prot_H-elongata_contig81451.15814.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81451.15814.1
Unique Nameprot_H-elongata_contig81451.15814.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length367
Homology
BLAST of mRNA_H-elongata_contig81451.15814.1 vs. uniprot
Match: D7FV60_ECTSI (Trinucleotide repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 3.860e-156
Identity = 256/378 (67.72%), Postives = 275/378 (72.75%), Query Frame = 0
Query:    1 NPLQVRPAEGQAEQENKLFVGMAPKSANEEEIRAVFASYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKR---PSASRAQSMIGSPGRHGGNLHPDAPGWMSHPPGA---AGYPYAMQGPPMSSSHVMGGIPAYNMPYAQGAAASGPXXXXQGSFLYYPYPTPGGYPPQ----GTYHSGPPSPNPRSIVGYGAGGHMHSPQGRDARHRQRPLYEGEDVGGGAISRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYNQSAHAEAAIAQMNGFQIGSKRLKVQHKRRGQNTEDPDDRAGDGAGG-FGETG--DYYSHPDYLGHHEA 365
            NPLQVRPAEGQAEQENKLFVGMAPKSANE+EIRAVFA YGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAI+ALHEQYTMQGGPRPLVVKFADNKR    +A R   +IGSPGRHG   HP+A GWM HP      AGYPY M GPPMS  H+M G+P Y M Y  G A   P    QGS++YYPY  PG YPPQ    G YHSGPPSP+                                       +RPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSY+  +HAEAAIAQMNGFQIGSKRLKVQHKRRGQ+T+DPD          +G+ G  DYY HPDY+GH + 
Sbjct:  116 NPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYPYPMPGPPMSP-HMMSGMP-YGMAYGGGQAPGAPA---QGSYVYYPYGAPG-YPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPDXXXXXXXXXXYGDQGQGDYYPHPDYMGHQDG 487          
BLAST of mRNA_H-elongata_contig81451.15814.1 vs. uniprot
Match: A0A7S1BYN5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYN5_9STRA)

HSP 1 Score: 260 bits (665), Expect = 5.630e-78
Identity = 166/358 (46.37%), Postives = 208/358 (58.10%), Query Frame = 0
Query:    2 PLQVRPAEGQ------AEQENKLFVGMAPKSANEEEIRAVFASYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRPSASRAQSM----IGSPGRHGGNLHPDAPGWMSHPPGAAGYPYAMQGPPMSSSHVMGGIPAYNMPYAQGAAASGPXXXXQGSFLYYPYPTPGGYP---------------------PQGTYHSGPPSPNPRSIVGYGAGGHMHSPQGRDARHRQRPLYEGEDVGGGAISRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYNQSAHAEAAIAQMNGFQIGSKRLKVQHKR 328
            P+Q+RPA G        EQENKLF+GM  ++A+E  IR VFAS+G +REI++IRN DG+NKGCAF+KY+ R SAL AI  L+ +  M G  RPL+VKFAD K    +R   M    +GSPGR     +P +P ++   P    Y  A + PP+   H     P     Y Q ++ +         F+Y P   P GYP                     P G   +  P PNP   V    G    SP+   A  +   +Y+    G    +RP EGPPGANLFIYHLP DL+DADLATAFAPFG+V+SAKVY+D+ +GESKGFGFVSY+    A+AAI QMNGFQIGSKRLKVQHKR
Sbjct:  199 PVQIRPAIGSNSTPTTPEQENKLFIGMTSRNADENAIREVFASFGEIREIYIIRNADGSNKGCAFLKYSQRDSALSAITMLNNKVVMDGASRPLIVKFADTKAQRRARGNGMSSRGLGSPGRGQSGHNPSSPYFIPPVPVYPNY-QAQRAPPIGIPHQYSQYPPQ---YGQSSSQN---------FMYVPT-GPYGYPSAPFNHNQMGNHSGGGSGAQQPGGAPSAFEPVPNPNHAVHPSRG----SPRTSPAPGK---VYQHRSDGPNTNTRPKEGPPGANLFIYHLPHDLTDADLATAFAPFGNVISAKVYVDKFTGESKGFGFVSYDVVTSADAAIEQMNGFQIGSKRLKVQHKR 535          
BLAST of mRNA_H-elongata_contig81451.15814.1 vs. uniprot
Match: A0A836CBS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS7_9STRA)

HSP 1 Score: 242 bits (617), Expect = 5.110e-72
Identity = 159/335 (47.46%), Postives = 192/335 (57.31%), Query Frame = 0
Query:    1 NPLQVRPAEGQAEQENKLFVGMAPKSANEEEIRAVFASYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRPSASRAQSMIGSPGRHGGNLHPDAPGWMSHPPGAAGYPY----AMQGPPMSS---SHVMGGIPAYNMPYAQGAAASGPXXXXQGSFLYYPYPTPGGYPPQGTYHSGPPSPNPRSIVGYGAGGHMHSPQGRDARHRQRPLYEGEDVGGGAISRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYNQSAHAEAAIAQMNGFQIGSKRLKVQHKR 328
            N LQVRPAEG  E++NKLFVGM PK+ANE+E+R VF+S+G LRE+H+IRN DG+NKGCAFVK+  R+ A+ AIDALHE+YT++G PRPLVVKFADN + +      M+  P   G +  P    + S P GA G       + QG PM S    +                     XX   G  + YP       PP G   S                     PQG         L           +RP EGP  +NLFIYHLP DL+DADLATAFA FG+V+SAKVY+DR + ESKGFGFVSY+    A AAI  MNGFQIG+KRLKVQHKR
Sbjct:  100 NALQVRPAEGHNERDNKLFVGMVPKAANEQELRKVFSSFGELREVHIIRNSDGSNKGCAFVKFMERECAVQAIDALHERYTLEGAPRPLVVKFADNNKRNV--VPRMLTGPIPGGTDSSP----YWSPPGGALGNLALAGGSQQGAPMYSYGGGYXXXXXXXXXXXXXXXXXXXXXXXGSSGQQMGYPP-----VPPAGP--SAXXXXXXXXXXXXXXXXXXXVPQGGGPSALVEELTP---------ARPQEGPAKSNLFIYHLPHDLTDADLATAFASFGNVISAKVYVDRVTNESKGFGFVSYDNPEAAAAAIVHMNGFQIGTKRLKVQHKR 412          
BLAST of mRNA_H-elongata_contig81451.15814.1 vs. uniprot
Match: A0A448YXA3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXA3_9STRA)

HSP 1 Score: 242 bits (617), Expect = 1.150e-70
Identity = 161/347 (46.40%), Postives = 198/347 (57.06%), Query Frame = 0
Query:    2 PLQVRPAEGQAEQENKLFVGMAPKSANEEEIRAVFASYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRP-------SASRAQSMIGSP-----GRHGGNLHPDAPGWMSHPPGAAGYPYAMQGPPMSSSHVMGGIPAYNMPYAQGAAASGPXXXXQGSFLYYPYPTPGGYPPQGTYHSGPPSPNP----RSIVGYGA-GGHMHS---PQGRDARHRQRPLYEGEDVGGGAISRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYNQSAHAEAAIAQMNGFQIGSKRLKVQHKR 328
            P QV+PAE    QENKLF+GM  + A E+E+R +FA +G +REI++IRN DGT+K  AF++Y  R +A++AI+ALH    M+G  RPL+VKFAD K         S  R +  IG P     G + G+  P  P  +  PP    Y   M  PP    H       Y  PY       GP    Q   +Y P     GYPP   Y    PSP+P        G G  GGH H    PQ      R  P +  +        RP EGP GANLF+YHLP DL+DADLATAF PFG+V+SAKVY+DR +G+SKGFGFVSY+    AE+AI QMNGFQIG+KRLKVQHKR
Sbjct:  255 PAQVKPAEPSV-QENKLFIGMLSRRAGEDEVRELFAPFGEIREIYMIRNGDGTSKCAAFLRYVGRDAAVNAIEALHNNLVMEGAARPLIVKFADTKHQRHVRQMRSVRRHEMFIGGPAGGYPGPYPGHHMPMGPPPVGGPPHQ--YAAHMGAPPHQMQH-------YGGPYP------GPGAGGQ---MYNPM----GYPPAPHY----PSPHPYGGFSERQGQGPDGGHQHQSTHPQRMKDGIRGNPRHHNQSTN----PRPREGPAGANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGDSKGFGFVSYDSVISAESAIEQMNGFQIGNKRLKVQHKR 570          
BLAST of mRNA_H-elongata_contig81451.15814.1 vs. uniprot
Match: A0A662WJB0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJB0_9STRA)

HSP 1 Score: 238 bits (607), Expect = 2.750e-70
Identity = 174/397 (43.83%), Postives = 213/397 (53.65%), Query Frame = 0
Query:    1 NPLQVRPAEGQA--EQENKLFVGMAPKSANEEEIRAVFASYGTLREIHVIRNQ-DGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRPSASRAQSMIGSPGRHGGNLHPDAPGWMSHPPGAAGYPYA----MQGPPMSSSHVMGGIPAYNM-PYAQG------AAASGPXXXXQGSFLYYPYPTPGGYPPQGTYHSGPPSPNPRSIVG---YGAGGHMHSPQGRDARHRQRPLYEGEDVGGGAISRPA---------EGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYNQSAHAEAAIAQMNGFQIGSKRLKVQHKRRGQNTEDPDDRAGD--GAGGFGETGDYYSHPDYLG----HHEA 365
            NPLQVRPAEGQA   QE+KLF+GM PK+A+E  IR VF  +GT+ E++++R+   G +KGCAF+K+  R SAL AID ++   TM  G  PLVVKFAD++R    RA+++  +           A  +   PPGA G P+     +Q   M      G   A  M P A G      AAA+GP      SF+YY                     NP    G   YG  G      G D +        G D     +   A         EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKVY+D+ +GESKGFGFVSY+ +  A+AAIA MNGFQIGSKRLKVQHKR  Q         GD  G GG G +G    H D L     HH+ 
Sbjct:  134 NPLQVRPAEGQAGASQEHKLFIGMIPKTADEAAIREVFELFGTIEEVYILRHPATGQSKGCAFLKFKDRNSALAAIDEVNGAVTMDRGTSPLVVKFADSRRQRLQRARNLAAAA----------ANTYWPMPPGA-GLPFPQLQQLQQQYMQQMQAFGAQTAAGMNPVAAGLSSPVGAAATGPGSPTN-SFMYY---------------------NPYGFAGAAPYGFNGLPSVGGGFDMQASLMGAAGGVDAQSQGVEAAAKASRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGSKRLKVQHKRIHQR--------GDYFGGGGVGSSGSLGGHEDELAGLEYHHQT 489          
BLAST of mRNA_H-elongata_contig81451.15814.1 vs. uniprot
Match: A0A485KNC1_9STRA (Aste57867_9466 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNC1_9STRA)

HSP 1 Score: 233 bits (594), Expect = 1.910e-69
Identity = 155/336 (46.13%), Postives = 192/336 (57.14%), Query Frame = 0
Query:    1 NPLQVRPAEGQA--EQENKLFVGMAPKSANEEEIRAVFASYGTLREIHVIRNQD-GTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRPSASRAQSMIGSPGRHGGNLHPDAPGWMSHPPGAAGYPYA----MQGPPMSSSHVMGGIPAYNMPYAQGAAASGPXXXXQGSFLYY-PYPTPGGYPPQGTYHSGPPSPNPRSIVGYGAGGHMHSPQGRDARHRQRPLYEGEDVGGGAISRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYNQSAHAEAAIAQMNGFQIGSKRLKVQHKR 328
            NPLQVRPAEGQA   QE+KLF+GM PK A+E +IRAVF S+G + EI+++R+   G +KGCAF+KY  R +A  AID ++   TM  G  PLVVKFAD++R    RA++   +           A  +   PPGAA  P+     +Q   M      G   A   P + G     P      +F+YY PY  PG YP             P + VG+       +     A      L               EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKVY+D+ +GESKGFGFVSY+ +  A+AAIA MNGFQIGSKRLKVQHKR
Sbjct:  105 NPLQVRPAEGQAGASQEHKLFIGMIPKHADEADIRAVFESHGEIEEIYILRHPGTGQSKGCAFLKYKDRHAASTAIDMINGVVTMDRGTAPLVVKFADSRRQRIQRARNQAAT----------SAAAYWQMPPGAA-IPFPQLQQIQQQYMQQMQAFGAQAAALNPSSNGVPPPAPANPA--AFMYYNPYGIPGAYPSF-----------PAAPVGFPLDPAAAAAASDSAARASSQL---------------EGPIGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKNTGESKGFGFVSYDSAQAADAAIASMNGFQIGSKRLKVQHKR 401          
