mRNA_H-elongata_contig81143.15770.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: D7G9H6_ECTSI (Mitochondrial Processing Peptidase beta subunit (C-terminal region) Mitochondrial Processing Peptida n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H6_ECTSI) HSP 1 Score: 334 bits (856), Expect = 1.100e-110 Identity = 153/183 (83.61%), Postives = 171/183 (93.44%), Query Frame = 1
Query: 1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAKRE 549
+VILD LHEVCF +CGLGRTILGP EN+R ++++QL DYI THYTAPRMVVVGAGALEH++LV MAD+CFG LPR PPQG++VTPDPA+F+G DKRVL +KESEAYLALAF+GSSWTDEHAFPLM+MQTIMGGWDRSSGANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIA+ E
Sbjct: 218 EVILDNLHEVCFEKCGLGRTILGPAENIRSLSKQQLHDYITTHYTAPRMVVVGAGALEHEELVEMADRCFGNLPRDPPQGSIVTPDPAVFSGADKRVLNAKESEAYLALAFQGSSWTDEHAFPLMIMQTIMGGWDRSSGANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAQPE 400
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: K8YV89_NANGC (Mitochondrial-processing peptidase subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YV89_NANGC) HSP 1 Score: 236 bits (601), Expect = 9.290e-73 Identity = 115/185 (62.16%), Postives = 140/185 (75.68%), Query Frame = 1
Query: 1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGAN--VVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAKRE 549
+VILDYLHE F GLGRTILGPEENV+ + R+ L+DYI THYTAPRMV+ GAGA+EH +LV +AD+ FG LPR P GA + A+F G DKRV + +ESEA++ALAF G++WT E AFPLMV+QTIMG WDRSSGA+ + LGQA+ RE+CHSY TFNTCY D GLFG+YA+ E
Sbjct: 185 EVILDYLHETAFQGTGLGRTILGPEENVKSLHREALKDYIRTHYTAPRMVIAGAGAIEHGRLVELADKYFGNLPRQAPPGADTGMEAAVFVGSDKRVHSEEESEAHVALAFRGAAWTSEFAFPLMVLQTIMGCWDRSSGASRQMTGRLGQAVME--RELCHSYVTFNTCYKDMGLFGLYAVVPPE 367
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: A0A7S3Q7A4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7A4_9STRA) HSP 1 Score: 214 bits (546), Expect = 1.410e-64 Identity = 105/182 (57.69%), Postives = 131/182 (71.98%), Query Frame = 1
Query: 1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSG--ANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIA 540
+++LD+LH F GLGRTILGPE+N+R +TR L +YI THYTAPRMV+ GAGA++H QL MAD FG LP P G DPA+FTG D RV ++ A+LALAFEG+SWT E+AFPLM+MQT++G +DR+SG NV + Q +A E+ HS TTFNTCY DTGLFGIYA+A
Sbjct: 178 ELVLDHLHATAFQGTGLGRTILGPEDNIRSLTRDDLAEYIHTHYTAPRMVIAGAGAIDHAQLCEMADANFGSLPSAPKAGLESAMDPAVFTGSDIRVKFDSDNNAHLALAFEGASWTSEYAFPLMLMQTMLGSYDRASGFGKNVASKMCQEVAE--HELAHSITTFNTCYKDTGLFGIYAVA 357
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: A0A6S8R8K4_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6S8R8K4_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.450e-63 Identity = 99/182 (54.40%), Postives = 132/182 (72.53%), Query Frame = 1
Query: 1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGA--NVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIA 540
+++LD+LH F GLGRTILGPEEN+R + + L YI THYTAPRMV+ GAGA++H++L G+A + FG LP P G V DPA+FTG D R+ ++ A++ALAF+G+SWT E+AFPLM+MQT++G +DR+SG NV + Q +A E+ HS +TFNTCY DTGLFGIYA+A
Sbjct: 205 ELVLDHLHATAFQGTGLGRTILGPEENIRSLAKSDLSGYINTHYTAPRMVIAGAGAIDHEELCGLAGEHFGSLPTAPKDGVEVAMDPAVFTGSDVRIRFDSDNTAHVALAFQGASWTSEYAFPLMIMQTMLGSYDRASGLGKNVASKMCQEVAE--HELAHSISTFNTCYKDTGLFGIYAVA 384
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: A0A7S2V5V4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5V4_9STRA) HSP 1 Score: 211 bits (538), Expect = 2.580e-63 Identity = 105/194 (54.12%), Postives = 128/194 (65.98%), Query Frame = 1
Query: 1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLP--------RYPPQGAVVTPDPAIFTGGDKRVLTS---KESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAKRE 549
+VILDYLHEV ++ GLGRTILGPEENVR ++R+ L YI THYTAPRMVV GAGALEH +LV MA+ F LP Y ++ DPA+FTG K V KE ++ALAFEG+SWT E AFPLM++QTIMG WDR+ G ++ +E+CHSYTTFNTCY DTGL G+Y + E
Sbjct: 175 EVILDYLHEVAYNGTGLGRTILGPEENVRGLSREDLLGYIQTHYTAPRMVVAGAGALEHQELVDMAEHFFSGLPTAADQQNSHYASTDLLILDDPAVFTGSHKLVPGGDGVKEENTHIALAFEGASWTSEWAFPLMILQTIMGSWDRTCGVGKAGDSQFLKRLAHKELCHSYTTFNTCYKDTGLIGLYCVVPHE 368
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: A0A7S1D561_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D561_CYCTE) HSP 1 Score: 211 bits (536), Expect = 5.370e-63 Identity = 98/182 (53.85%), Postives = 131/182 (71.98%), Query Frame = 1
Query: 1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSS--GANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIA 540
+++LD+LH F GLGRTILGPEEN+R +T+ L DYI THYTAPRMV+ GAGA+ H++L G+ADQ FG+LP P G V DPA+FTG D RV A++A+AFEG++WT E+AFPLM+MQ+I+G +DR++ G N+ + Q +A HS +TFNTCY DTGLFG+YA++
Sbjct: 187 ELVLDHLHGTAFQGTGLGRTILGPEENIRSLTKNDLLDYISTHYTAPRMVIAGAGAINHEELCGLADQHFGKLPTVPAGGVEVAMDPAVFTGSDIRVKFDSHDTAHVAIAFEGAAWTSEYAFPLMLMQSILGSYDRTAPIGKNIASRMCQEIATEGS--AHSVSTFNTCYKDTGLFGVYAVS 366
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: F0W4S6_9STRA (Mitochondrialprocessing peptidase subunit beta puta n=2 Tax=Albugo TaxID=65356 RepID=F0W4S6_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.140e-61 Identity = 98/182 (53.85%), Postives = 131/182 (71.98%), Query Frame = 1
Query: 1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGA--NVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIA 540
+V+ D LHE + GLGRTILGP+EN+R +T++ L+DYI THYTA RMV+ GAGA++H +LV +A++ FG LP +T DPA F G D RV E+ ++ALAFEG SWT E+AFPL++MQT++G WDR+ GA N LGQA+A E+ HS++ FNTCY+DTGLFG+YA+A
Sbjct: 172 EVVFDRLHETAYMGNGLGRTILGPQENIRSLTKQDLRDYIATHYTADRMVIAGAGAIDHQELVQLAEKSFGNLPTTASNYQAITLDPARFIGSDIRVPNDSEALVHVALAFEGFSWTSEYAFPLLIMQTLIGSWDRTDGAGLNSSSKLGQAVAE--HELVHSFSAFNTCYHDTGLFGVYAVA 351
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: A0A7S3XSD1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSD1_HETAK) HSP 1 Score: 206 bits (524), Expect = 3.730e-61 Identity = 99/183 (54.10%), Postives = 126/183 (68.85%), Query Frame = 1
Query: 1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGANVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAKRE 549
+V+LD+LH F GLGRTILGPEEN+R + R L+ +I THYTA R VV GAGAL H + V +A + FG LP P + A +PA+F G + RV+ + EA++ALAFEG+SWT E AFPLM +Q ++GGWDR+SGA P A ++ + HSYTTFNTCY DTGLFG+YAIA E
Sbjct: 192 EVLLDHLHAAAFGMQGLGRTILGPEENIRALQRSDLEGFIKTHYTADRFVVAGAGALSHQETVELAQKFFGHLP--PAEKAPPGAEPAVFRGAENRVVDMSQDEAHVALAFEGASWTSEWAFPLMCLQALLGGWDRASGAGAATPSPLAQRVAGLGLAHSYTTFNTCYQDTGLFGVYAIAPPE 372
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: K3WG69_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WG69_GLOUD) HSP 1 Score: 205 bits (522), Expect = 4.510e-61 Identity = 100/184 (54.35%), Postives = 128/184 (69.57%), Query Frame = 1
Query: 1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGA--NVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAKR 546
+VI D LHE F GLGRTILGP EN+R + + L+DYI THYTAPRMVV GAGA++H QLV +A FG LP P T +P F G D R+ ++ A++A+AFEG SWT EHAFPL++MQT++G WDR+SGA N+ LGQ +A +E+ HS+ FNTCY DTGLFG+YA+A +
Sbjct: 173 EVIFDRLHETAFMGNGLGRTILGPIENIRNLKKADLEDYIATHYTAPRMVVAGAGAVDHSQLVDLAKNAFGGLPTEPK--VAPTLEPVRFVGSDVRIKDDEQPLAHMAIAFEGFSWTSEHAFPLLIMQTLLGSWDRTSGAGINMSSKLGQVVAE--KELAHSFMAFNTCYQDTGLFGVYAVADQ 352
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Match: M4BT98_HYAAE (Uncharacterized protein n=28 Tax=Peronosporaceae TaxID=4777 RepID=M4BT98_HYAAE) HSP 1 Score: 204 bits (520), Expect = 1.670e-60 Identity = 100/184 (54.35%), Postives = 127/184 (69.02%), Query Frame = 1
Query: 1 QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVVVGAGALEHDQLVGMADQCFGRLPRYPPQGAVVTPDPAIFTGGDKRVLTSKESEAYLALAFEGSSWTDEHAFPLMVMQTIMGGWDRSSGA--NVVPPLGQALAMSPREICHSYTTFNTCYNDTGLFGIYAIAKR 546
+V+ D LHE F GLGRTILGP EN+R + + LQDYI THYTAPRMV+ GAGA++H QLV +A + FG LP P T + F G D RV A++ALAFEG SWT EH+FPL++MQT++G WDR+SGA N+ LGQ +A +E+ HSY +FNTCY DTGLFG+YA+A +
Sbjct: 201 EVVFDRLHETAFMGNGLGRTILGPTENIRNLKKSDLQDYIATHYTAPRMVIAGAGAVDHSQLVELAQKSFGELPTTP--AVAPTLELVRFVGSDVRVKDDSMPLAHVALAFEGFSWTSEHSFPLLIMQTLLGSWDRTSGAGMNMSSKLGQVVAE--KELAHSYMSFNTCYQDTGLFGVYAVADK 380 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81143.15770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81143.15770.1 >prot_H-elongata_contig81143.15770.1 ID=prot_H-elongata_contig81143.15770.1|Name=mRNA_H-elongata_contig81143.15770.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp QVILDYLHEVCFHECGLGRTILGPEENVRKITRKQLQDYILTHYTAPRMVback to top mRNA from alignment at H-elongata_contig81143:162..2269+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig81143.15770.1 ID=mRNA_H-elongata_contig81143.15770.1|Name=mRNA_H-elongata_contig81143.15770.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2108bp|location=Sequence derived from alignment at H-elongata_contig81143:162..2269+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig81143:162..2269+ >mRNA_H-elongata_contig81143.15770.1 ID=mRNA_H-elongata_contig81143.15770.1|Name=mRNA_H-elongata_contig81143.15770.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at H-elongata_contig81143:162..2269+ (Himanthalia elongata Himel1 dioecious)back to top |