mRNA_H-elongata_contig79869.15638.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79869.15638.1 vs. uniprot
Match: A0A6H5L555_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L555_9PHAE) HSP 1 Score: 371 bits (953), Expect = 2.440e-125 Identity = 192/253 (75.89%), Postives = 224/253 (88.54%), Query Frame = 1
Query: 1 GVLIARLASDIAAAAVASILVSPFISIVDRSIIQSASGTMGMKSSLAQGLRVMVTKPALFSSRPDFVCTFSLYAATYLAANWITTIASETARSDTLPKFVGTTAVNMPGSIAKDQALTKLFGVVNGAARVPAASFALFTMRDVATMAAAFTLPTPMSAKIQQDFGVNSSMADGVSQLVSPGLAQLFCTPVHILGLDLYNHPKASAAARLRVVQSSFLPAMFMRVCRIGVAFGVGGLGNTAIRKCLHDAVDLNS 759
GVL ARL SD AAA++AS++VSPFISIVDR+IIQSASG+MGMK+S+AQG RV+ TKPALF +RPDF+CTF LY ATYLAAN I+T+A E +RSDT+PKF+GTTA+NMPGSIAKDQALTK+FGVV AA+VPAASFALFT+RDVATMAAAFTLPTPMSA++Q+ FGV+S MAD SQLVSPGL Q+F TPVHILGLDLYNHP++S ARLRVVQ SF+PA+ MRV RIGVAFGVGGLGNT+IR LH A+ +S
Sbjct: 58 GVLAARLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEYSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSARMQESFGVDSGMADVTSQLVSPGLVQVFSTPVHILGLDLYNHPRSSCRARLRVVQDSFMPAIAMRVARIGVAFGVGGLGNTSIRNMLHGAIAKSS 310
BLAST of mRNA_H-elongata_contig79869.15638.1 vs. uniprot
Match: D8LGM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM5_ECTSI) HSP 1 Score: 313 bits (801), Expect = 3.450e-102 Identity = 173/249 (69.48%), Postives = 199/249 (79.92%), Query Frame = 1
Query: 1 GVLIARLASDIAAAAVASILVSPFISIVDRSIIQSASGTMGMKSSLAQGLRVMVTKPALFSSRPDFVCTFSLYAATYLAANWITTIASETARSDTLPKFVGTTAVNMPGSIAKDQALTKLFGVVNGAARVPAASFALFTMRDVATMAAAFTLPTPMSAKIQQDFGVNSSMADGVSQLVSPGLAQLFCTPVHILGLDLYNHPKASAAARLRVVQSSFLPAMFMRVCRIGVAFGVGGLGNTAIRKCLHDAV 747
GVL ARL SD AAA++AS++VSPFISIVDR+IIQSASG+MGMK+S+AQG RV+ TKPALF +RPDF+CTF LY ATYLAAN I+T+A E +RSDT+PKF+GTTA+NMPGSIAKDQALTK+FGVV AA+VPAASFALFT+RDVATMAAAFTLPTPMS K+Q DFGV+S MAD SQLVSPGL QLF TP SF+PA+ MRV RIGVAFGVGGLGNT+IR LH A+
Sbjct: 91 GVLAARLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEFSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSTKMQ-DFGVDSGMADVTSQLVSPGLVQLFSTP------------------------DSFMPAIAMRVARIGVAFGVGGLGNTSIRNKLHGAI 314
BLAST of mRNA_H-elongata_contig79869.15638.1 vs. uniprot
Match: A0A8K1CT18_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT18_PYTOL) HSP 1 Score: 200 bits (509), Expect = 4.900e-59 Identity = 116/246 (47.15%), Postives = 156/246 (63.41%), Query Frame = 1
Query: 16 RLASDIAAAAVASILVSPFISIVDRSIIQSASGTMGMKSSLAQGLRVMVTKPALFSSRPDFVCTFSLYAATYLAANWITTIASETARSDTLPKFVGTTAVNMPGSIAKDQALTKLFGVVNGAARVPAASFALFTMRDVATMAAAFTLPTPMSAKIQQDFGVNSSMADGVSQLVSPGLAQLFCTPVHILGLDLYNHPKASAAARLRVVQSSFLPAMFMRVCRIGVAFGVGGLGNTAIRKCLHDAVDL 753
RL D+AAAA AS+ VSPFI+IVDR+II++ASG + + Q + P F R +F F LY ATY +AN I T+ T + +PKFVGTTAVNM IAKD+A T++FGV+ AA P AS LF +RD T+AA+F P M+ ++Q+ V S + +SQLV P Q TP+H++GLDLYNH AS + RL VQ ++ ++F R+ RIG AFG+GG+GNT R+ L A+ L
Sbjct: 19 RLGVDVAAAATASLGVSPFIAIVDRAIIENASGARRLSDGVKQLSMEFLRHPLRFLHRREFRLVFGLYTATYASANSIETLCDATDTDNQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAA-FPLASVGLFAIRDSMTVAASFNAPKIMAQQLQEKAHVKPSTSATISQLVCPAAVQFVSTPLHLVGLDLYNHKGASMSQRLVFVQREYIKSVFARIARIGPAFGIGGVGNTYCRQRLRTALSL 263
BLAST of mRNA_H-elongata_contig79869.15638.1 vs. uniprot
Match: A0A5D6XW10_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW10_9STRA) HSP 1 Score: 199 bits (505), Expect = 2.260e-58 Identity = 113/250 (45.20%), Postives = 155/250 (62.00%), Query Frame = 1
Query: 1 GVLIARLASDIAAAAVASILVSPFISIVDRSIIQSASGTMGMKSSLAQGLRVMVTKPALFSSRPDFVCTFSLYAATYLAANWITTIASETARSDTLPKFVGTTAVNMPGSIAKDQALTKLFGVVNGAARVPAASFALFTMRDVATMAAAFTLPTPMSAKIQQDFGVNSSMADGVSQLVSPGLAQLFCTPVHILGLDLYNHPKASAAARLRVVQSSFLPAMFMRVCRIGVAFGVGGLGNTAIRKCLHDAVD 750
G+L RLA+D+ AAA AS V+PFI+IVDR+II++ASG + + + R +P F +F F LY ATY +AN ++ R +PKF TTAVNM IAKD+A ++FGVV +A P A+ LF +RD T+AA+F P ++ K+Q D GV+ + A +QL+ P L Q TP+H+LGLDLYNH A AAA LRVV+ +L + R+ RIG AFG+GG+GN R+ L A+D
Sbjct: 18 GLLTRRLAADVTAAATASFAVAPFITIVDRAIIENASGARPLGVGIRELARAFARRPLAFVRTREFAIVFGLYTATYASANATDSLCDFAERDSQMPKFAATTAVNMSLCIAKDRAFAQMFGVVAPSA-FPLAAVGLFAVRDSLTVAASFNAPKAVARKLQDDTGVDPARARTAAQLLCPALVQFVSTPLHLLGLDLYNHKGAGAAAHLRVVRREYLKSAIARIGRIGPAFGIGGIGNAHCRETLRAALD 266
BLAST of mRNA_H-elongata_contig79869.15638.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 193 bits (490), Expect = 5.800e-56 Identity = 105/240 (43.75%), Postives = 155/240 (64.58%), Query Frame = 1
Query: 16 RLASDIAAAAVASILVSPFISIVDRSIIQSASGTMGMKSSLAQGLRVMVTKPALFSSRPDFVCTFSLYAATYLAANWITTIASETARSDTLPKFVGTTAVNMPGSIAKDQALTKLFGVVNGAARVPAASFALFTMRDVATMAAAFTLPTPMSAKIQQDFGVNSSMADGVSQLVSPGLAQLFCTPVHILGLDLYNHPKASAAARLRVVQSSFLPAMFMRVCRIGVAFGVGGLGNTAIRKCL 735
L D+ +A AS +VSPFI+IVDRSIIQ+ASG M M S+ G++ +V +P +F RP+F+ F +Y+ATY AN + T P+F+ T+AVNM IAKD+A T++FG + +P +++ALFT+RD T+ A+F LP P+S +Q G++ + AD +Q+ P Q TP+H++GLDLYN+PK++A R + S + ++ R+ RIG AFG+GG+GNTA RK L
Sbjct: 36 HLGLDVLSAFGASFMVSPFITIVDRSIIQNASGVMQMGDSIRAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGS-SAPMALPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGL 273
BLAST of mRNA_H-elongata_contig79869.15638.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 191 bits (484), Expect = 2.610e-55 Identity = 110/240 (45.83%), Postives = 152/240 (63.33%), Query Frame = 1
Query: 16 RLASDIAAAAVASILVSPFISIVDRSIIQSASGTMGMKSSLAQGLRVMVTKPALFSSRPDFVCTFSLYAATYLAANWITTIASETARSDTLPKFVGTTAVNMPGSIAKDQALTKLFGVVNGAARVPAASFALFTMRDVATMAAAFTLPTPMSAKIQQDFGVNSSMADGVSQLVSPGLAQLFCTPVHILGLDLYNHPKASAAARLRVVQSSFLPAMFMRVCRIGVAFGVGGLGNTAIRKCL 735
RL D+AAA AS+ V+PFI+IVDR+II++ASG + L Q V P F + +F+ F LY+ATY++AN I T+ + + +PKF+GTTAVNM IAKD+A ++FGV+ AA P AS LF +RD T+AA+F P ++ K++ D + S A ++QLV P Q TP+H+LGLDLYN+ SAA R VQ +L ++F R+ RIG AFG+GG+GNT R L
Sbjct: 19 RLGIDLAAAMAASVSVAPFITIVDRAIIENASGARPLGVGLKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAA-FPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQL 257
BLAST of mRNA_H-elongata_contig79869.15638.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD) HSP 1 Score: 189 bits (481), Expect = 7.550e-55 Identity = 108/240 (45.00%), Postives = 150/240 (62.50%), Query Frame = 1
Query: 16 RLASDIAAAAVASILVSPFISIVDRSIIQSASGTMGMKSSLAQGLRVMVTKPALFSSRPDFVCTFSLYAATYLAANWITTIASETARSDTLPKFVGTTAVNMPGSIAKDQALTKLFGVVNGAARVPAASFALFTMRDVATMAAAFTLPTPMSAKIQQDFGVNSSMADGVSQLVSPGLAQLFCTPVHILGLDLYNHPKASAAARLRVVQSSFLPAMFMRVCRIGVAFGVGGLGNTAIRKCL 735
LA D+AAAA AS VSPFI+IVDR+II++ASG + + + + V P F + +F+ F LY +TY +AN I T+ + +PKF+GTTAVNM IAKD+A ++FGVV +A P + LF +RD T+ A+F P ++ K++ D GV S A ++QL+ P Q TP+H+LGLDLYN+ AS AAR R VQ +L + R+ RIG AFG+GG+GNT R+ L
Sbjct: 20 NLAIDLAAAAAASFAVSPFITIVDRAIIENASGARPLAVGIKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSA-FPIGAIGLFAIRDSLTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENL 258
BLAST of mRNA_H-elongata_contig79869.15638.1 vs. uniprot
Match: A0A2D4BK36_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK36_PYTIN) HSP 1 Score: 188 bits (477), Expect = 3.080e-54 Identity = 111/246 (45.12%), Postives = 153/246 (62.20%), Query Frame = 1
Query: 16 RLASDIAAAAVASILVSPFISIVDRSIIQSASGTMGMKSSLAQGLRVMVTKPALFSSRPDFVCTFSLYAATYLAANWITTIASETARSDTLPKFVGTTAVNMPGSIAKDQALTKLFGVVNGAARVPAASFALFTMRDVATMAAAFTLPTPMSAKIQQDFGVNSSMADGVSQLVSPGLAQLFCTPVHILGLDLYNHPKASAAARLRVVQSSFLPAMFMRVCRIGVAFGVGGLGNTAIRKCLHDAVDL 753
RL D AAA +AS+ VSPFI+IVDRSII++ASG + + L + + P F R +F F LY ATY +AN I T+ T + +PKFVGTTAVNM IAKD+A T++FGV+ AA P AS LF +RD T+AA+F P ++ ++++ + S A V+QL+ P + Q TP+H+LGLDLYNH A R+ VQ +L + R+ RIG AFGVGG+GNT R+ L ++ +
Sbjct: 20 RLGVDAAAAMIASLGVSPFITIVDRSIIENASGARQLTTGLKELSIDFLRHPLQFLRRREFRLVFGLYTATYASANAIDTLCDVTDTNSQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAA-FPLASIGLFAVRDALTVAASFNAPRVVAKELRERAQLEPSRASTVAQLLCPAVVQFVSTPLHLLGLDLYNHRTAMVRQRINFVQREYLKSAVARIGRIGPAFGVGGVGNTFCRERLRASLHV 264
BLAST of mRNA_H-elongata_contig79869.15638.1 vs. uniprot
Match: A0A507FR36_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FR36_9FUNG) HSP 1 Score: 179 bits (455), Expect = 5.700e-51 Identity = 101/240 (42.08%), Postives = 146/240 (60.83%), Query Frame = 1
Query: 19 LASDIAAAAVASILVSPFISIVDRSIIQSASGTMGMKSSLAQGLRVMVTKPALFSSRPDFVCTFSLYAATYLAANWITTIASETARSDTLPKFVGTTAVNMPGSIAKDQALTKLFGVVNGAAR-VPAASFALFTMRDVATMAAAFTLPTPMSAKIQQDFGVNSSMADGVSQLVSPGLAQLFCTPVHILGLDLYNHPKASAAARLRVVQSSFLPAMFMRVCRIGVAFGVGGLGNTAIRKCL 735
L+ D AA S VSPF++I+DRSII +ASG M + + LA G R + T+P++ + +P + FS+YA TY+ AN TIA T LPKF+ ++ VN+ + KD+ LT + G AR P +S+ LF +RD T+AA+F+LP +SA +Q + ++ + D +SQL P + Q TP+H+ GLD YNHP A+ R++VV+ F+PA R+ RI AFG GGL N R L
Sbjct: 21 LSIDCVAALATSAAVSPFVAIIDRSIISNASGRMPLMAGLADGFRTLATRPSVLARQPSVLAVFSVYAITYITANSSETIALSTNSDPLLPKFIASSTVNIAACVYKDKLLTHWCSL--GPARPFPMSSYGLFGLRDSLTVAASFSLPPFLSAALQSNSSLSKTSCDSISQLALPCMVQFISTPIHLFGLDYYNHPSATVMQRVQVVKRDFIPATLARMGRILPAFGFGGLVNNKTRSTL 258
BLAST of mRNA_H-elongata_contig79869.15638.1 vs. uniprot
Match: A0A397IN71_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IN71_9GLOM) HSP 1 Score: 180 bits (457), Expect = 5.860e-51 Identity = 107/247 (43.32%), Postives = 151/247 (61.13%), Query Frame = 1
Query: 16 RLASDIAAAAVASILVSPFISIVDRSIIQSASGTMGMKSSLAQGLRVMVTKPALFSSRPDFVCTFSLYAATYLAANWITTIASETARSDTLPKFVGTTAVNMPGSIAKDQALTKLFGVVNGAARVPAASFALFTMRDVATMAAAFTLPTPMSAKIQQDFGV--NSSMADGVSQLVSPGLAQLFCTPVHILGLDLYNHPKASAAARLRVVQSSFLPAMFMRVCRIGVAFGVGGLGNTAIRKCLHDAVD 750
RL DI AA+ A+ VSPFI+IVDRSII++ASG + +L QG + T+P F P F F +YAATY AN I TI + T + + PKF+GTT NM I KD+A T++FG+V +P +S+ F RD T+AA+F +P P AK QD + +S + V+QL+ P Q +H+LGLD+YN P S +RL+ +Q ++L R+ RIG AFG+GG+GN IR+ +++ VD
Sbjct: 13 RLGVDIFAASTAAFGVSPFIAIVDRSIIENASGREKLGKALKQGFIHLFTRPFNFIRSPSFFLVFGVYAATYSTANTIDTICAYTKQDNQTPKFLGTTIANMTTCIYKDRAFTRMFGLV-APKGLPWSSYGYFAARDALTIAASFNIP-PTLAKEFQDRKIILDSETSQNVAQLICPAAVQFISCALHLLGLDIYNRPGESMLSRLQFLQRTYLKTTITRIARIGPAFGIGGVGNRVIRERVNEMVD 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79869.15638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79869.15638.1 >prot_H-elongata_contig79869.15638.1 ID=prot_H-elongata_contig79869.15638.1|Name=mRNA_H-elongata_contig79869.15638.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=225bp MGMKSSLAQGLRVMVTKPALFSSRPDFVCTFSLYAATYLAANWITTIASEback to top mRNA from alignment at H-elongata_contig79869:746..2563+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79869.15638.1 ID=mRNA_H-elongata_contig79869.15638.1|Name=mRNA_H-elongata_contig79869.15638.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1818bp|location=Sequence derived from alignment at H-elongata_contig79869:746..2563+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79869:746..2563+ >mRNA_H-elongata_contig79869.15638.1 ID=mRNA_H-elongata_contig79869.15638.1|Name=mRNA_H-elongata_contig79869.15638.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1350bp|location=Sequence derived from alignment at H-elongata_contig79869:746..2563+ (Himanthalia elongata Himel1 dioecious)back to top |