mRNA_H-elongata_contig120508.1575.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 225 bits (574), Expect = 5.610e-67 Identity = 123/243 (50.62%), Postives = 160/243 (65.84%), Query Frame = 1
Query: 1 MLERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDIT-THIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQ------LRDAIQLHERLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL 708
ML+ + A+T+DGWTS ++Y T ++ID E+ LH L++DC +G TTG D A V G++ H +TG V A VTDCEPSMI G LE T +HIG NHR E TT+ VFNG + + L R LV RY KSSQMA RL ++CGIL++ L V+QDV TRW ST+ L AI+LHE +D + PLL+D DWEVL+LIE ILRPFM+A +LEGA+YV GS+ + + +L GL
Sbjct: 35 MLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGL 276
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 222 bits (565), Expect = 8.020e-66 Identity = 120/243 (49.38%), Postives = 158/243 (65.02%), Query Frame = 1
Query: 1 MLERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITT-HIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQ------LRDAIQLHERLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL 708
ML+ ++ A+T+DGWTS ++Y T ++ID + LH L+++C +G T G D A + +I HG+TG VTA VTDCEPSM+ G LE HIG NHR E TT+ VFNG + +A RA+V RY +SSQM+ RL GILK+ L V+QDV TRW S++ L AI+LHE DNIAP+L++ DWEVL+LIE ILRPFM+A +LEGAKYV GS+ VP + +L GL
Sbjct: 71 MLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGL 312
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 214 bits (546), Expect = 1.450e-63 Identity = 110/237 (46.41%), Postives = 149/237 (62.87%), Query Frame = 1
Query: 4 LERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQ------LRDAIQLHERLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDL 696
L +H A+TSDGWTS DTY +FT ++I FDL L ++CK G+TTG D VK +I+ +G+T A TDCEPSM+ G LEE + TH+G HR E T+ F GP V + +AL R +VTRY SSQ +DRL++M I++V +VVQDV TRW ST+ LR I HER+D+I PLL + DWEVL+++E + +PF+ + E +K V SLV+PY+ DL
Sbjct: 45 LTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADL 281
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 211 bits (537), Expect = 1.840e-59 Identity = 111/238 (46.64%), Postives = 145/238 (60.92%), Query Frame = 1
Query: 13 QHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQ------LRDAIQLHERLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL 708
+H A+TSDGWT DTY FT ++I FDL L ++CK +T G D VK +I+ +G+TG A TDCE SM+ G LEE + TH+G HR E T+ F GP V + +AL R +VTRYT SSQ +DRL+++C I++V VVQDV TRW ST+ LR I HE +D+ PLL + DWEVL+L+E +L+PFM A LE +K V LV PY+ DL GL
Sbjct: 4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGL 241
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A8N7W5P2_SPOFR (zinc finger BED domain-containing protein 1-like n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A8N7W5P2_SPOFR) HSP 1 Score: 94.4 bits (233), Expect = 1.630e-18 Identity = 70/245 (28.57%), Postives = 115/245 (46.94%), Query Frame = 1
Query: 25 MTSDGWTSCCKDTYHFFTASFID-DEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTD----CEPSMIVLGWELEERDITTHIGRCNHRFE-CTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLK---EMCG-ILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHERLDNI-------APLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL 708
+T D WTS D Y T +ID DEF + ++C + G T + + +K + +T V AV+D + +++ LGW+ H G H T+ + + PE+ +A R +V + +S+Q ++LK E G I K P +QDV TRW STF L+ +++ E +++ LT DW+V + + +L+P E E+ +V GS+V+P L L
Sbjct: 199 ITCDVWTSRANDGYLAITGHYIDADEFKMKSALLECVPLLGSHTAQNLSTEIKRVTDEWKITDKVILAVSDNGANIKKALLDLGWK--------HFGCYAHTLNLAVTSAIESSPELNNLLARSRNIVAFFKRSTQAWEKLKRYQEQAGKIAKRP----LQDVSTRWNSTFYMLQRLVEIKEEINSALCNMHSNVHSLTSYDWDVCEGLCKVLKPCEEVTREMSAQNFVCGSVVIPITRGLKTAL 431
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: UPI000C143D9D (zinc finger BED domain-containing protein 1-like n=1 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C143D9D) HSP 1 Score: 93.2 bits (230), Expect = 4.050e-18 Identity = 65/238 (27.31%), Postives = 110/238 (46.22%), Query Frame = 1
Query: 7 ERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMI-----VLGWELEERDITTHIGRCNHRFECTT--ALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHER-------LDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVV 678
E Q +++D WTS ++Y T +++D F+ + + C SG T + A+ +K ++ G+ G V V+D +++ +LG + H G H L F ++ + R +VT Y KS+ A+RL + + ++QDV TRW STF L ++L E +D P LT +DW + + + ++LRPF E + G KY+ S V+
Sbjct: 184 EVQSICLSTDLWTSRSTESYIAVTGHYLNDVFEFKTVLLGCCYFSGNHTSQNIASEIKDIVDRWGINGKVNFVVSDNGANVVKAVKEILGLK--------HFGCFAHTLNLIVQDGLKFCKDKIDKV----RRIVTHYKKSTVSAERLAKYQLQQNIQPKHLIQDVDTRWNSTFYMLSRFVELKEAVRSTMALIDRDLPQLTAEDWSMFEELIVVLRPFEELTKSMSGEKYLTASSVI 409
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: UPI000CE1F3DA (zinc finger BED domain-containing protein 4-like n=10 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE1F3DA) HSP 1 Score: 92.4 bits (228), Expect = 7.080e-18 Identity = 71/232 (30.60%), Postives = 103/232 (44.40%), Query Frame = 1
Query: 22 AMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHE-------RLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDL 696
++T+D WTS DTY T FI +E +L + + T A L+ G+ G VT VTDC P+M+ L R I N + + A PE++ + R +V + S+ ++L EM L P +++Q+V TRW STF L + E L P LT +D++ + IL PF EA EL K V+ S V+P V L
Sbjct: 140 SLTADMWTSINMDTYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANILLLRHIMCFAHMLNLVVKKSLAQT---PELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDLPPLTSEDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMVKML 368
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A7E5WZM1_TRINI (zinc finger BED domain-containing protein 1-like n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5WZM1_TRINI) HSP 1 Score: 92.0 bits (227), Expect = 1.020e-17 Identity = 66/238 (27.73%), Postives = 111/238 (46.64%), Query Frame = 1
Query: 7 ERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIV-----LGWELEERDITTHIGRCNHRFECTTALVFNGPEV--KRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHERLDNIA-------PLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVV 678
E Q +T+D WTS ++Y T +I + + + + C + SG T T+ A+ + LI G+ + AV+D +++ LGW+ H G H T L+ N V K + + +V Y +S+ ++RL + + ++QDV TRW STF +R I+L E + + P++T+D+W L + ILRPF E + + Y+ GS V+
Sbjct: 191 EVQTMCITTDLWTSRVTESYIAVTGHYITKDLEFKTVLLGCCHFSGNHTATNIADEISALIDNWGLKDKINFAVSDNATNVVKAIKEGLGWK--------HFGCFAH----TLNLIVNDALVLVKGLIEKVKTIVAHYKRSTVSSERLSKYQVQQQQTPKHLIQDVETRWNSTFYMVRRFIELQEAVRSTLALVNKNLPVITNDEWSTLSQLCQILRPFEEVTSMMSAQNYLTGSYVI 416
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI) HSP 1 Score: 91.7 bits (226), Expect = 1.360e-17 Identity = 58/239 (24.27%), Postives = 105/239 (43.93%), Query Frame = 1
Query: 1 MLERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHERL-------DNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDL 696
+L + +T+D WTS + Y TA F+D+ F LH L ++C D A +K + + G+ + AV+D +M +L E H G H +++ + + +V + +S ++L + L+++Q+V TRW ST+ L + L E + D P L ++W++LK + IL+P+ + G KY ++V+P + L
Sbjct: 177 ILTGKSFCITTDSWTSNNTENYIGVTAHFLDENFKLHSLLLECSKTDASHKAEDIAGTLKRITQYWGIDQKIILAVSDNASNMQKAIQQLLE---WKHFGCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPYENVTKAISGDKYCTAAIVIPLCNGL 412
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: UPI000CE23A86 (zinc finger BED domain-containing protein 4-like n=1 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE23A86) HSP 1 Score: 91.3 bits (225), Expect = 1.360e-17 Identity = 70/232 (30.17%), Postives = 102/232 (43.97%), Query Frame = 1
Query: 22 AMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHE-------RLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDL 696
++T+D WTS D Y T FI +E +L + + T A L+ G+ G VT VTDC P+M+ L R I N + + A PE++ + R +V + S+ ++L EM L P +++Q+V TRW STF L + E L P LT +D++ + IL PF EA EL K V+ S V+P V L
Sbjct: 140 SLTADMWTSINMDAYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANILLFRHIMCFAHMLNLVVKKSLAQT---PELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDLPPLTSEDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMVKTL 368 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig120508.1575.1 >prot_H-elongata_contig120508.1575.1 ID=prot_H-elongata_contig120508.1575.1|Name=mRNA_H-elongata_contig120508.1575.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp MLERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTback to top mRNA from alignment at H-elongata_contig120508:1258..1968- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig120508.1575.1 ID=mRNA_H-elongata_contig120508.1575.1|Name=mRNA_H-elongata_contig120508.1575.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=711bp|location=Sequence derived from alignment at H-elongata_contig120508:1258..1968- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig120508:1258..1968- >mRNA_H-elongata_contig120508.1575.1 ID=mRNA_H-elongata_contig120508.1575.1|Name=mRNA_H-elongata_contig120508.1575.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1422bp|location=Sequence derived from alignment at H-elongata_contig120508:1258..1968- (Himanthalia elongata Himel1 dioecious)back to top |