prot_H-elongata_contig120150.1556.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig120150.1556.1
Unique Nameprot_H-elongata_contig120150.1556.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length54
Homology
BLAST of mRNA_H-elongata_contig120150.1556.1 vs. uniprot
Match: A0A6H5KI29_9PHAE (RanBD1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI29_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 1.670e-25
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 0
Query:    1 QIICNHVADPRIVLKLNAGSDRSWVWNAFDFTGGELEETTFALRFGNSDTAKEF 54
            ++ICNHVADPRIVLK NAGSDRSWVWNAFDFT G+LEE TFALRFGNSD+A EF
Sbjct:  128 KVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEMTFALRFGNSDSANEF 181          
BLAST of mRNA_H-elongata_contig120150.1556.1 vs. uniprot
Match: D8LNF2_ECTSI (RanBD1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF2_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 4.400e-24
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 0
Query:    1 QIICNHVADPRIVLKLNAGSDRSWVWNAFDFTGGELEETTFALRFGNSDTAKEF 54
            ++ICNHVADPRIVLK NAGSDRSWVWNAFDFT G+LEE TFALRFGNSD+A EF
Sbjct:  305 KVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEMTFALRFGNSDSANEF 358          
BLAST of mRNA_H-elongata_contig120150.1556.1 vs. uniprot
Match: A0A8J2T1Z3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1Z3_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.400e-20
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 0
Query:    1 QIICNHVADPRIVLKLNAGSDRSWVWNAFDFTGGELEETTFALRFGNSDTAKEF 54
            +IICNHV DPRI L+ N GSDRSWVW+A+DF+ GELE+T FA+RFGNSD AKE+
Sbjct:  174 KIICNHVVDPRIELEPNVGSDRSWVWSAWDFSSGELEDTIFAIRFGNSDGAKEY 227          
BLAST of mRNA_H-elongata_contig120150.1556.1 vs. uniprot
Match: A0A7S2XZR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZR9_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.630e-20
Identity = 37/54 (68.52%), Postives = 47/54 (87.04%), Query Frame = 0
Query:    1 QIICNHVADPRIVLKLNAGSDRSWVWNAFDFTGGELEETTFALRFGNSDTAKEF 54
            ++ICNHV DPRI +++NAGSDRSWVW+AFDF+ GEL ET FA+RF NSD A++F
Sbjct:  148 KVICNHVVDPRIQMQMNAGSDRSWVWSAFDFSDGELVETVFAIRFANSDIAQDF 201          
BLAST of mRNA_H-elongata_contig120150.1556.1 vs. uniprot
Match: A0A7S1VE37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VE37_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 4.400e-20
Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 QIICNHVADPRIVLKLNAGSDRSWVWNAFDFTGGELEETTFALRFGNSDTAKEF 54
            ++ICNHV DPRI L+ N GSDRSWVW+AFDF  G+L+ET FA+RF +SD AKEF
Sbjct:  102 KVICNHVLDPRITLEPNVGSDRSWVWSAFDFAEGDLKETVFAIRFSSSDVAKEF 155          
BLAST of mRNA_H-elongata_contig120150.1556.1 vs. uniprot
Match: B7FP98_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FP98_PHATC)

HSP 1 Score: 86.3 bits (212), Expect = 1.640e-19
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 QIICNHVADPRIVLKLNAGSDRSWVWNAFDFTGGELEETTFALRFGNSDTAKEF 54
            ++I NH  DPR VLK NAG+DRSWVW+AFDF GGEL ET FA+RFG+SD A EF
Sbjct:  113 KVIANHALDPRCVLKPNAGNDRSWVWSAFDFAGGELVETVFAIRFGDSDKALEF 166          
BLAST of mRNA_H-elongata_contig120150.1556.1 vs. uniprot
Match: A0A1Z5JQI1_FISSO (RanBD1 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQI1_FISSO)

HSP 1 Score: 83.2 bits (204), Expect = 1.730e-19
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 QIICNHVADPRIVLKLNAGSDRSWVWNAFDFTGGELEETTFALRFGNSDTAKEF 54
            ++I NHV DP+I L+ N GSDRSWVW+AFDF  GEL+ET FA+RFG+SD A EF
Sbjct:    2 KVIANHVVDPKIKLEPNVGSDRSWVWSAFDFAEGELKETIFAIRFGDSDIANEF 55          
BLAST of mRNA_H-elongata_contig120150.1556.1 vs. uniprot
Match: A0A835YXP9_9STRA (RanBP1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP9_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.640e-19
Identity = 39/54 (72.22%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 QIICNHVADPRIVLKLNAGSDRSWVWNAFDFTGGELEETTFALRFGNSDTAKEF 54
            +II NHVADPRIVLK N GSDRSWVW A+DF   EL ET FA+RFG+SD A EF
Sbjct:  124 KIIANHVADPRIVLKPNLGSDRSWVWTAYDFVDNELVETVFAIRFGSSDAANEF 177          
BLAST of mRNA_H-elongata_contig120150.1556.1 vs. uniprot
Match: A0A7S3Q898_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q898_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.540e-19
Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 QIICNHVADPRIVLKLNAGSDRSWVWNAFDFTGGELEETTFALRFGNSDTAKEF 54
            ++I NH  DPRI+L  NAGSDRSWVW+AFDF  GEL+ET FALRF +S+ A EF
Sbjct:   11 KVITNHALDPRIILNPNAGSDRSWVWSAFDFAEGELKETVFALRFADSEIADEF 64          
BLAST of mRNA_H-elongata_contig120150.1556.1 vs. uniprot
Match: A0A1Z5JPA6_FISSO (Ran-binding protein 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPA6_FISSO)

HSP 1 Score: 83.2 bits (204), Expect = 2.130e-18
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 QIICNHVADPRIVLKLNAGSDRSWVWNAFDFTGGELEETTFALRFGNSDTAKEF 54
            ++I NHV DP+I L+ N GSDRSWVW+AFDF  GEL+ET FA+RFG+SD A EF
Sbjct:  108 KVIANHVVDPKIKLEPNVGSDRSWVWSAFDFAEGELKETIFAIRFGDSDIANEF 161          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120150.1556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI29_9PHAE1.670e-2585.19RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LNF2_ECTSI4.400e-2485.19RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A8J2T1Z3_9STRA1.400e-2072.22Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2XZR9_9STRA2.630e-2068.52Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1VE37_9STRA4.400e-2068.52Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
B7FP98_PHATC1.640e-1970.37Predicted protein n=4 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JQI1_FISSO1.730e-1966.67RanBD1 domain-containing protein n=1 Tax=Fistulife... [more]
A0A835YXP9_9STRA2.640e-1972.22RanBP1 domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S3Q898_9STRA7.540e-1966.67Hypothetical protein (Fragment) n=2 Tax=Chaetocero... [more]
A0A1Z5JPA6_FISSO2.130e-1866.67Ran-binding protein 1 n=1 Tax=Fistulifera solaris ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 2..54
e-value: 1.7E-9
score: 38.0
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 1..54
score: 10.003
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..54
e-value: 3.3E-10
score: 41.6
NoneNo IPR availablePANTHERPTHR23138RAN BINDING PROTEINcoord: 2..54
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 1..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120150contigH-elongata_contig120150:1301..1462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120150.1556.1mRNA_H-elongata_contig120150.1556.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig120150 1301..1462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig120150.1556.1 ID=prot_H-elongata_contig120150.1556.1|Name=mRNA_H-elongata_contig120150.1556.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=54bp
QIICNHVADPRIVLKLNAGSDRSWVWNAFDFTGGELEETTFALRFGNSDT
AKEF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH-like_dom_sf