BLAST of mRNA_H-elongata_contig81451.15814.1 vs. uniprot
Match: A0A024FWI3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FWI3_9STRA)

HSP 1 Score: 236 bits (601), Expect = 3.060e-69
Identity = 164/372 (44.09%), Postives = 210/372 (56.45%), Query Frame = 0
Query:    1 NPLQVRPAEGQA--EQENKLFVGMAPKSANEEEIRAVFASYGTLREIHVIRNQD-GTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRPSASRAQSMIGSPGRHGGNLHPDAPGWMSHPPGAAGYPYAMQGPPMSSSHVMGGIPAYNMP---YAQGAAASGPXXXXQGSFLYY-PYPTPGGYPP--QGTYHSGPPSPNPRSIVGYGAGGHMHSPQGRDARHRQRPLYEGEDV----GGGAISRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYNQSAHAEAAIAQMNGFQIGSKRLKVQHKR--RGQNTEDPDDRAGDGAGGFGETGDYYSHP 357
            NPLQVRPAEGQA   QE+KLF+GM PK+A E+ I  +F  +G + E+ ++R+Q  G +KGCAF+K+  R+SA+ AI+ L+ + TM  G  PLVVKFAD++R    R +S      + G    P  P    +     G    +        H M  + A+         G+   G       SF+YY PY   G  P    G+ +    +PNP      G  G      G DA      L  G D+    GG   +   EGPPGANLFIYHLP DL+DADLATAFAPFG V+SAKVY+D+ +GESKGFGFVSY+ S  A+ AIA MNGFQIGSKRLKVQHKR   GQ   +     GD   GF E+G+  ++P
Sbjct:  148 NPLQVRPAEGQAGAAQEHKLFIGMIPKTATEQAIYEIFGDFGPIDEVFILRHQPTGQSKGCAFLKFKERESAVAAIEQLNGKITMMNGVSPLVVKFADSRRQRLQRVRSTTSDTSQAGYWQMPHIPDGSIN-----GISLPVSQMQQMQQHYMQQVQAFGTQANGIGSGSVLPGSTSPTN-SFMYYNPYALSGAMPYGYNGSMYETMGAPNPAYSESIGHSGSSDVMTGADAAALTSSLA-GIDINANAGGTRSTTQLEGPPGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKLTGESKGFGFVSYDASEAADNAIASMNGFQIGSKRLKVQHKRIHSGQTQAN----YGDMNAGFAESGELSTYP 508          
BLAST of mRNA_H-elongata_contig81451.15814.1 vs. uniprot
Match: D8LNL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL8_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 4.740e-69
Identity = 166/381 (43.57%), Postives = 203/381 (53.28%), Query Frame = 0
Query:    1 NPLQVRPAEGQ--------------AEQENKLFVGMAPKSANEEEIRAVFASYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKR---------PSASRAQSMIGSPGR-HGGNLHPDAPGWMSHPPGAA-----------------GYPYAMQGPPMSSSHVMGGIPAYNMPYAQGAAASGPXXXXQGSFLYYPYPTPGGYPPQGTYHSGPPSPNPRSIVGYGAGGHMH---SPQGRDA---------RHRQRPLYEGEDVGGGAISRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYNQSAHAEAAIAQMNGFQIGSKRLKVQHKR 328
            NP+QVRPA+ Q               ++ENKLFVGM P  A++  +  VF+ +G + EI+ +RN DGT KGCAFVK++TR +A+ AI+ALHE+ TM G  R LVVKFAD K+         P  +R  S +G  GR HGG          +  PG                   GYPY +  P    S   G  P Y  P+  G   +       G ++ Y    P  YP Q      P S         GAG   H   SP G                     GE  GG   +RP EGPPGANLFIYHLP DL+DADLATAFAPFGHV+SAKV++D+ + ESKGFGFVSYN  A AE AI++MNGFQIGSKRLKVQHK+
Sbjct:   43 NPVQVRPADSQMGDDRLGPNGRVAPVDRENKLFVGMLPHDADDMTLTEVFSRFGEITEIYCMRNPDGTPKGCAFVKFSTRSAAIAAIEALHEKCTMDGATRALVVKFADVKKAQTAKGWMVPPDARGASPLGYNGRYHGGGTSVGGYWQATGAPGGRDVYSKGREVYPDYANHRGYPYQVGPPGGGYSQSYG--PEY--PHHPGQPQA-----RHGGYVAYSNLNPSHYPAQVDRSLSPSS---------GAGDRSHNFSSPPGGPVPGGIGXXXXXXXXXXXXRGEHGGG---ARPQEGPPGANLFIYHLPNDLTDADLATAFAPFGHVVSAKVFLDKRTQESKGFGFVSYNHPAEAEVAISKMNGFQIGSKRLKVQHKK 402          
