mRNA_H-elongata_contig81143.15770.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig81143.15770.1
Unique NamemRNA_H-elongata_contig81143.15770.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: D7G9H6_ECTSI (Mitochondrial Processing Peptidase beta subunit (C-terminal region) Mitochondrial Processing Peptida n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H6_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 1.100e-110
Identity = 153/183 (83.61%), Postives = 171/183 (93.44%), Query Frame = 1
Query:    1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAKRE 549
            +VILD LHEVCF +CGLGRTILGP EN+R ++++QL DYI THYTAPRMVVVGAGALEH++LV MAD+CFG LPR PPQG++VTPDPA+F+G DKRVL +KESEAYLALAF+GSSWTDEHAFPLM+MQTIMGGWDRSSGANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIA+ E
Sbjct:  218 EVILDNLHEVCFEKCGLGRTILGPAENIRSLSKQQLHDYITTHYTAPRMVVVGAGALEHEELVEMADRCFGNLPRDPPQGSIVTPDPAVFSGADKRVLNAKESEAYLALAFQGSSWTDEHAFPLMIMQTIMGGWDRSSGANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAQPE 400          
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: K8YV89_NANGC (Mitochondrial-processing peptidase subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YV89_NANGC)

HSP 1 Score: 236 bits (601), Expect = 9.290e-73
Identity = 115/185 (62.16%), Postives = 140/185 (75.68%), Query Frame = 1
Query:    1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGAN--VVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAKRE 549
            +VILDYLHE  F   GLGRTILGPEENV+ + R+ L+DYI THYTAPRMV+ GAGA+EH +LV +AD+ FG LPR  P GA    + A+F G DKRV + +ESEA++ALAF G++WT E AFPLMV+QTIMG WDRSSGA+  +   LGQA+    RE+CHSY TFNTCY D GLFG+YA+   E
Sbjct:  185 EVILDYLHETAFQGTGLGRTILGPEENVKSLHREALKDYIRTHYTAPRMVIAGAGAIEHGRLVELADKYFGNLPRQAPPGADTGMEAAVFVGSDKRVHSEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRSSGASRQMTGRLGQAVME--RELCHSYVTFNTCYKDMGLFGLYAVVPPE 367          
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: A0A7S3Q7A4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7A4_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.410e-64
Identity = 105/182 (57.69%), Postives = 131/182 (71.98%), Query Frame = 1
Query:    1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSG--ANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIA 540
            +++LD+LH   F   GLGRTILGPE+N+R +TR  L +YI THYTAPRMV+ GAGA++H QL  MAD  FG LP  P  G     DPA+FTG D RV    ++ A+LALAFEG+SWT E+AFPLM+MQT++G +DR+SG   NV   + Q +A    E+ HS TTFNTCY DTGLFGIYA+A
Sbjct:  178 ELVLDHLHATAFQGTGLGRTILGPEDNIRSLTRDDLAEYIHTHYTAPRMVIAGAGAIDHAQLCEMADANFGSLPSAPKAGLESAMDPAVFTGSDIRVKFDSDNNAHLALAFEGASWTSEYAFPLMLMQTMLGSYDRASGFGKNVASKMCQEVAE--HELAHSITTFNTCYKDTGLFGIYAVA 357          
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: A0A6S8R8K4_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6S8R8K4_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.450e-63
Identity = 99/182 (54.40%), Postives = 132/182 (72.53%), Query Frame = 1
Query:    1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGA--NVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIA 540
            +++LD+LH   F   GLGRTILGPEEN+R + +  L  YI THYTAPRMV+ GAGA++H++L G+A + FG LP  P  G  V  DPA+FTG D R+    ++ A++ALAF+G+SWT E+AFPLM+MQT++G +DR+SG   NV   + Q +A    E+ HS +TFNTCY DTGLFGIYA+A
Sbjct:  205 ELVLDHLHATAFQGTGLGRTILGPEENIRSLAKSDLSGYINTHYTAPRMVIAGAGAIDHEELCGLAGEHFGSLPTAPKDGVEVAMDPAVFTGSDVRIRFDSDNTAHVALAFQGASWTSEYAFPLMIMQTMLGSYDRASGLGKNVASKMCQEVAE--HELAHSISTFNTCYKDTGLFGIYAVA 384          
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: A0A7S2V5V4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5V4_9STRA)

HSP 1 Score: 211 bits (538), Expect = 2.580e-63
Identity = 105/194 (54.12%), Postives = 128/194 (65.98%), Query Frame = 1
Query:    1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLP--------RYPPQGAVVTPDPAIFTGGDKRVLTS---KESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAKRE 549
            +VILDYLHEV ++  GLGRTILGPEENVR ++R+ L  YI THYTAPRMVV GAGALEH +LV MA+  F  LP         Y     ++  DPA+FTG  K V      KE   ++ALAFEG+SWT E AFPLM++QTIMG WDR+ G            ++ +E+CHSYTTFNTCY DTGL G+Y +   E
Sbjct:  175 EVILDYLHEVAYNGTGLGRTILGPEENVRGLSREDLLGYIQTHYTAPRMVVAGAGALEHQELVDMAEHFFSGLPTAADQQNSHYASTDLLILDDPAVFTGSHKLVPGGDGVKEENTHIALAFEGASWTSEWAFPLMILQTIMGSWDRTCGVGKAGDSQFLKRLAHKELCHSYTTFNTCYKDTGLIGLYCVVPHE 368          
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: A0A7S1D561_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D561_CYCTE)

HSP 1 Score: 211 bits (536), Expect = 5.370e-63
Identity = 98/182 (53.85%), Postives = 131/182 (71.98%), Query Frame = 1
Query:    1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSS--GANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIA 540
            +++LD+LH   F   GLGRTILGPEEN+R +T+  L DYI THYTAPRMV+ GAGA+ H++L G+ADQ FG+LP  P  G  V  DPA+FTG D RV       A++A+AFEG++WT E+AFPLM+MQ+I+G +DR++  G N+   + Q +A       HS +TFNTCY DTGLFG+YA++
Sbjct:  187 ELVLDHLHGTAFQGTGLGRTILGPEENIRSLTKNDLLDYISTHYTAPRMVIAGAGAINHEELCGLADQHFGKLPTVPAGGVEVAMDPAVFTGSDIRVKFDSHDTAHVAIAFEGAAWTSEYAFPLMLMQSILGSYDRTAPIGKNIASRMCQEIATEGS--AHSVSTFNTCYKDTGLFGVYAVS 366          
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: F0W4S6_9STRA (Mitochondrialprocessing peptidase subunit beta puta n=2 Tax=Albugo TaxID=65356 RepID=F0W4S6_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.140e-61
Identity = 98/182 (53.85%), Postives = 131/182 (71.98%), Query Frame = 1
Query:    1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGA--NVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIA 540
            +V+ D LHE  +   GLGRTILGP+EN+R +T++ L+DYI THYTA RMV+ GAGA++H +LV +A++ FG LP        +T DPA F G D RV    E+  ++ALAFEG SWT E+AFPL++MQT++G WDR+ GA  N    LGQA+A    E+ HS++ FNTCY+DTGLFG+YA+A
Sbjct:  172 EVVFDRLHETAYMGNGLGRTILGPQENIRSLTKQDLRDYIATHYTADRMVIAGAGAIDHQELVQLAEKSFGNLPTTASNYQAITLDPARFIGSDIRVPNDSEALVHVALAFEGFSWTSEYAFPLLIMQTLIGSWDRTDGAGLNSSSKLGQAVAE--HELVHSFSAFNTCYHDTGLFGVYAVA 351          
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: A0A7S3XSD1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSD1_HETAK)

HSP 1 Score: 206 bits (524), Expect = 3.730e-61
Identity = 99/183 (54.10%), Postives = 126/183 (68.85%), Query Frame = 1
Query:    1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAKRE 549
            +V+LD+LH   F   GLGRTILGPEEN+R + R  L+ +I THYTA R VV GAGAL H + V +A + FG LP  P + A    +PA+F G + RV+   + EA++ALAFEG+SWT E AFPLM +Q ++GGWDR+SGA    P   A  ++   + HSYTTFNTCY DTGLFG+YAIA  E
Sbjct:  192 EVLLDHLHAAAFGMQGLGRTILGPEENIRALQRSDLEGFIKTHYTADRFVVAGAGALSHQETVELAQKFFGHLP--PAEKAPPGAEPAVFRGAENRVVDMSQDEAHVALAFEGASWTSEWAFPLMCLQALLGGWDRASGAGAATPSPLAQRVAGLGLAHSYTTFNTCYQDTGLFGVYAIAPPE 372          
