prot_H-elongata_contig79711.15626.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79711.15626.1
Unique Nameprot_H-elongata_contig79711.15626.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length37
Homology
BLAST of mRNA_H-elongata_contig79711.15626.1 vs. uniprot
Match: A0A6H5KEF6_9PHAE (2-isopropylmalate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF6_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.080e-11
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 0
Query:    1 MTKEEKLVVAKQLSKLGVDIIEAGFPIASQGDFE 34
            MT+EEKL+VAKQLSKLGVDIIEAGFPIASQGDFE
Sbjct:  145 MTREEKLMVAKQLSKLGVDIIEAGFPIASQGDFE 178          
BLAST of mRNA_H-elongata_contig79711.15626.1 vs. uniprot
Match: D8LHU2_ECTSI (2-isopropylmalate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU2_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 7.300e-11
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0
Query:    1 MTKEEKLVVAKQLSKLGVDIIEAGFPIASQGDFE 34
            MT+EEKL+VAKQL KLGVDIIEAGFPIASQGDFE
Sbjct:    1 MTREEKLMVAKQLGKLGVDIIEAGFPIASQGDFE 34          
BLAST of mRNA_H-elongata_contig79711.15626.1 vs. uniprot
Match: A0A835YKD7_9STRA (2-isopropylmalate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD7_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.860e-10
Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 0
Query:    1 MTKEEKLVVAKQLSKLGVDIIEAGFPIASQGDFE 34
            MT+EEKLVVA+QLSKLGVD+IEAGFPIAS GDFE
Sbjct:   58 MTREEKLVVARQLSKLGVDVIEAGFPIASPGDFE 91          
BLAST of mRNA_H-elongata_contig79711.15626.1 vs. uniprot
Match: A0A7S0G0R3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G0R3_9RHOD)

HSP 1 Score: 58.2 bits (139), Expect = 1.380e-9
Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 MTKEEKLVVAKQLSKLGVDIIEAGFPIASQGDFE 34
            +T EEKL++AKQL+KLGVDIIEAGFP+AS GDFE
Sbjct:  100 LTGEEKLILAKQLAKLGVDIIEAGFPVASVGDFE 133          
BLAST of mRNA_H-elongata_contig79711.15626.1 vs. uniprot
Match: A0A7S2ZW89_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZW89_9RHOD)

HSP 1 Score: 58.5 bits (140), Expect = 1.870e-9
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 MTKEEKLVVAKQLSKLGVDIIEAGFPIASQGDFE 34
            +T EEKL++AKQL+KLGVDIIEAGFPIAS GDFE
Sbjct:   99 LTGEEKLILAKQLAKLGVDIIEAGFPIASVGDFE 132          
BLAST of mRNA_H-elongata_contig79711.15626.1 vs. uniprot
Match: A0A7C3A057_9BACT (2-isopropylmalate synthase (Fragment) n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3A057_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 2.400e-9
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MTKEEKLVVAKQLSKLGVDIIEAGFPIASQGDFE 34
            MTKEEK+ +AKQL KL VD+IEAGFP ASQGDFE
Sbjct:   23 MTKEEKVRIAKQLEKLRVDVIEAGFPAASQGDFE 56          
BLAST of mRNA_H-elongata_contig79711.15626.1 vs. uniprot
Match: M2XVI5_GALSU (2-isopropylmalate synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XVI5_GALSU)

HSP 1 Score: 58.9 bits (141), Expect = 4.230e-9
Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 MTKEEKLVVAKQLSKLGVDIIEAGFPIASQGDFE 34
            +T EEKLV+A+QL+KLGVDIIEAGFP+AS GDFE
Sbjct:  150 LTGEEKLVIARQLAKLGVDIIEAGFPVASNGDFE 183          
BLAST of mRNA_H-elongata_contig79711.15626.1 vs. uniprot
Match: A0A0T5Z7V0_9GAMM (HMGL-like (Fragment) n=1 Tax=endosymbiont of Ridgeia piscesae TaxID=54398 RepID=A0A0T5Z7V0_9GAMM)

HSP 1 Score: 56.2 bits (134), Expect = 4.720e-9
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MTKEEKLVVAKQLSKLGVDIIEAGFPIASQGDFE 34
            MTKEEK+ +AK L KL VD+IEAGFPIASQGDFE
Sbjct:   25 MTKEEKVRIAKALEKLRVDVIEAGFPIASQGDFE 58          
BLAST of mRNA_H-elongata_contig79711.15626.1 vs. uniprot
Match: K8YXP2_NANGC (2-isopropylmalate synthase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YXP2_NANGC)

HSP 1 Score: 58.2 bits (139), Expect = 4.820e-9
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MTKEEKLVVAKQLSKLGVDIIEAGFPIASQGDFE 34
            MT EEKL VAKQL+KLGVD+IEAGFPIAS GDF+
Sbjct:   58 MTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFD 91          
BLAST of mRNA_H-elongata_contig79711.15626.1 vs. uniprot
Match: A0A7S2ZV85_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZV85_9RHOD)

HSP 1 Score: 58.5 bits (140), Expect = 5.600e-9
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 MTKEEKLVVAKQLSKLGVDIIEAGFPIASQGDFE 34
            +T EEKL++AKQL+KLGVDIIEAGFPIAS GDFE
Sbjct:   99 LTGEEKLILAKQLAKLGVDIIEAGFPIASVGDFE 132          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79711.15626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEF6_9PHAE2.080e-1194.122-isopropylmalate synthase n=1 Tax=Ectocarpus sp. ... [more]
D8LHU2_ECTSI7.300e-1191.182-isopropylmalate synthase n=1 Tax=Ectocarpus sili... [more]
A0A835YKD7_9STRA1.860e-1088.242-isopropylmalate synthase n=1 Tax=Tribonema minus... [more]
A0A7S0G0R3_9RHOD1.380e-979.41Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S2ZW89_9RHOD1.870e-982.35Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7C3A057_9BACT2.400e-979.412-isopropylmalate synthase (Fragment) n=1 Tax=Cand... [more]
M2XVI5_GALSU4.230e-979.412-isopropylmalate synthase n=1 Tax=Galdieria sulph... [more]
A0A0T5Z7V0_9GAMM4.720e-979.41HMGL-like (Fragment) n=1 Tax=endosymbiont of Ridge... [more]
K8YXP2_NANGC4.820e-982.352-isopropylmalate synthase n=1 Tax=Nannochloropsis... [more]
A0A7S2ZV85_9RHOD5.600e-982.35Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..36
e-value: 8.6E-11
score: 43.4
IPR000891Pyruvate carboxyltransferasePFAMPF00682HMGL-likecoord: 1..35
e-value: 3.0E-8
score: 33.5
NoneNo IPR availablePANTHERPTHR10277:SF612-ISOPROPYLMALATE SYNTHASE 1, CHLOROPLASTIC-RELATEDcoord: 1..34
NoneNo IPR availablePANTHERPTHR10277HOMOCITRATE SYNTHASE-RELATEDcoord: 1..34
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 1..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79711contigH-elongata_contig79711:334..1400 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79711.15626.1mRNA_H-elongata_contig79711.15626.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79711 316..1400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79711.15626.1 ID=prot_H-elongata_contig79711.15626.1|Name=mRNA_H-elongata_contig79711.15626.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=37bp
MTKEEKLVVAKQLSKLGVDIIEAGFPIASQGDFEVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR000891PYR_CT