BLAST of mRNA_H-elongata_contig81451.15814.1 vs. uniprot
Match: A0A0P1AE29_PLAHL (Cug-bp-and etr-3-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AE29_PLAHL)

HSP 1 Score: 233 bits (595), Expect = 5.690e-69
Identity = 161/340 (47.35%), Postives = 194/340 (57.06%), Query Frame = 0
Query:    1 NPLQVRPAEGQA--EQENKLFVGMAPKSANEEEIRAVFASYGTLREIHVIRNQD-GTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRPSASRAQSMIGSPGRHGGNLHPDAPGWMSHPPGAA-GYPYA--MQGPPMSSSHVMGGIPAYNMPYAQ-----GAAASGPXXXXQGSFLYY-PYPTPGGYPPQGTYHSGPPSPNPRSIVGYGAGGHMHSPQGRDARHRQRPLYEGEDVGGGAISRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYNQSAHAEAAIAQMNGFQIGSKRLKVQHKR 328
            NPLQVRPAEGQA   QE+KLF+GM PK+A+E  IR VF  YGT+ E++++R+   G +KGCAF+K+  R SAL AID ++   TM  G  PLVVKFAD++R    RA++M  +           A  +   PPGA   +P    +Q   M      G     N   A      G A  GP      SFLYY PY    G  P G Y           +   GA    +  Q       Q    E   V     +   EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKVY+D+ +GESKGFGFVSY+ S  A+AAIA MNGFQIGSKRLKVQHKR
Sbjct:  104 NPLQVRPAEGQAGASQEHKLFIGMIPKTADEGAIREVFELYGTIEEVYILRHPSTGLSKGCAFLKFKDRTSALAAIDDVNGNITMDRGTSPLVVKFADSRRQRLQRARNMAAA-----------ANAYWPLPPGAGLAFPQLQQLQQQYMQQMQAFGVQVGLNPAVAGLESPVGGAGGGPASPTN-SFLYYNPYGFAAG--PAGPYGF-------NGLPNVGAAISSYDMQSGGLVEMQGQAVEA--VKAARTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSSEAADAAIASMNGFQIGSKRLKVQHKR 420          
BLAST of mRNA_H-elongata_contig81451.15814.1 vs. uniprot
Match: A0A1E7FGE6_9STRA (RNA-binding domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGE6_9STRA)

HSP 1 Score: 234 bits (598), Expect = 1.540e-68
Identity = 157/353 (44.48%), Postives = 195/353 (55.24%), Query Frame = 0
Query:    2 PLQVRPAEGQAEQENKLFVGMAPKSANEEEIRAVFASYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRPSASRAQSMIG--------SPGRHGGNLHPDAPGWMSHPPGAAGYPYAMQGPPMSSSHVMGGIP-AYNMPYAQGAAASGPXXXXQGSFLYYP-YPTPGGYPPQGTYHSGPPSPNPRSIVGYGAGGHMHSPQG-RDARHRQRPLYEGEDVGG---------------GAISRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYNQSAHAEAAIAQMNGFQIGSKRLKVQHKR 328
            P QV+PAE     ENKLFVGM  + A E+EIR +FA +G +REI++IRN DG++K  AF++Y  R SA+ AI+ LH    ++G  RPL+VKFADNK     R    +          PG     ++P     M+  PGA  + Y    PP    H MGG P A+++P   GA   G         +Y P YP+P        ++ GPP P       YGAGG     Q  R   H                             A  RP EGP GANLF+YHLP DL+DADLATAF PFG+V+SAKVY+DR + ESKGFGFVSY+    AE+AI QMNGFQIG+KRLKVQHKR