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: K3WG69_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WG69_GLOUD)

HSP 1 Score: 205 bits (522), Expect = 4.510e-61
Identity = 100/184 (54.35%), Postives = 128/184 (69.57%), Query Frame = 1
Query:    1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGA--NVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAKR 546
            +VI D LHE  F   GLGRTILGP EN+R + +  L+DYI THYTAPRMVV GAGA++H QLV +A   FG LP  P      T +P  F G D R+   ++  A++A+AFEG SWT EHAFPL++MQT++G WDR+SGA  N+   LGQ +A   +E+ HS+  FNTCY DTGLFG+YA+A +
Sbjct:  173 EVIFDRLHETAFMGNGLGRTILGPIENIRNLKKADLEDYIATHYTAPRMVVAGAGAVDHSQLVDLAKNAFGGLPTEPK--VAPTLEPVRFVGSDVRIKDDEQPLAHMAIAFEGFSWTSEHAFPLLIMQTLLGSWDRTSGAGINMSSKLGQVVAE--KELAHSFMAFNTCYQDTGLFGVYAVADQ 352          
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: M4BT98_HYAAE (Uncharacterized protein n=28 Tax=Peronosporaceae TaxID=4777 RepID=M4BT98_HYAAE)

HSP 1 Score: 204 bits (520), Expect = 1.670e-60
Identity = 100/184 (54.35%), Postives = 127/184 (69.02%), Query Frame = 1
Query:    1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGA--NVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAKR 546
            +V+ D LHE  F   GLGRTILGP EN+R + +  LQDYI THYTAPRMV+ GAGA++H QLV +A + FG LP  P      T +   F G D RV       A++ALAFEG SWT EH+FPL++MQT++G WDR+SGA  N+   LGQ +A   +E+ HSY +FNTCY DTGLFG+YA+A +
Sbjct:  201 EVVFDRLHETAFMGNGLGRTILGPTENIRNLKKSDLQDYIATHYTAPRMVIAGAGAVDHSQLVELAQKSFGELPTTP--AVAPTLELVRFVGSDVRVKDDSMPLAHVALAFEGFSWTSEHSFPLLIMQTLLGSWDRTSGAGMNMSSKLGQVVAE--KELAHSYMSFNTCYQDTGLFGVYAVADK 380          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9H6_ECTSI1.100e-11083.61Mitochondrial Processing Peptidase beta subunit (C... [more]
K8YV89_NANGC9.290e-7362.16Mitochondrial-processing peptidase subunit beta n=... [more]
A0A7S3Q7A4_9STRA1.410e-6457.69Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6S8R8K4_9STRA1.450e-6354.40Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID... [more]
A0A7S2V5V4_9STRA2.580e-6354.12Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1D561_CYCTE5.370e-6353.85Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
F0W4S6_9STRA1.140e-6153.85Mitochondrialprocessing peptidase subunit beta put... [more]
A0A7S3XSD1_HETAK3.730e-6154.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3WG69_GLOUD4.510e-6154.35Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
M4BT98_HYAAE1.670e-6054.35Uncharacterized protein n=28 Tax=Peronosporaceae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81143contigH-elongata_contig81143:162..2269 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score210.3
Seed ortholog evalue7.6e-52
Seed eggNOG ortholog67593.Physo108442
Preferred nameMAS1
KEGG koko:K17732
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005746,GO:0005750,GO:0005758,GO:0005759,GO:0005773,GO:0005774,GO:0006091,GO:0006119,GO:0006122,GO:0006139,GO:0006163,GO:0006508,GO:0006605,GO:0006626,GO:0006627,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009507,GO:0009536,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016485,GO:0016787,GO:0017087,GO:0017144,GO:0019538,GO:0019637,GO:0019693,GO:0019866,GO:0019867,GO:0022900,GO:0022904,GO:0030312,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034982,GO:0042773,GO:0042775,GO:0042886,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