mRNA_H-elongata_contig7804.15475.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A2J7ZRN6_9CHLO (Transmembrane protein 97 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZRN6_9CHLO) HSP 1 Score: 99.8 bits (247), Expect = 3.330e-21 Identity = 53/116 (45.69%), Postives = 75/116 (64.66%), Query Frame = 1
Query: 1 LQFHVETNHDYFMAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFGPGA 348
LQ+H++TN D+ ++ + WF +L+ ETL +PFF GF+RR N +R+PCIIYGT AT+++PI+ADIL + S +R L IY P+L++PL LVL MA PF A
Sbjct: 44 LQWHIKTNEDHLVSTNPV-WFVSLVTCETLLQLPFFFVVAYGFIRRANWIRVPCIIYGTHVATTMVPILADILFGPD--SGPKRLTLFWIYFPYLLVPLLLVLRMALVDKPFAAAA 156
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A2K3E7Z2_CHLRE (EXPERA domain-containing protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E7Z2_CHLRE) HSP 1 Score: 97.8 bits (242), Expect = 1.680e-20 Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 1
Query: 1 LQFHVETNHDYFMAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFG 339
LQ+H++TN D+ ++ + WF +L+W ET +PFF A F++R N +R+PCIIYG AT+++PI+ DIL S + L +IY P+L LPLALV+ MA PFG
Sbjct: 44 LQWHIKTNGDHLVSTNPL-WFVSLVWCETALQLPFFFVAAYAFIKRANWIRVPCIIYGAHVATTMVPILTDILFSPA--AGSHSPALAAIYAPYLALPLALVIRMAVSAQPFG 153
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A813FG80_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FG80_POLGL) HSP 1 Score: 96.3 bits (238), Expect = 6.750e-20 Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 1 LQFHVETNHDYFMAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRW---NAVRIPCIIYGTEAATSVIPIIADI-LASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPF 336
LQ HVE N D+ MA P W +L+ E L +PFF FA A F R NA+R+PCIIYGT T+ IPI+A I L +E+ S+ R+KL +Y+P+L +PL L +M A P PF
Sbjct: 51 LQIHVEANGDFLMASPP-SWLRSLLAAELLLQLPFFPFAAAAFWRASPADNAMRLPCIIYGTHVVTTQIPILAAIVLDTEHVKSESHRWKLFGMYVPYLAVPLLLTAVMLARPAPF 165
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A836BPG6_9CHLO (EXPERA domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BPG6_9CHLO) HSP 1 Score: 95.9 bits (237), Expect = 8.630e-20 Identity = 46/112 (41.07%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 1 LQFHVETNHDYFMAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPF 336
LQ+H++TN D+ ++ + WF +++W ET+ +PFF A F+++ N +RIPCIIYG+ AT+++PI+ DIL S ++ L +IY+P+LI+P+ LV+ MAA P+
Sbjct: 45 LQWHIKTNGDHLVSSNPV-WFVSMVWCETVLQMPFFFVAAWAFIKKANWIRIPCIIYGSHVATTMVPILGDILFGPE--SGPNKHVLAAIYVPYLIVPVLLVIRMAAAEKPW 153
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A150GYU0_GONPE (EXPERA domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GYU0_GONPE) HSP 1 Score: 94.4 bits (233), Expect = 3.050e-19 Identity = 50/114 (43.86%), Postives = 76/114 (66.67%), Query Frame = 1
Query: 1 LQFHVETNHDYFMAK-PTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFG 339
L++H+E N D+ ++K PT WF +L+W E L+ +PFF A F++R N +R+P IIYG T++IPI+ DIL + S +R+ L +IY+P+LI+PL L++ MA PFG
Sbjct: 45 LKWHIEMNGDHLVSKNPT--WFVSLVWGEVLYQLPFFFVASYAFIKRRNWIRVPSIIYGAHVVTTMIPILTDILFGPD--SGPKRHTLAAIYVPYLIVPLLLLVRMAVVEQPFG 154
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A8J4CRT1_9CHLO (EXPERA domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CRT1_9CHLO) HSP 1 Score: 93.2 bits (230), Expect = 7.600e-19 Identity = 49/113 (43.36%), Postives = 72/113 (63.72%), Query Frame = 1
Query: 1 LQFHVETNHDYFMAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFG 339
+Q+H++TN D+ + + WF +L+ E +PFF FA F++R N +R+P I+YGT ATS++PI+ DIL S + S +R L IYLP+LI+PL LV+ M PFG
Sbjct: 45 IQWHIKTNGDHLVGTNPL-WFVSLVACECFIQLPFFFFATYAFIKRRNWIRMPSILYGTHVATSMVPILVDILLSPS--SGPKRVTLALIYLPYLIVPLLLVVRMVVTAQPFG 154
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: D8UHN3_VOLCA (EXPERA domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UHN3_VOLCA) HSP 1 Score: 93.2 bits (230), Expect = 7.990e-19 Identity = 48/113 (42.48%), Postives = 76/113 (67.26%), Query Frame = 1
Query: 1 LQFHVETNHDYFMAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFG 339
LQ+H++TN D+ ++ + WF +L+ E L +PFF A F++R N +RIPCI+YG+ AT+++PI+++ L S + +R LVSIYLP+L++P+ LV+ MA PFG
Sbjct: 45 LQWHIKTNGDHLVSSNPL-WFVSLVACEILLQLPFFFVASYAFLKRRNWIRIPCIVYGSHVATTMVPILSEFLFSPE--AGPKRLTLVSIYLPYLVVPVLLVVRMAVVERPFG 154
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: C1EB28_MICCC (EXPERA domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EB28_MICCC) HSP 1 Score: 91.3 bits (225), Expect = 3.870e-18 Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 1 LQFHVETNHDYFMAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSD-VQRYKLVSIYLPWLILPLALVLIMAADPTPFG 339
L FHV TN D MA P WF++ I E LF +PFF F R N +RIP ++YG AT++IPI+A+IL D R+KL IYLP+L++P ++ + D PFG
Sbjct: 44 LDFHVRTNSDPLMADPPT-WFKSFILFELLFQLPFFFIGFKAFYERRNWIRIPGVVYGAHTATTLIPILAEILHPATVFPDEAARWKLFLIYLPYLLVPASMAYALGVDDKPFG 156
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A4D9D300_9STRA (EXPERA domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D300_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 4.710e-18 Identity = 48/117 (41.03%), Postives = 76/117 (64.96%), Query Frame = 1
Query: 1 LQFHVETNHDYFMAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFGPGAP 351
L+++ ET D+ MA P PWF+A++ E + +PFF A GF + N +R+PCI+YG+ AT+++PI+ D A +LS ++ L+ IY P+L++P+ LV+IM + PFG G P
Sbjct: 48 LRWYTETYGDFLMANPP-PWFQAVVACELVMQLPFFFVAAYGFWTQQNWLRLPCIVYGSHVATTLVPIL-DAFARAPHLSLDKKMTLIGIYSPYLLVPVMLVVIMWRNERPFGMGLP 162
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A836BQS8_9CHLO (EXPERA domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BQS8_9CHLO) HSP 1 Score: 90.9 bits (224), Expect = 5.600e-18 Identity = 48/113 (42.48%), Postives = 71/113 (62.83%), Query Frame = 1
Query: 1 LQFHVETNHDYFMAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFG 339
LQ+H++TN D+ +A + WF++LI E F +PFF A F+ + N +RIPCIIYG+ AT+V+PI+ D L + +Y L SI P+L++PL LV+ MA P+G
Sbjct: 45 LQWHIKTNGDHLVATNPV-WFKSLICCELTFQLPFFFIATYAFITKANWIRIPCIIYGSHVATTVVPILGDFLFGPE--AGPNKYVLASINAPFLVIPLLLVIRMAMVEQPWG 154 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7804.15475.1 >prot_H-elongata_contig7804.15475.1 ID=prot_H-elongata_contig7804.15475.1|Name=mRNA_H-elongata_contig7804.15475.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp MAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAAback to top mRNA from alignment at H-elongata_contig7804:4715..6304+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7804.15475.1 ID=mRNA_H-elongata_contig7804.15475.1|Name=mRNA_H-elongata_contig7804.15475.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1590bp|location=Sequence derived from alignment at H-elongata_contig7804:4715..6304+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7804:4715..6304+ >mRNA_H-elongata_contig7804.15475.1 ID=mRNA_H-elongata_contig7804.15475.1|Name=mRNA_H-elongata_contig7804.15475.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=684bp|location=Sequence derived from alignment at H-elongata_contig7804:4715..6304+ (Himanthalia elongata Himel1 dioecious)back to top |