prot_H-elongata_contig8138.15800.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8138.15800.1
Unique Nameprot_H-elongata_contig8138.15800.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length190
Homology
BLAST of mRNA_H-elongata_contig8138.15800.1 vs. uniprot
Match: A0A6H5K8D8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D8_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 2.260e-78
Identity = 109/153 (71.24%), Postives = 122/153 (79.74%), Query Frame = 0
Query:   38 SAVDGTECNTTLYSGWYDIPYSGGLLDDLNDFWRFSDAELTNGHALDAASSACKVMMKTLRLDRAGRNGPVADKYIYDVMCAKECVLSDSLREKAMLVTGCTCLQLSTQPSEAVYNSPGDWCTANSGRILCETFDHCGLWNCRISDFMCPRCE 190
            S  D   CN TLY  WYD PYSG LL+DL DFW F DAELTNG AL+  SS C+VMM TLRLDRAGRNGPV DKYIYDVMCA EC LSDS+RE+AM ++ CTCL+LSTQPS  +Y++ GDWC  NSGR+LCETF  CG+WNCRISDFMCPR E
Sbjct:   71 SVQDALTCNVTLYDQWYDSPYSGALLEDLVDFWIFPDAELTNGQALEVVSSTCRVMMDTLRLDRAGRNGPVQDKYIYDVMCANECTLSDSIREEAMELSSCTCLELSTQPSNPIYHTEGDWCVENSGRMLCETFGQCGVWNCRISDFMCPRYE 223          
BLAST of mRNA_H-elongata_contig8138.15800.1 vs. uniprot
Match: A0A835Z9M4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9M4_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.990e-52
Identity = 80/146 (54.79%), Postives = 100/146 (68.49%), Query Frame = 0
Query:   45 CNTTLYSGWYDIPYSGGLLDDLNDFWRFSDAELTNGHALDAASSACKVMMKTLRLDRAGRNGPVADKYIYDVMCAKECVLSDSLREKAMLVTGCTCLQLSTQPSEAVYNSPGDWCTANSGRILCETFDHCGLWNCRISDFMCPRCE 190
            C+  LY  WY+  Y G L +  N FW FS AEL+NG A++ A++ CK+ ++ LRLDRAGR+GPV + +I+DVMC+ ECV SD+LR  AM   GC CL LSTQ     Y + GDWC  NSGR+LC TF  CG W CR+ DFMCPR E
Sbjct:   36 CSLDLYQAWYNKAYEGPLQNTPN-FWIFSSAELSNGQAMEKAATKCKLKLEQLRLDRAGRHGPVEEWWIFDVMCSDECVQSDALRRAAMAACGCDCLALSTQAGAPSYRAAGDWCAHNSGRLLCATFYQCGTWACRVGDFMCPRFE 180          
BLAST of mRNA_H-elongata_contig8138.15800.1 vs. uniprot
Match: A0A482SVE4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVE4_9ARCH)

HSP 1 Score: 140 bits (353), Expect = 2.500e-38
Identity = 67/156 (42.95%), Postives = 95/156 (60.90%), Query Frame = 0
Query:   38 SAVDGTECNTTLYSGWYDIPYSGGLLDDLNDFWRFSDAE---LTNGHALDAASSACKVMMKTLRLDRAGRNGPVADKYIYDVMCAKECVLSDSLREKAMLVTGCTCLQLSTQPSEAVYNSPGDWCTANSGRILCETFDHCGLWNCRISDFMCPRCE 190
            S+++ T CN T Y  W +  Y G L  D + FW +       L N  A+  A   C+ M ++L L R+GR GP+  +  Y +MC   C+ +D+L E AM +TGC+CL+LSTQP +  +   GDWC+ N+ R+LC+   +CG+WNCRI DFMCPR E
Sbjct:   28 SSIEST-CNLTRYQQWLNERYIGFLASD-SAFWMYQTQPQIVLNNFFAMSLALRGCQRMFESLYLYRSGRMGPINIQDSYKIMCRDYCIENDNLHEIAMNITGCSCLELSTQPGDISFTKEGDWCSQNTARLLCDIVGYCGVWNCRIDDFMCPRYE 181          
BLAST of mRNA_H-elongata_contig8138.15800.1 vs. uniprot
Match: A0A0N7L7F1_PLAHL (FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L7F1_PLAHL)

HSP 1 Score: 82.4 bits (202), Expect = 5.460e-15
Identity = 44/132 (33.33%), Postives = 72/132 (54.55%), Query Frame = 0
Query:   59 SGGLLDDLNDFWRFSDAELTNGHALDAASSACKVMMKTLRLDRAGRNGPVADKYIYDVMCAKECVLSDSLREKAMLVTGCTCLQLSTQPSEAVYNSPGDWCTANSGRILCETFDHCGLWNCRISDFMCPRCE 190
            + GL  DL+ +  F +++  +GH +   ++ C+  +  L+  RAG  GP+  + +  VMC+ EC+ +D L + AML++ CTC ++S +          D+C  NS R+LC     CG W C + DF C R E
Sbjct:   49 ANGLQCDLDLYNAFIESK--DGHDIFIMAALCESRIVHLKHARAGWYGPIPQEDLAMVMCSDECLRNDELHKTAMLLSHCTCAEVSAETFVQ-----HDFCLENSARLLCTHLSECGHWGCELEDFNCLRYE 173          
BLAST of mRNA_H-elongata_contig8138.15800.1 vs. uniprot
Match: A0A7S4EDD8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDD8_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.310e-7
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 0
Query:  152 YNSPGDWCTANSGRILCETFDHCGLWNCRISDFMCPRCE 190
            Y + G+ C  NSGRI+C   D CG+W CR+ DFMCPR E
Sbjct:  198 YRTEGEVCQRNSGRIMCRVLDRCGVWACRLGDFMCPRHE 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8138.15800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K8D8_9PHAE2.260e-7871.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9M4_9STRA1.990e-5254.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482SVE4_9ARCH2.500e-3842.95Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A0N7L7F1_PLAHL5.460e-1533.33FKBP-type peptidyl-prolyl cis-trans isomerase n=1 ... [more]
A0A7S4EDD8_9STRA1.310e-756.41Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..190
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.766

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8138contigH-elongata_contig8138:6450..7158 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8138.15800.1mRNA_H-elongata_contig8138.15800.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8138 6450..7704 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8138.15800.1 ID=prot_H-elongata_contig8138.15800.1|Name=mRNA_H-elongata_contig8138.15800.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp
MGLSRRYLVMCFVLLMSRIDVVHSVNPTMLLVKSSDISAVDGTECNTTLY
SGWYDIPYSGGLLDDLNDFWRFSDAELTNGHALDAASSACKVMMKTLRLD
RAGRNGPVADKYIYDVMCAKECVLSDSLREKAMLVTGCTCLQLSTQPSEA
VYNSPGDWCTANSGRILCETFDHCGLWNCRISDFMCPRCE
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