Sbjct:  158 PAQVKPAEPSVP-ENKLFVGMLSRKAGEDEIRELFAPFGEIREIYMIRNADGSSKCAAFLRYIDRDSAIQAIEMLHNNLVLEGAARPLIVKFADNKHQRQQRHMRNVRRQELMTVMGPGVGYPGIYPGHHMAMAPLPGAPSHQY----PP---HHQMGGPPHAHHLPQYHGAPYPGGPGGGGPPAMYNPMYPSP-------QHYGGPPHP-------YGAGGFQDPNQNNRQGSHXXXXXXXXXXXXXXXXXXXXXXXXXPNQAANPRPREGPAGANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTDESKGFGFVSYDSVISAESAIEQMNGFQIGNKRLKVQHKR 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81451.15814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV60_ECTSI3.860e-15667.72Trinucleotide repeat containing 4, isoform CRA_d n... [more]
A0A7S1BYN5_9STRA5.630e-7846.37Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A836CBS7_9STRA5.110e-7247.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A448YXA3_9STRA1.150e-7046.40Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A662WJB0_9STRA2.750e-7043.83Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
A0A485KNC1_9STRA1.910e-6946.13Aste57867_9466 protein n=1 Tax=Aphanomyces stellat... [more]
A0A024FWI3_9STRA3.060e-6944.09Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
D8LNL8_ECTSI4.740e-6943.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0P1AE29_PLAHL5.690e-6947.35Cug-bp-and etr-3-like n=1 Tax=Plasmopara halstedii... [more]
A0A1E7FGE6_9STRA1.540e-6844.48RNA-binding domain-containing protein n=1 Tax=Frag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 252..325
e-value: 1.1E-22
score: 91.4
coord: 17..92
e-value: 4.5E-19
score: 79.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 18..81
e-value: 1.8E-14
score: 53.3
coord: 253..323
e-value: 1.1E-18
score: 66.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 251..329
score: 17.882
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 16..96
score: 16.347
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 5..103
e-value: 2.3E-25
score: 90.6
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 242..355
e-value: 1.6E-25
score: 91.7
NoneNo IPR availablePANTHERPTHR24012:SF771RNA-BINDING PROTEIN BRN2coord: 2..331
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 2..331
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 14..330

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81451contigH-elongata_contig81451:770..2121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81451.15814.1mRNA_H-elongata_contig81451.15814.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81451 770..2121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81451.15814.1 ID=prot_H-elongata_contig81451.15814.1|Name=mRNA_H-elongata_contig81451.15814.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=367bp
NPLQVRPAEGQAEQENKLFVGMAPKSANEEEIRAVFASYGTLREIHVIRN
QDGTNKGCAFVKYTTRQSALDAIDALHEQYTMQGGPRPLVVKFADNKRPS
ASRAQSMIGSPGRHGGNLHPDAPGWMSHPPGAAGYPYAMQGPPMSSSHVM
GGIPAYNMPYAQGAAASGPPPPPQGSFLYYPYPTPGGYPPQGTYHSGPPS
PNPRSIVGYGAGGHMHSPQGRDARHRQRPLYEGEDVGGGAISRPAEGPPG
ANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYN
QSAHAEAAIAQMNGFQIGSKRLKVQHKRRGQNTEDPDDRAGDGAGGFGET
GDYYSHPDYLGHHEAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf