prot_H-elongata_contig81342.15794.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81342.15794.1
Unique Nameprot_H-elongata_contig81342.15794.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length255
Homology
BLAST of mRNA_H-elongata_contig81342.15794.1 vs. uniprot
Match: D7G669_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G669_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 9.210e-78
Identity = 160/259 (61.78%), Postives = 176/259 (67.95%), Query Frame = 0
Query:    1 AQTPDSDFEGFEGEHRPPSSGGARSTADKELALLEHRLSGQVKGATMVVDEFLRVPGAKVFTVTKHKVTYHDVDATPPTGNASPEPETEVETTSAA-----AAPVDENGSIKDAAEALSEEGKEGNAKAEGEKVAAEAPSPAVASKKVRVRAVTELERTVFLTRERILVLACPGGPKSPGLVKSNRHLTELQKMTFMRRDPTLVTLHYFSSPAPGSVAAVGEGGEGGGGATKRNVYRFVPQDKETFIRIIRGALQRFQS 254
            ++ PDSDFEGF+GEH PP +GGAR+ ADKE+ALLEHRLSGQ+KGATMVVDEFL+VPGAKVFTVTKHKVT+HDVDATP                        A+  +E G   D     SE    GNA  E                K+RVRAVTELER VFL+RERILVLACP GP SPGLVKSN HLTELQKMTFMRRDP+LVTLHY    APG     G   +G  GATKRNVYRF   DKE FIRIIRGALQRFQ+
Sbjct: 1195 SENPDSDFEGFDGEHPPPRAGGARTAADKEVALLEHRLSGQIKGATMVVDEFLKVPGAKVFTVTKHKVTFHDVDATPEAXXXXXXXXXXXXXXXXXXXXXKASTAEEKGVAAD-----SEVETSGNADGEXXXXXXXXXXXXXXXXKMRVRAVTELERVVFLSRERILVLACPSGPTSPGLVKSNHHLTELQKMTFMRRDPSLVTLHYL---APG-----GPQEDGSPGATKRNVYRFGLDDKEAFIRIIRGALQRFQA 1440          
BLAST of mRNA_H-elongata_contig81342.15794.1 vs. uniprot
Match: A0A4D9DAX1_9STRA (Rhodanese domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAX1_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.480e-8
Identity = 47/108 (43.52%), Postives = 58/108 (53.70%), Query Frame = 0
Query:  149 TELERTVFLTRERILVLACPGGPK---SPGLVKSNRHLTELQKMTFMRRDPTLVTLHYFSSPAPGSVAAVGEGGEGGGGATKRNVYRFVPQDKETFIRIIRGALQRFQ 253
            TEL R + LT ERI+VL   G        G VKSN HLTEL +MTFM+R+P +VTL YF +P   +     E G       K   YR     KE FI  ++  LQRF+
Sbjct: 1537 TELARYIVLTPERIIVLEEAGRKARKAGQGRVKSNHHLTELARMTFMKREPDIVTL-YFRNPESQAGTEDTEAGPQKKENLKGRAYRIG--QKEDFIAALQLRLQRFK 1641          
BLAST of mRNA_H-elongata_contig81342.15794.1 vs. uniprot
Match: W7U2B4_9STRA (Tbc1 domain family member 23 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2B4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.140e-7
Identity = 46/107 (42.99%), Postives = 57/107 (53.27%), Query Frame = 0
Query:  150 ELERTVFLTRERILVLACPGGPK---SPGLVKSNRHLTELQKMTFMRRDPTLVTLHYFSSPAPGSVAAVGEGGEGGGGATKRNVYRFVPQDKETFIRIIRGALQRFQ 253
            EL R + LT ERI+VL   G        G VKSN HLTEL +MTFM+R+P +VTL YF +P   +     E G       K   YR     KE FI  ++  LQRF+
Sbjct: 1104 ELARYIVLTPERIIVLEEAGRKARKAGQGRVKSNHHLTELARMTFMKREPDIVTL-YFRNPECQAGTEDTEAGPQKKENLKGRAYRIG--QKEEFIAALQLRLQRFK 1207          
BLAST of mRNA_H-elongata_contig81342.15794.1 vs. uniprot
Match: A0A7S2CM97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CM97_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.360e-7
Identity = 38/118 (32.20%), Postives = 58/118 (49.15%), Query Frame = 0
Query:  144 RVRAVTELERTVFLTRERILVLAC--------PGGPKSPGLVKSNRHLTELQKMTFMRRDPTLVTLHYFSSPAPGSVAAVGEGGEGGGGATKRNVYRFVPQDKETFIRIIRGALQRFQ 253
            R+  +  L R + +T++R+LVL          P    S   VKSN HL+EL +MT +++DP +VTLHY   P+   +              +R  YR     K+ FI  ++  LQRF+
Sbjct:  122 RMSEIPSLPRIIIVTKDRLLVLQAIALDDGLPPPLLNSQATVKSNHHLSELSRMTLLKKDPDVVTLHYRDGPSEKDL--------------RRRTYRV--DCKDDFITTLQQCLQRFR 223          
BLAST of mRNA_H-elongata_contig81342.15794.1 vs. uniprot
Match: A0A7S2CN15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CN15_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.150e-6
Identity = 38/118 (32.20%), Postives = 58/118 (49.15%), Query Frame = 0
Query:  144 RVRAVTELERTVFLTRERILVLAC--------PGGPKSPGLVKSNRHLTELQKMTFMRRDPTLVTLHYFSSPAPGSVAAVGEGGEGGGGATKRNVYRFVPQDKETFIRIIRGALQRFQ 253
            R+  +  L R + +T++R+LVL          P    S   VKSN HL+EL +MT +++DP +VTLHY   P+   +              +R  YR     K+ FI  ++  LQRF+
Sbjct:  309 RMSEIPSLPRIIIVTKDRLLVLQAIALDDGLPPPLLNSQATVKSNHHLSELSRMTLLKKDPDVVTLHYRDGPSEKDL--------------RRRTYRV--DCKDDFITTLQQCLQRFR 410          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81342.15794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G669_ECTSI9.210e-7861.78Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
A0A4D9DAX1_9STRA1.480e-843.52Rhodanese domain-containing protein n=1 Tax=Nannoc... [more]
W7U2B4_9STRA1.140e-742.99Tbc1 domain family member 23 n=1 Tax=Nannochlorops... [more]
A0A7S2CM97_9STRA4.360e-732.20Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2CN15_9STRA1.150e-632.20Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81342contigH-elongata_contig81342:1347..2601 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81342.15794.1mRNA_H-elongata_contig81342.15794.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81342 1347..2601 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81342.15794.1 ID=prot_H-elongata_contig81342.15794.1|Name=mRNA_H-elongata_contig81342.15794.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=255bp
AQTPDSDFEGFEGEHRPPSSGGARSTADKELALLEHRLSGQVKGATMVVD
EFLRVPGAKVFTVTKHKVTYHDVDATPPTGNASPEPETEVETTSAAAAPV
DENGSIKDAAEALSEEGKEGNAKAEGEKVAAEAPSPAVASKKVRVRAVTE
LERTVFLTRERILVLACPGGPKSPGLVKSNRHLTELQKMTFMRRDPTLVT
LHYFSSPAPGSVAAVGEGGEGGGGATKRNVYRFVPQDKETFIRIIRGALQ
RFQS*
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