044437,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045184,GO:0045275,GO:0045333,GO:0046034,GO:0046483,GO:0046872,GO:0046907,GO:0046914,GO:0051179,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0055086,GO:0055114,GO:0070011,GO:0070013,GO:0070069,GO:0070469,GO:0070585,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072521,GO:0072594,GO:0072655,GO:0098588,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0098805,GO:0140096,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204
EggNOG free text desc.Insulinase (Peptidase family M16)
EggNOG OGs3QA0P@4776,COG0612@1,KOG0960@2759
EC3.4.24.64
COG Functional cat.O
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03029
Hectar predicted targeting categoryother localisation
Exons3
Model size549
Cds size549
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81143.15770.1prot_H-elongata_contig81143.15770.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig81143 162..2269 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931218.2032757-CDS-H-elongata_contig81143:161..4131622931218.2032757-CDS-H-elongata_contig81143:161..413Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81143 162..413 +
1691679746.3291678-CDS-H-elongata_contig81143:161..4131691679746.3291678-CDS-H-elongata_contig81143:161..413Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81143 162..413 +
1622931218.220887-CDS-H-elongata_contig81143:1244..14071622931218.220887-CDS-H-elongata_contig81143:1244..1407Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81143 1245..1407 +
1691679746.3486178-CDS-H-elongata_contig81143:1244..14071691679746.3486178-CDS-H-elongata_contig81143:1244..1407Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81143 1245..1407 +
1622931218.2334855-CDS-H-elongata_contig81143:2135..22691622931218.2334855-CDS-H-elongata_contig81143:2135..2269Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81143 2136..2269 +
1691679746.358621-CDS-H-elongata_contig81143:2135..22691691679746.358621-CDS-H-elongata_contig81143:2135..2269Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81143 2136..2269 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig81143.15770.1

>prot_H-elongata_contig81143.15770.1 ID=prot_H-elongata_contig81143.15770.1|Name=mRNA_H-elongata_contig81143.15770.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp
QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMV
VVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTS
KESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGANVVPPLGQAL
AMSPREICHSYTTFNTCYNDTGLFGIYAIAKRE
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mRNA from alignment at H-elongata_contig81143:162..2269+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig81143.15770.1 ID=mRNA_H-elongata_contig81143.15770.1|Name=mRNA_H-elongata_contig81143.15770.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2108bp|location=Sequence derived from alignment at H-elongata_contig81143:162..2269+ (Himanthalia elongata Himel1 dioecious)
CAGGTAATCCTAGACTATCTACACGAGGTATGCTTCCACGAGTGCGGCCT TGGGCGCACGATTCTCGGACCCGAGGAAAACGTCCGGAAGATAACCCGCA AACAACTTCAGGACTACATCCTGACCCACTACACCGCACCGCGCATGGTC GTGGTTGGGGCCGGTGCCCTGGAGCACGACCAGTTGGTGGGGATGGCGGA TCAGTGCTTCGGGAGACTTCCTCGCTACCCGCCACAGGGAGCTGTCGTCA CGGTGAGAGAAATAAGATCGCACAGGAGGTACGGAGGTGTGGTTCGTTTT AGGGTACAGGGGGAAGGAAACGAAAAGCGCTAAGCGTTCGAGAGAAGGTG TATTTTTTGGGGAGTCTAGCTTCATATTTTCCGGCGACGCGCGCGATTTC TGTCTTTGTCTTTTTCCTTCCTCCCAAAAATACTCTTTTTTTTTTTTTTT TTTTTTTTTTTTTATATTTTTTTTTGTGGTTTTTGTTTATTTTTTTTCTT TTTTTTGTNNNNNNNNNNTTTGTTGGTGGGGTAAGAAGGAAACCAAAAAA TACTCTTTTTTTTTTTTTTTTTTTTCGAAAATGAAACGGGATTTAGAGGG GTAGGAGAATGATTTTGCTCTCTGAAGAGTCTCGAGAGCCGTGCAGATCC TACGGCTAGGGACTGTGCCGTATCCGGCGAAGTGTAGAGGAATCTCGCTC CCAAGAGACTTAGTCGGATTCTGCGTGTGGTAATCTCGCGAAGTAATCAT CCTGGAAACCTTTTTAGCATGTACGGCTCGGGGAAGGATTATTTCATATA TCATTCTTATCCAGTTGCATTAAGTGTCGTAATTCGCGGATGCTCGTAGC GGGGAAGATGGCTATACTGACCCCGCCTCAGGTGAAGGTGTGGTGCTAGA GGGCTTCCGTATGAAGGTCTTCCAAGGGACGTGTTCTCCACGCAGCACGA CCAGAAAAAAATAGTGGCGGGCCTGAAAGCTTAAAAATCCTCAAATGTAT GTATCTCTTTCTCTCTCTCTGCTTCCGTCCCCTGATCCCGCGTTCTTGAC AAAATGAACGCCTTCTGGCGTCGAAATCAAAAGCCTGATCCTGCGATCTT TACCGGCGGGGACAAGCGGGTGCTCACGTCGAAGGAATCCGAGGCGTACC TGGCGCTAGCTTTCGAGGGATCGTCGTGGACAGATGAGCACGCTTTCCCC CTGATGGTGATGCAAACCATCATGGGAGGCTGGGATCGCAGCAGCGGTGC GTGTCTGACTGAACTTTCTGTGTTCTCCTGCTATTGGGCTCATAGTGTAA ATTAGTCTACCCGCTTGTCTTCGAGTGGTGAGGCCACGGGATCGGCTGGT TGCTTTCGGCTCTTTCTATCTCTCGTAAGTTGTACGATTAATAACCCTTA TTATCACTATTATTATGACATTATTATTATATTATTATTTTTATTTAAAA GTTATTATTGTTATTATTATTATTATTATTATGACATTATTATTTATTAT TGTTGTTATTGCTATTATTATTATTATTATGACATTATTATTATATTATT ATTGTTATTATTATTATTATTGTTATTATTATTATTATTGTTATTATTAT TATTATTATTATTGTTTTTGTTATTGCTATTTCTACTATTATTATTATTA TTATTGTTGTTATTATTATTATTGCTACTATTACTATTATTATGACATTA TTATTATATTATTAGTTTTATTATTACTGTTACGAATATTAATAATACTA TTACTATTCTTAATGTAATTATTATGACATTATTTTTGTTATTATTGTTA TTATTGTTATTGCTACTATTATTATTATTATTATTATTATTATTATGACA TTATTATAATATTATTAGTGTTATTGCTATTATTAGTATTGTTATTATTA CTGTTACGAATATTATTAATACTATTACTATTATTATTTATGTTATTATT TTTTATTTCCCTGGTTCGCGGCAGGTGCCAACGTAGTCCCTCCGCTGGGG CAAGCCCTTGCCATGTCCCCGAGGGAAATCTGCCACTCGTACACGACGTT CAACACGTGCTACAACGATACGGGTCTCTTCGGCATATACGCCATCGCCA AACGTGAG
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Coding sequence (CDS) from alignment at H-elongata_contig81143:162..2269+

>mRNA_H-elongata_contig81143.15770.1 ID=mRNA_H-elongata_contig81143.15770.1|Name=mRNA_H-elongata_contig81143.15770.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at H-elongata_contig81143:162..2269+ (Himanthalia elongata Himel1 dioecious)
CAGGTAATCCTAGACTATCTACACGAGGTATGCTTCCACGAGTGCGGCCT
TGGGCGCACGATTCTCGGACCCGAGGAAAACGTCCGGAAGATAACCCGCA
AACAACTTCAGGACTACATCCTGACCCACTACACCGCACCGCGCATGGTC
GTGGTTGGGGCCGGTGCCCTGGAGCACGACCAGTTGGTGGGGATGGCGGA
TCAGTGCTTCGGGAGACTTCCTCGCTACCCGCCACAGGGAGCTGTCGTCA
CGCAGGTAATCCTAGACTATCTACACGAGGTATGCTTCCACGAGTGCGGC
CTTGGGCGCACGATTCTCGGACCCGAGGAAAACGTCCGGAAGATAACCCG
CAAACAACTTCAGGACTACATCCTGACCCACTACACCGCACCGCGCATGG
TCGTGGTTGGGGCCGGTGCCCTGGAGCACGACCAGTTGGTGGGGATGGCG
GATCAGTGCTTCGGGAGACTTCCTCGCTACCCGCCACAGGGAGCTGTCGT
CACGCCTGATCCTGCGATCTTTACCGGCGGGGACAAGCGGGTGCTCACGT
CGAAGGAATCCGAGGCGTACCTGGCGCTAGCTTTCGAGGGATCGTCGTGG
ACAGATGAGCACGCTTTCCCCCTGATGGTGATGCAAACCATCATGGGAGG
CTGGGATCGCAGCAGCGCCTGATCCTGCGATCTTTACCGGCGGGGACAAG
CGGGTGCTCACGTCGAAGGAATCCGAGGCGTACCTGGCGCTAGCTTTCGA
GGGATCGTCGTGGACAGATGAGCACGCTTTCCCCCTGATGGTGATGCAAA
CCATCATGGGAGGCTGGGATCGCAGCAGCGGTGCCAACGTAGTCCCTCCG
CTGGGGCAAGCCCTTGCCATGTCCCCGAGGGAAATCTGCCACTCGTACAC
GACGTTCAACACGTGCTACAACGATACGGGTCTCTTCGGCATATACGCCA
TCGCCAAACGTGAGGTGCCAACGTAGTCCCTCCGCTGGGGCAAGCCCTTG
CCATGTCCCCGAGGGAAATCTGCCACTCGTACACGACGTTCAACACGTGC
TACAACGATACGGGTCTCTTCGGCATATACGCCATCGCCAAACGTGAG
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