809083-CDS-H-elongata_contig81839:308..383Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81839 309..383 +
1622931226.3324535-CDS-H-elongata_contig81839:840..9571622931226.3324535-CDS-H-elongata_contig81839:840..957Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81839 841..957 +
1691679749.7931988-CDS-H-elongata_contig81839:840..9571691679749.7931988-CDS-H-elongata_contig81839:840..957Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81839 841..957 +
1622931226.3554566-CDS-H-elongata_contig81839:2438..27261622931226.3554566-CDS-H-elongata_contig81839:2438..2726Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81839 2439..2726 +
1691679749.8068848-CDS-H-elongata_contig81839:2438..27261691679749.8068848-CDS-H-elongata_contig81839:2438..2726Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81839 2439..2726 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig81839.15851.1

>prot_H-elongata_contig81839.15851.1 ID=prot_H-elongata_contig81839.15851.1|Name=mRNA_H-elongata_contig81839.15851.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bp
MATNGNYLEPDSISVRHGICGDPEQTADESSNRYGNANSYYPVLETYTEG
SIMEVKIVVSTTHNGHLEFFLCDTDDLNDPDGAVTQGCFNMHPLDRAEDD
GDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVT
CSRCIVQMAY
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mRNA from alignment at H-elongata_contig81839:303..2726+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig81839.15851.1 ID=mRNA_H-elongata_contig81839.15851.1|Name=mRNA_H-elongata_contig81839.15851.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2424bp|location=Sequence derived from alignment at H-elongata_contig81839:303..2726+ (Himanthalia elongata Himel1 dioecious)
GGAGAGATGGCAACCAATGGCAATTATCTCGAGCCGGATTCGATTTCGGT TCGGCATGGAATTTGCGGAGATCCTGAACAGGTCAGTTATTGCTCCGTGT CGAAAGTAAGTTATTATAGCATAATCTCTATAGCAACCCTTTTGTTCCTA TCGGATGAACCGCACCAATAGTGAGCCGCTGTGACGGCTCGGATGTGTAG AGTATAATAAATAAAATGTTTAAGTCTATCCACCCTCTGGTGTCAAATTT GAAGACATTTCCACCTACGAATTGGATGTTAAATAAATGGTGTCAAGGAG CGAGCGTGTATTTTACTCCACTTGATCGAGAGCATCAGACAAACCACCCA CGAAGACCCGCTATGCCCACCATGGAGATAGATCAATCTCTAAATGAACT CGTATCGCATAGCGCGCACATAACAGTTGTGACGGATATTTTAAATGTGA GACGAGATATTGGACATGTTGCTGGTCCATCACCTCCAGATTGTTGCCAA CTCTCCTGCTTGTGCCCCTCACCGACTGCGGCGTACAGACAGCCGACGAG AGCTCCAACAGATACGGCAATGCGAACAGCTACTACCCTGTACTCGAGAC GTACACCGAGGGATCTATTATGGAGGTCAAGATCGTGGTGTCCACAACAC ACAATGTAGGTACTTGCAGGCTTCGCCTACACACGCAGCAATAAAGCTAT ATATTCCCATATCGTCAGTAACTTGTTGAGTTGACTTTTACCCTATCCAT GCGGAGCGCCTTTATCCATACGTAGAAGATACTACGTACAACCATTACAA TACATCCAGTTGATTGGTTCGACTTACACGTAATATGCCCTATGTATACA TACCCTGGAAGAGAGGGCGGAAGCTAAATATCCAATATCCGAACATCAGG TTCATAATATAGTATTGATTAACACATGCATGCTTATAGTCCTTTAGGTA TAGAGAAAATATTCTTGCCTTGCTGCAGAGTCAGTCCCAATCGTCAAACT CGACCAGTTTCGAATAACATGTCATCATAGGTCACCCCAGAGGATCGGTA GGTAACCTCAAACCTTCTGACGTTGGGACGTGAGCTCGAATCTTGGTGGA GTCACGCGAACTGGGATTTTCTCCCACATCATGCCCAACAAGTGGAGAAC GATTAATAATGGTAGGTACACAAAATTTGACTTCACAGTCGACGAGGGAA AGGGACCGCTGAATCATTATCACGTTAAAAGTAAAGGCAAGCACCGCAGA AGGAAGGTGGGGAAGTCTTGTGTGATCTTCCTCCTGTGTGACCCCGGCTG GTGCATCCACAAGTCTGACGTCCAGAAAAAATAGGATGACAGCATACTTA CAAATTATTCTCTGCCGATGGATGAGGCCGTTCAACATTCTCGGTTTCCT ACACATCACACTTACCCTTAGAAACGCCTTCTGGTCGTTCAACATTTCCC CGTTTTATTTATCGCGCTTCAAGTTTAGCACCCCTCCACCACGACAACAG CTGTTAAAATTCAATAAACACTCTCGCATTTTCCTTTAGAAAATATTTGC TTTGATTTTATCGTGTTGGTTGCTTCTGATGTTACTGCCCTTATTTCAAC TCTATGCAGATCTGGCCTATTCTCAAGCACACTACTAGTGGTTCTCTGAA CGGGAGTAAATCAGAAAATATATATATGTTGTATTAAACCATAAATATCA CGAAGTGTACCCATTGAAGTATCTTTCAGGAACGAATAACCATGACAGGC TAGGGGAAAAGTGTACAGGGAAAAAAGACACACACAGAACAGACAGTGGA ATGGTGTAAACAGTCGTAAACTGATTAAACCCCGCCCCAACATGGCTCTT CTTTCTCCTTAGAGAACCCTAACCGTATTAGCAACCGCGTATCGAAGTGG GTGTTGGTGGGACCCGATCAGTTAATTAATGCTACGATAATACACATACA TAAGCAATATTAACAGCTCGCTTTTGACGAGGGGTAGGGGTTGCGTTGAC TAATATAACTCTACAGTAGCACAAAAACATTCTACATCTTCATCATCCGC TTATAGCTTATCTAAACCCCAAGATAATCCCACCAGGCTAATCCACACTC GATGACCCGCGCCTATTTTCCCTGATCTTTCATTAGGGTCACTTAGAGTT CTTCCTGTGCGACACCGACGACCTGAACGATCCAGATGGTGCGGTGACCC AGGGGTGCTTTAACATGCACCCATTGGACCGAGCAGAAGACGACGGAGAC GCGTCGCCCATCGATCCCAATTATCCCGGAAGATACTTCCTTGACCCTAC CTGTAGGTCTACGGAAACGGACCAGACTATCCTTGATGGAGCCTTCCCTG GTGACGTGGTGACGGCTCGGTACCAGCTCCCTTCCGGTGTTACTTGCTCC CGCTGCATTGTGCAGATGGCCTAC
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Coding sequence (CDS) from alignment at H-elongata_contig81839:303..2726+

>mRNA_H-elongata_contig81839.15851.1 ID=mRNA_H-elongata_contig81839.15851.1|Name=mRNA_H-elongata_contig81839.15851.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=960bp|location=Sequence derived from alignment at H-elongata_contig81839:303..2726+ (Himanthalia elongata Himel1 dioecious)
ATGGCAACCAATGGCAATTATCTCGAGCCGGATTCGATTTCGGTTCGGCA
TGGAATTTGCGGAGATCCTGAACAGATGGCAACCAATGGCAATTATCTCG
AGCCGGATTCGATTTCGGTTCGGCATGGAATTTGCGGAGATCCTGAACAG
ACAGCCGACGAGAGCTCCAACAGATACGGCAATGCGAACAGCTACTACCC
TGTACTCGAGACGTACACCGAGGGATCTATTATGGAGGTCAAGATCGTGG
TGTCCACAACACACAATACAGCCGACGAGAGCTCCAACAGATACGGCAAT
GCGAACAGCTACTACCCTGTACTCGAGACGTACACCGAGGGATCTATTAT
GGAGGTCAAGATCGTGGTGTCCACAACACACAATGGTCACTTAGAGTTCT
TCCTGTGCGACACCGACGACCTGAACGATCCAGATGGTGCGGTGACCCAG
GGGTGCTTTAACATGCACCCATTGGACCGAGCAGAAGACGACGGAGACGC
GTCGCCCATCGATCCCAATTATCCCGGAAGATACTTCCTTGACCCTACCT
GTAGGTCTACGGAAACGGACCAGACTATCCTTGATGGAGCCTTCCCTGGT
GACGTGGTGACGGCTCGGTACCAGCTCCCTTCCGGTGTTACTTGCTCCCG
CTGCATTGTGCAGATGGCCTACGGTCACTTAGAGTTCTTCCTGTGCGACA
CCGACGACCTGAACGATCCAGATGGTGCGGTGACCCAGGGGTGCTTTAAC
ATGCACCCATTGGACCGAGCAGAAGACGACGGAGACGCGTCGCCCATCGA
TCCCAATTATCCCGGAAGATACTTCCTTGACCCTACCTGTAGGTCTACGG
AAACGGACCAGACTATCCTTGATGGAGCCTTCCCTGGTGACGTGGTGACG
GCTCGGTACCAGCTCCCTTCCGGTGTTACTTGCTCCCGCTGCATTGTGCA
GATGGCCTAC
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