mRNA_H-elongata_contig79256.15586.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79256.15586.1 vs. uniprot
Match: D8LKJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ0_ECTSI) HSP 1 Score: 140 bits (353), Expect = 6.690e-41 Identity = 70/80 (87.50%), Postives = 77/80 (96.25%), Query Frame = 1
Query: 1 FAAVFDLVDKDGGGTVTKEELGELMETLGIEATPEEVDLMVDEIDQNNNGEIDFEEFVAVMSRKVSASYTSDQVKDAFKV 240
F +FDLVD+DGGGTVTKEELGELM+TLGIEATPEEVDLM+DEIDQ+NNGEIDFEEFVAVMSRKV+ASYT+DQVK AFKV
Sbjct: 18 FREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKV 97
BLAST of mRNA_H-elongata_contig79256.15586.1 vs. uniprot
Match: F0YC57_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC57_AURAN) HSP 1 Score: 134 bits (337), Expect = 1.560e-38 Identity = 65/80 (81.25%), Postives = 77/80 (96.25%), Query Frame = 1
Query: 1 FAAVFDLVDKDGGGTVTKEELGELMETLGIEATPEEVDLMVDEIDQNNNGEIDFEEFVAVMSRKVSASYTSDQVKDAFKV 240
F +F+LVD+DGGGT+TKEELGELM+TLGI+ATPEE+DLM+ EIDQ+NNGEIDFEEFVAVMSRKVSA+YT+DQVK+AFKV
Sbjct: 13 FREIFNLVDRDGGGTITKEELGELMDTLGIDATPEEIDLMIHEIDQDNNGEIDFEEFVAVMSRKVSATYTADQVKNAFKV 92
BLAST of mRNA_H-elongata_contig79256.15586.1 vs. uniprot
Match: A0A6V1LFC1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LFC1_HETAK) HSP 1 Score: 126 bits (316), Expect = 3.630e-35 Identity = 59/80 (73.75%), Postives = 77/80 (96.25%), Query Frame = 1
Query: 1 FAAVFDLVDKDGGGTVTKEELGELMETLGIEATPEEVDLMVDEIDQNNNGEIDFEEFVAVMSRKVSASYTSDQVKDAFKV 240
F +F+LVD+DGGG++TKEELG+LM+TLGI+A+PEE+DLM++EIDQ+NNGEIDF EFVAVMSRKV+A+YTS+QVK+AF+V
Sbjct: 27 FREIFNLVDRDGGGSITKEELGDLMDTLGIDASPEEIDLMINEIDQDNNGEIDFNEFVAVMSRKVNATYTSEQVKNAFRV 106
BLAST of mRNA_H-elongata_contig79256.15586.1 vs. uniprot
Match: A0A8J2SL49_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL49_9STRA) HSP 1 Score: 125 bits (313), Expect = 7.120e-35 Identity = 60/80 (75.00%), Postives = 75/80 (93.75%), Query Frame = 1
Query: 1 FAAVFDLVDKDGGGTVTKEELGELMETLGIEATPEEVDLMVDEIDQNNNGEIDFEEFVAVMSRKVSASYTSDQVKDAFKV 240
F +F+LVDKDGGGT++KEELGELMETLGI+ATPEE+DLM+ EID++NNG IDF+EFVAVMSRKVSA+YT++QV+ AF+V
Sbjct: 13 FREIFNLVDKDGGGTISKEELGELMETLGIDATPEEIDLMIAEIDEDNNGVIDFDEFVAVMSRKVSATYTAEQVRGAFRV 92
BLAST of mRNA_H-elongata_contig79256.15586.1 vs. uniprot
Match: A0A835YUG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG4_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.040e-33 Identity = 61/80 (76.25%), Postives = 72/80 (90.00%), Query Frame = 1
Query: 1 FAAVFDLVDKDGGGTVTKEELGELMETLGIEATPEEVDLMVDEIDQNNNGEIDFEEFVAVMSRKVSASYTSDQVKDAFKV 240
F +F LVD+DGGGT+TK ELG+LM+TLGIEAT EE++LMV EIDQ+NNGEIDF+EFVAVMSRKV+ASYT +QVK AFKV
Sbjct: 21 FREIFSLVDRDGGGTITKVELGDLMDTLGIEATAEEIELMVAEIDQDNNGEIDFQEFVAVMSRKVNASYTPEQVKGAFKV 100
BLAST of mRNA_H-elongata_contig79256.15586.1 vs. uniprot
Match: K3X6Z4_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X6Z4_GLOUD) HSP 1 Score: 117 bits (294), Expect = 3.150e-32 Identity = 56/79 (70.89%), Postives = 73/79 (92.41%), Query Frame = 1
Query: 1 FAAVFDLVDKDGGGTVTKEELGELMETLGIEATPEEVDLMVDEIDQNNNGEIDFEEFVAVMSRKVSASYTSDQVKDAFK 237
F +F+LVD+D GG++TK ELGELM+TLGI+ +PEE+DLM+ EIDQ++NGEIDF+EFVAVMSRKV+A+YTS+QVK+AFK
Sbjct: 13 FREIFNLVDRDRGGSITKVELGELMDTLGIDTSPEEIDLMIHEIDQDSNGEIDFDEFVAVMSRKVNATYTSEQVKNAFK 91
BLAST of mRNA_H-elongata_contig79256.15586.1 vs. uniprot
Match: A0A812VHE1_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VHE1_SYMMI) HSP 1 Score: 117 bits (293), Expect = 3.540e-32 Identity = 55/80 (68.75%), Postives = 74/80 (92.50%), Query Frame = 1
Query: 1 FAAVFDLVDKDGGGTVTKEELGELMETLGIEATPEEVDLMVDEIDQNNNGEIDFEEFVAVMSRKVSASYTSDQVKDAFKV 240
F +F+LVD+DGGG++TKEELGELM+TLGI+A+PEE++ M++EID + +GEIDFEEFV VMSRKV+A+YT+DQVK+AF+V
Sbjct: 13 FREIFNLVDRDGGGSITKEELGELMDTLGIDASPEELETMINEIDSSGDGEIDFEEFVEVMSRKVNATYTADQVKNAFRV 92
BLAST of mRNA_H-elongata_contig79256.15586.1 vs. uniprot
Match: A0A7S3H4J2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4J2_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.860e-32 Identity = 57/80 (71.25%), Postives = 71/80 (88.75%), Query Frame = 1
Query: 1 FAAVFDLVDKDGGGTVTKEELGELMETLGIEATPEEVDLMVDEIDQNNNGEIDFEEFVAVMSRKVSASYTSDQVKDAFKV 240
F +F+LVDKDGGG++TK EL +LM+TLGI+A+PEE+D M+ EIDQ+ NG+IDFEEFV VMSRKV+A+YTSDQVK AFKV
Sbjct: 9 FREIFNLVDKDGGGSITKVELADLMDTLGIDASPEEIDAMIFEIDQDGNGDIDFEEFVTVMSRKVNATYTSDQVKGAFKV 88
BLAST of mRNA_H-elongata_contig79256.15586.1 vs. uniprot
Match: H3H091_PHYRM (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=H3H091_PHYRM) HSP 1 Score: 117 bits (294), Expect = 5.460e-32 Identity = 56/79 (70.89%), Postives = 73/79 (92.41%), Query Frame = 1
Query: 1 FAAVFDLVDKDGGGTVTKEELGELMETLGIEATPEEVDLMVDEIDQNNNGEIDFEEFVAVMSRKVSASYTSDQVKDAFK 237
F +F+LVD+D GG++TK ELGELM+TLGI+ +PEE+DLM++EIDQ++NGEIDF+EFVAVMSRKV+A+YTS+QVK AFK
Sbjct: 13 FREIFNLVDRDRGGSITKVELGELMDTLGIDTSPEEIDLMINEIDQDSNGEIDFDEFVAVMSRKVNATYTSEQVKTAFK 91
BLAST of mRNA_H-elongata_contig79256.15586.1 vs. uniprot
Match: A0A7S1GDX7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDX7_9STRA) HSP 1 Score: 118 bits (295), Expect = 5.720e-32 Identity = 57/80 (71.25%), Postives = 73/80 (91.25%), Query Frame = 1
Query: 1 FAAVFDLVDKDGGGTVTKEELGELMETLGIEATPEEVDLMVDEIDQNNNGEIDFEEFVAVMSRKVSASYTSDQVKDAFKV 240
F +F+LVDKDGGGT++K+EL ELMETLGI A+PEEV+LM++E+D++ +GEIDFEEFVAVMSRKV++SYT DQVK AFK+
Sbjct: 28 FREIFNLVDKDGGGTISKDELLELMETLGINASPEEVELMINEVDEDQSGEIDFEEFVAVMSRKVNSSYTPDQVKAAFKI 107 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79256.15586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79256.15586.1 >prot_H-elongata_contig79256.15586.1 ID=prot_H-elongata_contig79256.15586.1|Name=mRNA_H-elongata_contig79256.15586.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp FAAVFDLVDKDGGGTVTKEELGELMETLGIEATPEEVDLMVDEIDQNNNGback to top mRNA from alignment at H-elongata_contig79256:2076..2806+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79256.15586.1 ID=mRNA_H-elongata_contig79256.15586.1|Name=mRNA_H-elongata_contig79256.15586.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=731bp|location=Sequence derived from alignment at H-elongata_contig79256:2076..2806+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79256:2076..2806+ >mRNA_H-elongata_contig79256.15586.1 ID=mRNA_H-elongata_contig79256.15586.1|Name=mRNA_H-elongata_contig79256.15586.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=522bp|location=Sequence derived from alignment at H-elongata_contig79256:2076..2806+ (Himanthalia elongata Himel1 dioecious)back to top |