mRNA_H-elongata_contig120508.1575.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig120508.1575.1
Unique NamemRNA_H-elongata_contig120508.1575.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 5.610e-67
Identity = 123/243 (50.62%), Postives = 160/243 (65.84%), Query Frame = 1
Query:    1 MLERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDIT-THIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQ------LRDAIQLHERLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL 708
            ML+ +  A+T+DGWTS   ++Y   T ++ID E+ LH L++DC   +G TTG D A  V G++  H +TG V A VTDCEPSMI  G  LE    T +HIG  NHR E TT+ VFNG  +   + L R LV RY KSSQMA RL ++CGIL++  L V+QDV TRW ST+        L  AI+LHE +D + PLL+D DWEVL+LIE ILRPFM+A  +LEGA+YV GS+ +  + +L  GL
Sbjct:   35 MLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGL 276          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 8.020e-66
Identity = 120/243 (49.38%), Postives = 158/243 (65.02%), Query Frame = 1
Query:    1 MLERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITT-HIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQ------LRDAIQLHERLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL 708
            ML+ ++ A+T+DGWTS   ++Y   T ++ID  + LH L+++C   +G T G D A  +  +I  HG+TG VTA VTDCEPSM+  G  LE       HIG  NHR E TT+ VFNG  +   +A  RA+V RY +SSQM+ RL    GILK+  L V+QDV TRW S++        L  AI+LHE  DNIAP+L++ DWEVL+LIE ILRPFM+A  +LEGAKYV GS+ VP + +L  GL
Sbjct:   71 MLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGL 312          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 1.450e-63
Identity = 110/237 (46.41%), Postives = 149/237 (62.87%), Query Frame = 1
Query:    4 LERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQ------LRDAIQLHERLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDL 696
            L  +H A+TSDGWTS   DTY +FT ++I   FDL  L ++CK   G+TTG D    VK +I+ +G+T    A  TDCEPSM+  G  LEE +  TH+G   HR E  T+  F GP V + +AL R +VTRY  SSQ +DRL++M  I++V   +VVQDV TRW ST+        LR  I  HER+D+I PLL + DWEVL+++E + +PF+ +    E +K V  SLV+PY+ DL
Sbjct:   45 LTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADL 281          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 1.840e-59
Identity = 111/238 (46.64%), Postives = 145/238 (60.92%), Query Frame = 1
Query:   13 QHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQ------LRDAIQLHERLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL 708
            +H A+TSDGWT    DTY  FT ++I   FDL  L ++CK    +T G D    VK +I+ +G+TG   A  TDCE SM+  G  LEE +  TH+G   HR E  T+  F GP V + +AL R +VTRYT SSQ +DRL+++C I++V    VVQDV TRW ST+        LR  I  HE +D+  PLL + DWEVL+L+E +L+PFM A   LE +K V   LV PY+ DL  GL
Sbjct:    4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGL 241          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A8N7W5P2_SPOFR (zinc finger BED domain-containing protein 1-like n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A8N7W5P2_SPOFR)

HSP 1 Score: 94.4 bits (233), Expect = 1.630e-18
Identity = 70/245 (28.57%), Postives = 115/245 (46.94%), Query Frame = 1
Query:   25 MTSDGWTSCCKDTYHFFTASFID-DEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTD----CEPSMIVLGWELEERDITTHIGRCNHRFE-CTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLK---EMCG-ILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHERLDNI-------APLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL 708
            +T D WTS   D Y   T  +ID DEF +    ++C  + G  T  + +  +K +     +T  V  AV+D     + +++ LGW+        H G   H      T+ + + PE+   +A  R +V  + +S+Q  ++LK   E  G I K P    +QDV TRW STF  L+  +++ E +++           LT  DW+V + +  +L+P  E   E+    +V GS+V+P    L   L
Sbjct:  199 ITCDVWTSRANDGYLAITGHYIDADEFKMKSALLECVPLLGSHTAQNLSTEIKRVTDEWKITDKVILAVSDNGANIKKALLDLGWK--------HFGCYAHTLNLAVTSAIESSPELNNLLARSRNIVAFFKRSTQAWEKLKRYQEQAGKIAKRP----LQDVSTRWNSTFYMLQRLVEIKEEINSALCNMHSNVHSLTSYDWDVCEGLCKVLKPCEEVTREMSAQNFVCGSVVIPITRGLKTAL 431          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: UPI000C143D9D (zinc finger BED domain-containing protein 1-like n=1 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C143D9D)

HSP 1 Score: 93.2 bits (230), Expect = 4.050e-18
Identity = 65/238 (27.31%), Postives = 110/238 (46.22%), Query Frame = 1
Query:    7 ERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMI-----VLGWELEERDITTHIGRCNHRFECTT--ALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHER-------LDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVV 678
            E Q   +++D WTS   ++Y   T  +++D F+   + + C   SG  T  + A+ +K ++   G+ G V   V+D   +++     +LG +        H G   H         L F   ++ +     R +VT Y KS+  A+RL +      +    ++QDV TRW STF  L   ++L E        +D   P LT +DW + + + ++LRPF E    + G KY+  S V+
Sbjct:  184 EVQSICLSTDLWTSRSTESYIAVTGHYLNDVFEFKTVLLGCCYFSGNHTSQNIASEIKDIVDRWGINGKVNFVVSDNGANVVKAVKEILGLK--------HFGCFAHTLNLIVQDGLKFCKDKIDKV----RRIVTHYKKSTVSAERLAKYQLQQNIQPKHLIQDVDTRWNSTFYMLSRFVELKEAVRSTMALIDRDLPQLTAEDWSMFEELIVVLRPFEELTKSMSGEKYLTASSVI 409          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: UPI000CE1F3DA (zinc finger BED domain-containing protein 4-like n=10 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE1F3DA)

HSP 1 Score: 92.4 bits (228), Expect = 7.080e-18
Identity = 71/232 (30.60%), Postives = 103/232 (44.40%), Query Frame = 1
Query:   22 AMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHE-------RLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDL 696
            ++T+D WTS   DTY   T  FI +E +L  + +         T    A     L+   G+ G VT  VTDC P+M+     L  R I       N   + + A     PE++   +  R +V  +  S+   ++L EM   L  P  +++Q+V TRW STF  L    +  E        L    P LT +D++ +     IL PF EA  EL   K V+ S V+P V  L
Sbjct:  140 SLTADMWTSINMDTYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANILLLRHIMCFAHMLNLVVKKSLAQT---PELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDLPPLTSEDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMVKML 368          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A7E5WZM1_TRINI (zinc finger BED domain-containing protein 1-like n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5WZM1_TRINI)

HSP 1 Score: 92.0 bits (227), Expect = 1.020e-17
Identity = 66/238 (27.73%), Postives = 111/238 (46.64%), Query Frame = 1
Query:    7 ERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIV-----LGWELEERDITTHIGRCNHRFECTTALVFNGPEV--KRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHERLDNIA-------PLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVV 678
            E Q   +T+D WTS   ++Y   T  +I  + +   + + C + SG  T T+ A+ +  LI   G+   +  AV+D   +++      LGW+        H G   H    T  L+ N   V  K  +   + +V  Y +S+  ++RL +     +     ++QDV TRW STF  +R  I+L E + +         P++T+D+W  L  +  ILRPF E  + +    Y+ GS V+
Sbjct:  191 EVQTMCITTDLWTSRVTESYIAVTGHYITKDLEFKTVLLGCCHFSGNHTATNIADEISALIDNWGLKDKINFAVSDNATNVVKAIKEGLGWK--------HFGCFAH----TLNLIVNDALVLVKGLIEKVKTIVAHYKRSTVSSERLSKYQVQQQQTPKHLIQDVETRWNSTFYMVRRFIELQEAVRSTLALVNKNLPVITNDEWSTLSQLCQILRPFEEVTSMMSAQNYLTGSYVI 416          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI)

HSP 1 Score: 91.7 bits (226), Expect = 1.360e-17
Identity = 58/239 (24.27%), Postives = 105/239 (43.93%), Query Frame = 1
Query:    1 MLERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHERL-------DNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDL 696
            +L  +   +T+D WTS   + Y   TA F+D+ F LH L ++C          D A  +K +  + G+   +  AV+D   +M     +L E     H G   H             +++  +   + +V  + +S    ++L       +   L+++Q+V TRW ST+  L   + L E +       D   P L  ++W++LK +  IL+P+      + G KY   ++V+P  + L
Sbjct:  177 ILTGKSFCITTDSWTSNNTENYIGVTAHFLDENFKLHSLLLECSKTDASHKAEDIAGTLKRITQYWGIDQKIILAVSDNASNMQKAIQQLLE---WKHFGCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPYENVTKAISGDKYCTAAIVIPLCNGL 412          
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Match: UPI000CE23A86 (zinc finger BED domain-containing protein 4-like n=1 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE23A86)

HSP 1 Score: 91.3 bits (225), Expect = 1.360e-17
Identity = 70/232 (30.17%), Postives = 102/232 (43.97%), Query Frame = 1
Query:   22 AMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKTTGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIGRCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGILKVPSLQVVQDVGTRWTSTFRQLRDAIQLHE-------RLDNIAPLLTDDDWEVLKLIELILRPFMEAHTELEGAKYVAGSLVVPYVHDL 696
            ++T+D WTS   D Y   T  FI +E +L  + +         T    A     L+   G+ G VT  VTDC P+M+     L  R I       N   + + A     PE++   +  R +V  +  S+   ++L EM   L  P  +++Q+V TRW STF  L    +  E        L    P LT +D++ +     IL PF EA  EL   K V+ S V+P V  L
Sbjct:  140 SLTADMWTSINMDAYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANILLFRHIMCFAHMLNLVVKKSLAQT---PELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDLPPLTSEDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMVKTL 368          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120508.1575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI5.610e-6750.62Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE8.020e-6649.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE1.450e-6346.41Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE1.840e-5946.64Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A8N7W5P2_SPOFR1.630e-1828.57zinc finger BED domain-containing protein 1-like n... [more]
UPI000C143D9D4.050e-1827.31zinc finger BED domain-containing protein 1-like n... [more]
UPI000CE1F3DA7.080e-1830.60zinc finger BED domain-containing protein 4-like n... [more]
A0A7E5WZM1_TRINI1.020e-1727.73zinc finger BED domain-containing protein 1-like n... [more]
A0A224XKI7_9HEMI1.360e-1724.27Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylu... [more]
UPI000CE23A861.360e-1730.17zinc finger BED domain-containing protein 4-like n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120508contigH-elongata_contig120508:1258..1968 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.4
Seed ortholog evalue3.5e-57
Seed eggNOG ortholog2880.D7G5Z0
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size711
Cds size711
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929706.5377953-CDS-H-elongata_contig120508:1257..19681622929706.5377953-CDS-H-elongata_contig120508:1257..1968Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig120508 1258..1968 -
1691679126.378935-CDS-H-elongata_contig120508:1257..19681691679126.378935-CDS-H-elongata_contig120508:1257..1968Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig120508 1258..1968 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120508.1575.1prot_H-elongata_contig120508.1575.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig120508 1258..1968 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig120508.1575.1

>prot_H-elongata_contig120508.1575.1 ID=prot_H-elongata_contig120508.1575.1|Name=mRNA_H-elongata_contig120508.1575.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp
MLERQHAAMTSDGWTSCCKDTYHFFTASFIDDEFDLHELAMDCKNMSGKT
TGTDSANNVKGLISFHGMTGHVTAAVTDCEPSMIVLGWELEERDITTHIG
RCNHRFECTTALVFNGPEVKRTMALQRALVTRYTKSSQMADRLKEMCGIL
KVPSLQVVQDVGTRWTSTFRQLRDAIQLHERLDNIAPLLTDDDWEVLKLI
ELILRPFMEAHTELEGAKYVAGSLVVPYVHDLHIGL*
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mRNA from alignment at H-elongata_contig120508:1258..1968-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig120508.1575.1 ID=mRNA_H-elongata_contig120508.1575.1|Name=mRNA_H-elongata_contig120508.1575.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=711bp|location=Sequence derived from alignment at H-elongata_contig120508:1258..1968- (Himanthalia elongata Himel1 dioecious)
ATGTTGGAACGCCAACATGCCGCGATGACTTCAGATGGGTGGACGTCATG TTGCAAAGACACCTACCACTTCTTCACCGCCTCCTTTATTGATGATGAGT TCGACTTGCACGAGCTTGCGATGGACTGCAAGAATATGAGTGGGAAAACT ACAGGAACGGACTCTGCGAACAACGTCAAAGGTCTGATAAGTTTCCATGG TATGACCGGGCACGTCACTGCTGCTGTAACTGACTGTGAACCATCAATGA TTGTGCTCGGCTGGGAGCTCGAAGAAAGGGATATCACGACTCACATCGGC CGCTGCAACCACCGATTCGAGTGCACCACCGCGCTGGTCTTCAACGGACC GGAGGTGAAGAGGACCATGGCACTCCAACGGGCACTCGTTACCCGGTACA CCAAATCAAGTCAAATGGCTGACCGCCTCAAAGAGATGTGCGGGATACTC AAGGTGCCTTCGCTGCAGGTGGTGCAGGATGTGGGGACCAGGTGGACCTC AACGTTTAGGCAACTGCGTGACGCAATCCAACTGCACGAGCGCCTCGACA ACATAGCACCACTGCTGACAGATGACGACTGGGAGGTGCTTAAGTTGATC GAGCTTATTCTTAGACCTTTCATGGAGGCACATACGGAGTTGGAGGGCGC AAAGTACGTCGCAGGAAGCTTGGTGGTCCCCTACGTCCACGACCTCCACA TCGGGCTGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig120508:1258..1968-

