prot_H-elongata_contig12026.1563.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12026.1563.1
Unique Nameprot_H-elongata_contig12026.1563.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length200
Homology
BLAST of mRNA_H-elongata_contig12026.1563.1 vs. uniprot
Match: D7G4V8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V8_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 4.300e-33
Identity = 70/95 (73.68%), Postives = 84/95 (88.42%), Query Frame = 0
Query:    1 METREFDGGLLVVRKSELEHRRSTERLDLHRRQLKSCPLIRGGSRLRLLNYQNNLINKITNLANLPNLIFLDLYNNLIDTLEGPLSSMSGLRVVM 95
            +E REF GG+L+VR+SE   +RS ERL+LHRR L SCP+I+G +RLRLLNYQNNLI KITNLANLPNLIF+DLYNN+IDTLEGPLS+M+ LRV+M
Sbjct:   78 VEVREFQGGVLLVRRSEDAKKRSPERLNLHRRWLTSCPIIQGDNRLRLLNYQNNLITKITNLANLPNLIFIDLYNNVIDTLEGPLSTMTALRVMM 172          
BLAST of mRNA_H-elongata_contig12026.1563.1 vs. uniprot
Match: A0A6H5JFV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV0_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 8.010e-33
Identity = 69/95 (72.63%), Postives = 86/95 (90.53%), Query Frame = 0
Query:    1 METREFDGGLLVVRKSELEHRRSTERLDLHRRQLKSCPLIRGGSRLRLLNYQNNLINKITNLANLPNLIFLDLYNNLIDTLEGPLSSMSGLRVVM 95
            +E REF GG+L+VR+SE   +RS ERL+LHRR+L SCP+I+G +RLRLLNYQNNLI+KITNLANLPNLIF+DLYNN+I+TLEGPLS+M+ LRV+M
Sbjct:   78 VEVREFHGGVLLVRRSEDAKKRSPERLNLHRRRLTSCPIIQGDNRLRLLNYQNNLISKITNLANLPNLIFIDLYNNVINTLEGPLSTMTALRVMM 172          
BLAST of mRNA_H-elongata_contig12026.1563.1 vs. uniprot
Match: A0A4Q3SRM7_9BACT (Uncharacterized protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4Q3SRM7_9BACT)

HSP 1 Score: 91.7 bits (226), Expect = 3.090e-18
Identity = 53/81 (65.43%), Postives = 60/81 (74.07%), Query Frame = 0
Query:   11 LVVRKSELEHRRSTERLDLHRRQLKSCPLIRGGSRLRLLNYQNNLINKITNLANLPNLIFLDLYNNLIDTLEGPLSSMSGL 91
            LVV ++  E  R+ ERL+L RRQL+ CPL+    RLRLLNYQNN I  ITNL NLPNLIFLDLYNN I TLEGPL  + GL
Sbjct:  170 LVVFRTAEERLRNPERLNLDRRQLEFCPLLEQEQRLRLLNYQNNNIKYITNLENLPNLIFLDLYNNKIITLEGPLCQVRGL 250          
BLAST of mRNA_H-elongata_contig12026.1563.1 vs. uniprot
Match: A0A7S2F339_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F339_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.550e-14
Identity = 45/84 (53.57%), Postives = 55/84 (65.48%), Query Frame = 0
Query:   12 VVRKSELEHRRSTERLDLHRRQLKSCPLIRGGSRLRLLNYQNNLINKITNLANLPNLIFLDLYNNLIDTLEGPLSSMSGLRVVM 95
            VV +S  E     ERL L RR L  CP+++   R+RLLNYQNN I +I  L NLPNLIFLDLYNN I+ +   LS +  LRV+M
Sbjct:   16 VVFRSNSERTNDPERLTLERRGLVCCPVLKLEDRVRLLNYQNNFIERIDALRNLPNLIFLDLYNNCIEEMSDELSFVPTLRVLM 99          
BLAST of mRNA_H-elongata_contig12026.1563.1 vs. uniprot
Match: F0YI54_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI54_AURAN)

HSP 1 Score: 80.1 bits (196), Expect = 5.380e-14
Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 0
Query:   11 LVVRKSELEHRRSTERLDLHRRQLKSCPLIRGGSRLRLLNYQNNLINKITNLANLPNLIFLDLYNNLIDTLEGPLSSMSGLRVVM 95
            LVV +S  E   + ERL+L RR L  CP+++   R+RLLNYQNN I +I +L++LPNLIFLDLYNN I++L   L  +  LRV+M
Sbjct:  308 LVVYRSPEERAANPERLNLDRRHLTVCPILKSEERVRLLNYQNNYIEEIRHLSHLPNLIFLDLYNNCIESLSRDLECVPTLRVLM 392          
BLAST of mRNA_H-elongata_contig12026.1563.1 vs. uniprot
Match: A0A1R2CZ17_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CZ17_9CILI)

HSP 1 Score: 79.7 bits (195), Expect = 6.820e-14
Identity = 45/75 (60.00%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    9 GLLVVRKSELEHRRSTERLDLHRRQLKSCPLIRGGSRLRLLNYQNNLINKITNLANLPNLIFLDLYNNLIDTLEG 83
            G+LVV +S  E   + ERL+L RR L   PL+ G  RLRLLNYQ+NLI+KI NL +LPNLIFLDLYNN I  + G
Sbjct:   98 GVLVVYRSPSERNTNPERLNLDRRDLTQMPLLEGEERLRLLNYQHNLISKIENLLSLPNLIFLDLYNNQIREING 172          
BLAST of mRNA_H-elongata_contig12026.1563.1 vs. uniprot
Match: A0A8J2SSU8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSU8_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.310e-14
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    9 GLLVVRKSELEHRRSTERLDLHRRQLKSCPLIRGGSRLRLLNYQNNLINKITNLANLPNLIFLDLYNNLIDTLEGPLSSMSGLRVVM 95
            G LVV +S  E   + ERL+L RR+L  CP+++   ++RLLNYQ+N I +I NL +LPNLIFLDLYNN I+ L   L  +  LRV+M
Sbjct:  199 GALVVYRSPEERAANPERLNLDRRRLTVCPILKSEEQVRLLNYQSNYIKEIQNLVHLPNLIFLDLYNNRIENLSHDLGCVPTLRVLM 285          
BLAST of mRNA_H-elongata_contig12026.1563.1 vs. uniprot
Match: A0A7S4EZI9_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EZI9_CHRCT)

HSP 1 Score: 76.3 bits (186), Expect = 1.040e-12
Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    8 GGLLVVRKSELEHRRSTERLDLHRRQLKSCPLIRGGSRLRLLNYQNNLINKITNLANLPNLIFLDLYNNLIDTLEG 83
            GG+  V +S  E   + ERL+L RR L++CP++ G  RLRLLNYQNN I+ I+NL NLP+LIFLD+Y+N I  + G
Sbjct:  192 GGVPTVLRSTAEKLANPERLNLDRRSLEACPVLEGEERLRLLNYQNNSISSISNLHNLPHLIFLDMYSNQIKEIAG 267          
BLAST of mRNA_H-elongata_contig12026.1563.1 vs. uniprot
Match: A0A1R2C674_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C674_9CILI)

HSP 1 Score: 75.5 bits (184), Expect = 1.980e-12
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    9 GLLVVRKSELEHRRSTERLDLHRRQLKSCPLIRGGSRLRLLNYQNNLINKITNLANLPNLIFLDLYNNLI 78
            G+LVV +   E   + ERL+L RR+L   PL+ G  RLRLLNYQ+N I+KI NL +LPNLIFLDLYNN I
Sbjct:  103 GVLVVYRKPSERNSNPERLNLDRRELTQMPLLEGEERLRLLNYQHNFISKIENLLSLPNLIFLDLYNNQI 172          
BLAST of mRNA_H-elongata_contig12026.1563.1 vs. uniprot
Match: A0A7S4N260_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4N260_GUITH)

HSP 1 Score: 74.3 bits (181), Expect = 5.150e-12
Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    7 DGGLLVVRKSELEHRRSTERLDLHRRQLKSCPLIRGGSRLRLLNYQNNLINKITNLANLPNLIFLD 72
            +GG LV+ +S+ E   + ERL+L RR+L  CP++ G  +LRLLNYQNNLI+K+ NL NLPNLIFLD
Sbjct:  210 NGGQLVINRSKEEKFSNPERLNLDRRKLTCCPVLEGEEKLRLLNYQNNLISKVENLDNLPNLIFLD 275          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12026.1563.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4V8_ECTSI4.300e-3373.68Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JFV0_9PHAE8.010e-3372.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4Q3SRM7_9BACT3.090e-1865.43Uncharacterized protein n=1 Tax=Chitinophagaceae b... [more]
A0A7S2F339_9STRA2.550e-1453.57Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
F0YI54_AURAN5.380e-1452.94Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A1R2CZ17_9CILI6.820e-1460.00Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A8J2SSU8_9STRA7.310e-1451.72Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4EZI9_CHRCT1.040e-1253.95Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A1R2C674_9CILI1.980e-1260.00Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A7S4N260_GUITH5.150e-1259.09Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 110..131
e-value: 43.0
score: 8.0
coord: 65..88
e-value: 42.0
score: 8.1
coord: 176..197
e-value: 12.0
score: 12.6
coord: 132..155
e-value: 6.3
score: 14.9
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 65..87
e-value: 380.0
score: 2.7
coord: 88..109
e-value: 23.0
score: 12.6
coord: 132..153
e-value: 14.0
score: 14.5
coord: 154..175
e-value: 33.0
score: 11.4
coord: 110..131
e-value: 33.0
score: 11.4
coord: 176..197
e-value: 26.0
score: 12.2
NoneNo IPR availablePANTHERPTHR45973FAMILY NOT NAMEDcoord: 21..198
NoneNo IPR availablePANTHERPTHR45973:SF8LEUCINE RICH REPEAT CONTAINING 49coord: 21..198
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 20..193
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 11..199
e-value: 1.0E-34
score: 121.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 90..145
e-value: 4.9E-10
score: 39.0
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 45..66
score: 7.881
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 112..133
score: 8.082
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 67..88
score: 6.803
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 178..199
score: 6.903
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 134..155
score: 7.797
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 156..177
score: 7.288
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 90..111
score: 6.796

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12026contigH-elongata_contig12026:1..1877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12026.1563.1mRNA_H-elongata_contig12026.1563.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12026 1..1898 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12026.1563.1 ID=prot_H-elongata_contig12026.1563.1|Name=mRNA_H-elongata_contig12026.1563.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=200bp
METREFDGGLLVVRKSELEHRRSTERLDLHRRQLKSCPLIRGGSRLRLLN
YQNNLINKITNLANLPNLIFLDLYNNLIDTLEGPLSSMSGLRVVMLGKNR
IEKVSNIENLRKLDVLDLHSNVIRDMEGFDGLPELRVLNLAGNRLRIVEN
VSCLTALTELNLRRNIIEKVMELDVLPRLQRLFLSNNRIKSFDDCRCIFS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt