mRNA_H-elongata_contig78023.15473.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A6H5L264_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L264_9PHAE) HSP 1 Score: 365 bits (937), Expect = 3.190e-125 Identity = 203/233 (87.12%), Postives = 211/233 (90.56%), Query Frame = 1
Query: 1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDP-----SGLDEVARSTAGFSGAELANVINEAAMLAAR 684
RSVSFAD+AGADEAK EL ELVDFL ARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEA VPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLP+ GRR ILEVH +KVRM + L+ +AR TAGFSGAELANV+NEAA+LAAR
Sbjct: 31 RSVSFADIAGADEAKVELKELVDFL-TFPARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEARVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPDAPGRRAILEVHCRKVRMQGGRQDTIAVLENIARVTAGFSGAELANVVNEAAILAAR 262
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: D8LSS7_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSS7_ECTSI) HSP 1 Score: 365 bits (937), Expect = 1.750e-123 Identity = 203/233 (87.12%), Postives = 212/233 (90.99%), Query Frame = 1
Query: 1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRM-GDPSG----LDEVARSTAGFSGAELANVINEAAMLAAR 684
RSVSFAD+AGADEAK EL ELVDFL ARYAD+GARLPRGVLLSGPSGTGKTLLARAMAAEA VPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLP+ GRR ILEVH +KVRM G+ L+ +AR TAGFSGAELANV+NEAA+LAAR
Sbjct: 187 RSVSFADIAGADEAKVELKELVDFL-TFPARYADIGARLPRGVLLSGPSGTGKTLLARAMAAEARVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPDAPGRRAILEVHCRKVRMQGERQDTIAVLENIARVTAGFSGAELANVVNEAAILAAR 418
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A835Z9E9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9E9_9STRA) HSP 1 Score: 292 bits (747), Expect = 1.080e-96 Identity = 161/226 (71.24%), Postives = 180/226 (79.65%), Query Frame = 1
Query: 49 ELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRS--------------VLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTAGFSGAELANVINEAAMLAAR 684
ELAE+VDFL + A RY +GARLPRG+LLSGPSGTGKTLLARA+AAE+ VPF SCSASDFVEMLVGRGA+RVRDLF+RG A+ P IIF+DELDALAK RGG+NSNDEREQTLNQLLTE+DGFDS + +AATNRPEVLDPALTRPGRFDRHV VGLP+E GR IL VH +KVR G L VAR TAGFSGAELAN++NEAA+LA R
Sbjct: 15 ELAEVVDFLRD-ARRYEAMGARLPRGILLSGPSGTGKTLLARAVAAESRVPFISCSASDFVEMLVGRGASRVRDLFKRGAAAAPCIIFVDELDALAKARGGLNSNDEREQTLNQLLTELDGFDSSVAASAXXXXXXXXXXXXXXXIAATNRPEVLDPALTRPGRFDRHVHVGLPDERGRVSILTVHMRKVRAGPDVDLRTVARETAGFSGAELANIVNEAALLAVR 239
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A4D9CR60_9STRA (AAA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR60_9STRA) HSP 1 Score: 288 bits (738), Expect = 1.060e-93 Identity = 154/228 (67.54%), Postives = 182/228 (79.82%), Query Frame = 1
Query: 1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTAGFSGAELANVINEAAMLAAR 684
R ++F DVAG D AK EL E+V+FL + ARY +GARLP+G+LLSG GTGKTLLARA+A EAGV F SCSAS+F E+LVGRGAAR+RDLFQRG +S P IIFIDELDALAK RG +SNDEREQTLNQLL EMDGF+ E VLV+AATNRPEVLDPAL RPGRFDRH+ VGLP+ GRR IL+VHS+ V + + +A + G+SGAEL+NV+NEAA+LA R
Sbjct: 106 RVITFKDVAGIDAAKLELVEVVNFLRD-RARYDAIGARLPKGILLSGAPGTGKTLLARAVANEAGVSFISCSASEFCELLVGRGAARMRDLFQRGFSSSPCIIFIDELDALAKTRGSFSSNDEREQTLNQLLCEMDGFEGEENCVLVIAATNRPEVLDPALIRPGRFDRHIAVGLPDTRGRRAILDVHSRHVCLAPGVDMQRIATRSKGYSGAELSNVVNEAALLAVR 332
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A024FZ62_9STRA (AAA domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ62_9STRA) HSP 1 Score: 280 bits (717), Expect = 1.520e-91 Identity = 155/232 (66.81%), Postives = 182/232 (78.45%), Query Frame = 1
Query: 1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGF-DSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTAGF---SGAELANVINEAAMLAAR 684
+SVSF D+ G D A+ EL E+VDFL RY +GAR+P+G+LL GPSGTGKTLLARA+AAEA V F CSASDFVEMLVGRGAARVRDLF + IIFIDE+DALAK RGGINSNDEREQTLNQLLTEMDGF SE SV+V+AATNRP+VLDPAL RPGRFDRHV VGLP+ GR IL++H+++V++GD L+ VA + SGAELAN++NEAA+LA R
Sbjct: 63 QSVSFQDIGGIDSARKELEEIVDFL-HNPDRYRAIGARVPKGILLCGPSGTGKTLLARALAAEANVAFLFCSASDFVEMLVGRGAARVRDLFTQAATYDRCIIFIDEIDALAKARGGINSNDEREQTLNQLLTEMDGFAGSESNSVIVIAATNRPQVLDPALCRPGRFDRHVYVGLPDHKGRLDILKLHTRRVKLGDDVDLNRVAENCGIMGQQSGAELANLVNEAALLAVR 293
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A1V9YPE2_9STRA (Cell division protease ftsH n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPE2_9STRA) HSP 1 Score: 284 bits (726), Expect = 2.290e-91 Identity = 154/230 (66.96%), Postives = 183/230 (79.57%), Query Frame = 1
Query: 1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTA--GFSGAELANVINEAAMLAAR 684
+ +SFADVAG D+AK EL E+VDFL + RY +GA++P+GVLL GPSGTGKTLLARA+AAEAGV F CSASDFVEMLVGRGA+RVRDLF + IIFIDELDALAK RGG+NSNDEREQTLNQLLTEMDGF+ V+V+AATNRP VLDPAL RPGRFDRHV VGLP+ AGR IL VH+K++R+G L +A+S G+SGA+LA ++NEAA++A R
Sbjct: 171 KRISFADVAGIDKAKKELEEVVDFL-KHPERYEKIGAKIPKGVLLCGPSGTGKTLLARAVAAEAGVAFLYCSASDFVEMLVGRGASRVRDLFTQASQHPKCIIFIDELDALAKARGGLNSNDEREQTLNQLLTEMDGFEGHTEGVIVIAATNRPHVLDPALCRPGRFDRHVYVGLPDAAGREAILSVHAKRIRLGTSVVLGALAKSPKLDGYSGAQLACLVNEAALMAVR 399
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A1W0A7G4_9STRA (Cell division protease ftsH n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7G4_9STRA) HSP 1 Score: 280 bits (717), Expect = 5.540e-90 Identity = 151/230 (65.65%), Postives = 182/230 (79.13%), Query Frame = 1
Query: 1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTA--GFSGAELANVINEAAMLAAR 684
+ +SFADVAG D+AK EL E+VDFL + RY +GA++P+GVLL GPSGTGKTLLARA+AAEAGV F CSASDFVEMLVGRGA+RVRDLF + IIFIDELDALAK RGGINSNDEREQTLNQLLTEMDGF+ V+V+AATNRP VLDPAL RPGRFDRHV VGLP+ GR IL+VH+ ++R+ + E+A++ G+SGA+LA ++NEAA++A R
Sbjct: 171 KRISFADVAGIDKAKKELEEVVDFL-KNPQRYEKIGAKIPKGVLLCGPSGTGKTLLARAVAAEAGVAFLYCSASDFVEMLVGRGASRVRDLFTQASQHPKCIIFIDELDALAKARGGINSNDEREQTLNQLLTEMDGFEGHTEGVIVIAATNRPHVLDPALCRPGRFDRHVYVGLPDANGREAILKVHANRIRLRPSLSIAEIAKNPKLNGYSGAQLACLVNEAALMAVR 399
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A6G0WHW9_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHW9_9STRA) HSP 1 Score: 279 bits (714), Expect = 1.360e-89 Identity = 151/228 (66.23%), Postives = 178/228 (78.07%), Query Frame = 1
Query: 7 VSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVA--RSTAGFSGAELANVINEAAMLAAR 684
+SFAD+AG D AK EL E+VDFL + RY +GA++P+GVLL GPSGTGKT+LARA+AAEAGVPF CSASDFVEMLVGRGA+RVRDLF + IIFIDE+DALAK RGG+NSNDEREQTLNQLLTEMDGF+ VLV+AATNRP VLDPAL RPGRFDRHV VGLP+ GR IL VH K++R+ + E+A R G SGA+LA ++NEAA++A R
Sbjct: 171 ISFADIAGIDAAKQELEEIVDFL-KRPQRYEAIGAKIPKGVLLCGPSGTGKTMLARAVAAEAGVPFLFCSASDFVEMLVGRGASRVRDLFTQASQHAKCIIFIDEIDALAKARGGLNSNDEREQTLNQLLTEMDGFEGHTEGVLVIAATNRPHVLDPALLRPGRFDRHVFVGLPDATGREAILRVHVKRIRLHSRVSIKELAVNRQLEGASGAQLACLVNEAALMAVR 397
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A7S2RJG8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJG8_9STRA) HSP 1 Score: 280 bits (716), Expect = 1.810e-89 Identity = 152/231 (65.80%), Postives = 185/231 (80.09%), Query Frame = 1
Query: 1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRG-GINSNDEREQTLNQLLTEMDGFDSEGRS--VLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTAGFSGAELANVINEAAMLAAR 684
+ V+F DVAG D AKAEL E+VDFL + + R+ +GAR+P+G+LL+GP+GTGKT+LARAMA E G PF SAS+FVE LVGRGAARVRDLF+R P+IIFIDE+D+L + RG +NSN+EREQTLNQ+LTEMDGFDS G S +LV+AATNRP+VLDPAL RPGRFDRHV VGLP+ GR IL H++++RM L VARSTAGFSGA+LANV+NEAA+LA R
Sbjct: 193 QGVTFNDVAGVDAAKAELLEVVDFLRD-SERFRKMGARMPKGLLLAGPAGTGKTMLARAMANEVGAPFLVVSASEFVETLVGRGAARVRDLFKRARDQAPAIIFIDEVDSLGRARGLSLNSNEEREQTLNQILTEMDGFDSSGSSAPILVIAATNRPQVLDPALLRPGRFDRHVYVGLPDVTGREAILASHARRIRMDSTVDLSAVARSTAGFSGADLANVVNEAALLAVR 422
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: T0QP29_SAPDV (AAA domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QP29_SAPDV) HSP 1 Score: 279 bits (713), Expect = 2.040e-89 Identity = 153/228 (67.11%), Postives = 179/228 (78.51%), Query Frame = 1
Query: 7 VSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTA--GFSGAELANVINEAAMLAAR 684
+SFADVAG D+AK EL E+VDFL + RY +GA++P+GVLL GPSGTGKTLLARA+AAEAGV F CSASDFVEMLVGRGA+RVRDLF + IIFIDELDALAK RGG+NSNDEREQTLNQLLTEMDGF+ V+V+AATNRP VLDPAL RPGRFDRHV VGLP+ AGR IL VH K++R G + +A++ G SGA+LA ++NEAA+LA R
Sbjct: 173 ISFADVAGIDKAKKELEEVVDFL-KRPQRYETIGAKIPKGVLLCGPSGTGKTLLARAVAAEAGVAFLYCSASDFVEMLVGRGASRVRDLFTQASQHPKCIIFIDELDALAKARGGLNSNDEREQTLNQLLTEMDGFEGHTEGVIVIAATNRPHVLDPALCRPGRFDRHVYVGLPDAAGREAILRVHMKRIRTGLTVSVTTIAKNPKLDGSSGAQLACLVNEAALLAVR 399 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78023.15473.1 >prot_H-elongata_contig78023.15473.1 ID=prot_H-elongata_contig78023.15473.1|Name=mRNA_H-elongata_contig78023.15473.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=228bp RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGback to top mRNA from alignment at H-elongata_contig78023:452..2777+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78023.15473.1 ID=mRNA_H-elongata_contig78023.15473.1|Name=mRNA_H-elongata_contig78023.15473.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2326bp|location=Sequence derived from alignment at H-elongata_contig78023:452..2777+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78023:452..2777+ >mRNA_H-elongata_contig78023.15473.1 ID=mRNA_H-elongata_contig78023.15473.1|Name=mRNA_H-elongata_contig78023.15473.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1368bp|location=Sequence derived from alignment at H-elongata_contig78023:452..2777+ (Himanthalia elongata Himel1 dioecious)back to top |