>mRNA_H-elongata_contig120508.1575.1 ID=mRNA_H-elongata_contig120508.1575.1|Name=mRNA_H-elongata_contig120508.1575.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1422bp|location=Sequence derived from alignment at H-elongata_contig120508:1258..1968- (Himanthalia elongata Himel1 dioecious)
ATGTTGGAACGCCAACATGCCGCGATGACTTCAGATGGGTGGACGTCATG
TTGCAAAGACACCTACCACTTCTTCACCGCCTCCTTTATTGATGATGAGT
TCGACTTGCACGAGCTTGCGATGGACTGCAAGAATATGAGTGGGAAAACT
ACAGGAACGGACTCTGCGAACAACGTCAAAGGTCTGATAAGTTTCCATGG
TATGACCGGGCACGTCACTGCTGCTGTAACTGACTGTGAACCATCAATGA
TTGTGCTCGGCTGGGAGCTCGAAGAAAGGGATATCACGACTCACATCGGC
CGCTGCAACCACCGATTCGAGTGCACCACCGCGCTGGTCTTCAACGGACC
GGAGGTGAAGAGGACCATGGCACTCCAACGGGCACTCGTTACCCGGTACA
CCAAATCAAGTCAAATGGCTGACCGCCTCAAAGAGATGTGCGGGATACTC
AAGGTGCCTTCGCTGCAGGTGGTGCAGGATGTGGGGACCAGGTGGACCTC
AACGTTTAGGCAACTGCGTGACGCAATCCAACTGCACGAGCGCCTCGACA
ACATAGCACCACTGCTGACAGATGACGACTGGGAGGTGCTTAAGTTGATC
GAGCTTATTCTTAGACCTTTCATGGAGGCACATACGGAGTTGGAGGGCGC
AAAGTACGTCGCAGGAAGCTTGGTGGTCCCCTACGTCCACGACCTCCACA
TCGGGCTGTAGATGTTGGAACGCCAACATGCCGCGATGACTTCAGATGGG
TGGACGTCATGTTGCAAAGACACCTACCACTTCTTCACCGCCTCCTTTAT
TGATGATGAGTTCGACTTGCACGAGCTTGCGATGGACTGCAAGAATATGA
GTGGGAAAACTACAGGAACGGACTCTGCGAACAACGTCAAAGGTCTGATA
AGTTTCCATGGTATGACCGGGCACGTCACTGCTGCTGTAACTGACTGTGA
ACCATCAATGATTGTGCTCGGCTGGGAGCTCGAAGAAAGGGATATCACGA
CTCACATCGGCCGCTGCAACCACCGATTCGAGTGCACCACCGCGCTGGTC
TTCAACGGACCGGAGGTGAAGAGGACCATGGCACTCCAACGGGCACTCGT
TACCCGGTACACCAAATCAAGTCAAATGGCTGACCGCCTCAAAGAGATGT
GCGGGATACTCAAGGTGCCTTCGCTGCAGGTGGTGCAGGATGTGGGGACC
AGGTGGACCTCAACGTTTAGGCAACTGCGTGACGCAATCCAACTGCACGA
GCGCCTCGACAACATAGCACCACTGCTGACAGATGACGACTGGGAGGTGC
TTAAGTTGATCGAGCTTATTCTTAGACCTTTCATGGAGGCACATACGGAG
TTGGAGGGCGCAAAGTACGTCGCAGGAAGCTTGGTGGTCCCCTACGTCCA
CGACCTCCACATCGGGCTGTAG
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