prot_H-elongata_contig120508.1575.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig120508.1575.1
Unique Nameprot_H-elongata_contig120508.1575.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length237
Homology
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 5.610e-67
Identity = 123/243 (50.62%), Postives = 160/243 (65.84%), Query Frame = 0
Query:    1 MLERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDIT-THIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQ------LRDAIQLHERLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL 236
            ML+ +  A+T+DGWTS   ++Y   T ++ID E+ LH L++DC   +G TTG D A  V G++  H +TG V A VTDCEPSMI  G  LE    T +HIG  NHR E TT+ VFNG  +   + L R LV RY KSSQMA RL ++CGIL++  L V+QDV TRW ST+        L  AI+LHE +D + PLL+D DWEVL+LIE ILRPFM+A  +LEGA+YV GS+ +  + +L  GL
Sbjct:   35 MLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGL 276          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 8.020e-66
Identity = 120/243 (49.38%), Postives = 158/243 (65.02%), Query Frame = 0
Query:    1 MLERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITT-HIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQ------LRDAIQLHERLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL 236
            ML+ ++ A+T+DGWTS   ++Y   T ++ID  + LH L+++C   +G T G D A  +  +I  HG+TG VTA VTDCEPSM+  G  LE       HIG  NHR E TT+ VFNG  +   +A  RA+V RY +SSQM+ RL    GILK+  L V+QDV TRW S++        L  AI+LHE  DNIAP+L++ DWEVL+LIE ILRPFM+A  +LEGAKYV GS+ VP + +L  GL
Sbjct:   71 MLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGL 312          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 1.450e-63
Identity = 110/237 (46.41%), Postives = 149/237 (62.87%), Query Frame = 0
Query:    2 LERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQ------LRDAIQLHERLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDL 232
            L  +H A+TSDGWTS   DTY +FT ++I   FDL  L ++CK   G+TTG D    VK +I+ +G+T    A  TDCEPSM+  G  LEE +  TH+G   HR E  T+  F GP V + +AL R +VTRY  SSQ +DRL++M  I++V   +VVQDV TRW ST+        LR  I  HER+D+I PLL + DWEVL+++E + +PF+ +    E +K V  SLV+PY+ DL
Sbjct:   45 LTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADL 281          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 1.840e-59
Identity = 111/238 (46.64%), Postives = 145/238 (60.92%), Query Frame = 0
Query:    5 QHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQ------LRDAIQLHERLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL 236
            +H A+TSDGWT    DTY  FT ++I   FDL  L ++CK    +T G D    VK +I+ +G+TG   A  TDCE SM+  G  LEE +  TH+G   HR E  T+  F GP V + +AL R +VTRYT SSQ +DRL+++C I++V    VVQDV TRW ST+        LR  I  HE +D+  PLL + DWEVL+L+E +L+PFM A   LE +K V   LV PY+ DL  GL
Sbjct:    4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGL 241          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A8N7W5P2_SPOFR (zinc finger BED domain-containing protein 1-like n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A8N7W5P2_SPOFR)

HSP 1 Score: 94.4 bits (233), Expect = 1.630e-18
Identity = 70/245 (28.57%), Postives = 115/245 (46.94%), Query Frame = 0
Query:    9 MTSDGWTSCCKDTYHFFTASFID-DEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTD----CEPSMIVLGWELEERDITTHIGRCNHRFE-CTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLK---EMCG-ILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHERLDNI-------APLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL 236
            +T D WTS   D Y   T  +ID DEF +    ++C  + G  T  + +  +K +     +T  V  AV+D     + +++ LGW+        H G   H      T+ + + PE+   +A  R +V  + +S+Q  ++LK   E  G I K P    +QDV TRW STF  L+  +++ E +++           LT  DW+V + +  +L+P  E   E+    +V GS+V+P    L   L
Sbjct:  199 ITCDVWTSRANDGYLAITGHYIDADEFKMKSALLECVPLLGSHTAQNLSTEIKRVTDEWKITDKVILAVSDNGANIKKALLDLGWK--------HFGCYAHTLNLAVTSAIESSPELNNLLARSRNIVAFFKRSTQAWEKLKRYQEQAGKIAKRP----LQDVSTRWNSTFYMLQRLVEIKEEINSALCNMHSNVHSLTSYDWDVCEGLCKVLKPCEEVTREMSAQNFVCGSVVIPITRGLKTAL 431          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: UPI000C143D9D (zinc finger BED domain-containing protein 1-like n=1 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C143D9D)

HSP 1 Score: 93.2 bits (230), Expect = 4.050e-18
Identity = 65/238 (27.31%), Postives = 110/238 (46.22%), Query Frame = 0
Query:    3 ERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMI-----VLGWELEERDITTHIGRCNHRFECTT--ALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHER-------LDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVV 226
            E Q   +++D WTS   ++Y   T  +++D F+   + + C   SG  T  + A+ +K ++   G+ G V   V+D   +++     +LG +        H G   H         L F   ++ +     R +VT Y KS+  A+RL +      +    ++QDV TRW STF  L   ++L E        +D   P LT +DW + + + ++LRPF E    + G KY+  S V+
Sbjct:  184 EVQSICLSTDLWTSRSTESYIAVTGHYLNDVFEFKTVLLGCCYFSGNHTSQNIASEIKDIVDRWGINGKVNFVVSDNGANVVKAVKEILGLK--------HFGCFAHTLNLIVQDGLKFCKDKIDKV----RRIVTHYKKSTVSAERLAKYQLQQNIQPKHLIQDVDTRWNSTFYMLSRFVELKEAVRSTMALIDRDLPQLTAEDWSMFEELIVVLRPFEELTKSMSGEKYLTASSVI 409          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: UPI000CE1F3DA (zinc finger BED domain-containing protein 4-like n=10 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE1F3DA)

HSP 1 Score: 92.4 bits (228), Expect = 7.080e-18
Identity = 71/232 (30.60%), Postives = 103/232 (44.40%), Query Frame = 0
Query:    8 AMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHE-------RLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDL 232
            ++T+D WTS   DTY   T  FI +E +L  + +         T    A     L+   G+ G VT  VTDC P+M+     L  R I       N   + + A     PE++   +  R +V  +  S+   ++L EM   L  P  +++Q+V TRW STF  L    +  E        L    P LT +D++ +     IL PF EA  EL   K V+ S V+P V  L
Sbjct:  140 SLTADMWTSINMDTYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANILLLRHIMCFAHMLNLVVKKSLAQT---PELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDLPPLTSEDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMVKML 368          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A7E5WZM1_TRINI (zinc finger BED domain-containing protein 1-like n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5WZM1_TRINI)

HSP 1 Score: 92.0 bits (227), Expect = 1.020e-17
Identity = 66/238 (27.73%), Postives = 111/238 (46.64%), Query Frame = 0
Query:    3 ERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIV-----LGWELEERDITTHIGRCNHRFECTTALVFNGPEV--KRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHERLDNIA-------PLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVV 226
            E Q   +T+D WTS   ++Y   T  +I  + +   + + C + SG  T T+ A+ +  LI   G+   +  AV+D   +++      LGW+        H G   H    T  L+ N   V  K  +   + +V  Y +S+  ++RL +     +     ++QDV TRW STF  +R  I+L E + +         P++T+D+W  L  +  ILRPF E  + +    Y+ GS V+
Sbjct:  191 EVQTMCITTDLWTSRVTESYIAVTGHYITKDLEFKTVLLGCCHFSGNHTATNIADEISALIDNWGLKDKINFAVSDNATNVVKAIKEGLGWK--------HFGCFAH----TLNLIVNDALVLVKGLIEKVKTIVAHYKRSTVSSERLSKYQVQQQQTPKHLIQDVETRWNSTFYMVRRFIELQEAVRSTLALVNKNLPVITNDEWSTLSQLCQILRPFEEVTSMMSAQNYLTGSYVI 416          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI)

HSP 1 Score: 91.7 bits (226), Expect = 1.360e-17
Identity = 58/239 (24.27%), Postives = 105/239 (43.93%), Query Frame = 0
Query:    1 MLERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHERL-------DNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDL 232
            +L  +   +T+D WTS   + Y   TA F+D+ F LH L ++C          D A  +K +  + G+   +  AV+D   +M     +L E     H G   H             +++  +   + +V  + +S    ++L       +   L+++Q+V TRW ST+  L   + L E +       D   P L  ++W++LK +  IL+P+      + G KY   ++V+P  + L
Sbjct:  177 ILTGKSFCITTDSWTSNNTENYIGVTAHFLDENFKLHSLLLECSKTDASHKAEDIAGTLKRITQYWGIDQKIILAVSDNASNMQKAIQQLLE---WKHFGCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPYENVTKAISGDKYCTAAIVIPLCNGL 412          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: UPI000CE23A86 (zinc finger BED domain-containing protein 4-like n=1 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE23A86)

HSP 1 Score: 91.3 bits (225), Expect = 1.360e-17
Identity = 70/232 (30.17%), Postives = 102/232 (43.97%), Query Frame = 0
Query:    8 AMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHE-------RLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDL 232
            ++T+D WTS   D Y   T  FI +E +L  + +         T    A     L+   G+ G VT  VTDC P+M+     L  R I       N   + + A     PE++   +  R +V  +  S+   ++L EM   L  P  +++Q+V TRW STF  L    +  E        L    P LT +D++ +     IL PF EA  EL   K V+ S V+P V  L
Sbjct:  140 SLTADMWTSINMDAYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANILLFRHIMCFAHMLNLVVKKSLAQT---PELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDLPPLTSEDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMVKTL 368          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI5.610e-6750.62Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE8.020e-6649.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE1.450e-6346.41Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE1.840e-5946.64Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A8N7W5P2_SPOFR1.630e-1828.57zinc finger BED domain-containing protein 1-like n... [more]
UPI000C143D9D4.050e-1827.31zinc finger BED domain-containing protein 1-like n... [more]
UPI000CE1F3DA7.080e-1830.60zinc finger BED domain-containing protein 4-like n... [more]
A0A7E5WZM1_TRINI1.020e-1727.73zinc finger BED domain-containing protein 1-like n... [more]
A0A224XKI7_9HEMI1.360e-1724.27Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylu... [more]
UPI000CE23A861.360e-1730.17zinc finger BED domain-containing protein 4-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 3..233
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120508contigH-elongata_contig120508:1258..1968 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120508.1575.1mRNA_H-elongata_contig120508.1575.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig120508 1258..1968 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig120508.1575.1 ID=prot_H-elongata_contig120508.1575.1|Name=mRNA_H-elongata_contig120508.1575.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp
MLERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKT
TGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIG
RCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGIL
KVPSLQVVQDVGTRWTSTFRQLRDAIQLHERLDNIAPLLTDDDWEVLKLI
ELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf