prot_H-elongata_contig78317.15500.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78317.15500.1
Unique Nameprot_H-elongata_contig78317.15500.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length240
Homology
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BLAST of mRNA_H-elongata_contig78317.15500.1 vs. uniprot
Match: D8LNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW9_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 1.590e-88
Identity = 168/243 (69.14%), Postives = 189/243 (77.78%), Query Frame = 0 
Query:    1 MQLQDALWRDLPVLKDPVLQSLDRINVDRSLLDQEVRADMRIGAARLLADRS-NGDXXXXXXXXXXXXXXXTADSSGRSDAL-----GSNGPSSSSLPPDFLKTIESPLDSQLIARYTMLERKDKLMIGSRWVLVLGVLTHDSYLLLFDVPKGHSSHKKNLNARTSEVFAELVPKPGVDAMATEISKHKDGGKSLDVNGLPIPPSVAIDLSACQVHFKPDGKSDATFEITEIRPAKGVTGVFK 237
            +QLQDALWRDLP LK+PV+ +LDRINVDR LLDQEVR  MR+GAARLLA R  NG  XXXXXXXXXXXXXX A              G +   S ++P DFL  +ESPL S LIAR TMLER++K MI SRW+LVL +LTHDSYLLLFDVP+G ++HKK LNARTSE FAELVPKP V AMA E+ KHKDG K +D  GLP+PPSVAIDLSACQV FKPDGKSDATFEITEI+P +GV  VFK
Sbjct:  366 VQLQDALWRDLPALKEPVVHTLDRINVDRHLLDQEVRQQMRVGAARLLAGRQENGAGXXXXXXXXXXXXXXPAGXXXXXXXXXXXXGGGSVERSETMPADFLAGLESPLASSLIARSTMLERREKAMIASRWILVLAILTHDSYLLLFDVPRGTAAHKKQLNARTSEAFAELVPKPEVGAMAVELGKHKDG-KGVDSGGLPVPPSVAIDLSACQVSFKPDGKSDATFEITEIKPTRGVKTVFK 607
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BLAST of mRNA_H-elongata_contig78317.15500.1 vs. uniprot
Match: A0A6H5KEN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN9_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.300e-17
Identity = 74/116 (63.79%), Postives = 80/116 (68.97%), Query Frame = 0 
Query:    1 MQLQDALWRDLPVLKDPVLQSLDRINVDRSLLDQEVRADMRIGAARLLADR-----SNGDXXXXXXXXXXXXXXXTADSSGRSDALGSNGPS---SSSLPPDFLKTIESPLDSQLI 108
            +QLQDALWRDLP LKDPVL +LDRINVDR LLDQEVR  MR+GAARLLA R     S G XXXXXXXXXXXXXXX              G S   S ++PPDFL  +ESPL S LI
Sbjct:  408 VQLQDALWRDLPALKDPVLHTLDRINVDRHLLDQEVRQQMRVGAARLLAGRQENGASAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGSVERSETIPPDFLAGLESPLASSLI 523
[Close]
BLAST of mRNA_H-elongata_contig78317.15500.1 vs. uniprot
Match: A0A836CKX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKX7_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 6.200e-7
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 0 
Query:    1 MQLQDALWRDLPVLKDPVLQSLDRINVDRSLLDQEVRADMR-IGAARLLADRSNGD 55
            +Q QD +WR LP+LKDPVLQ L+RIN DR  LD EVR  MR + AA+L      G+
Sbjct:  306 LQAQDLVWRQLPILKDPVLQVLERINTDRRFLDGEVRDAMRTLSAAKLRTASKAGE 361
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78317.15500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LNW9_ECTSI1.590e-8869.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEN9_9PHAE1.300e-1763.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CKX7_9STRA6.200e-755.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78317contigH-elongata_contig78317:366..2407 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78317.15500.1mRNA_H-elongata_contig78317.15500.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78317 336..2407 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78317.15500.1 ID=prot_H-elongata_contig78317.15500.1|Name=mRNA_H-elongata_contig78317.15500.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=240bp
MQLQDALWRDLPVLKDPVLQSLDRINVDRSLLDQEVRADMRIGAARLLAD
RSNGDGGDGGGGSGERASSSTADSSGRSDALGSNGPSSSSLPPDFLKTIE
SPLDSQLIARYTMLERKDKLMIGSRWVLVLGVLTHDSYLLLFDVPKGHSS
HKKNLNARTSEVFAELVPKPGVDAMATEISKHKDGGKSLDVNGLPIPPSV
AIDLSACQVHFKPDGKSDATFEITEIRPAKGVTGVFKVT*
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