prot_H-elongata_contig77407.15417.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77407.15417.1
Unique Nameprot_H-elongata_contig77407.15417.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
BLAST of mRNA_H-elongata_contig77407.15417.1 vs. uniprot
Match: D8LGB2_ECTSI (Peroxisomal membrane protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB2_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 1.080e-67
Identity = 100/118 (84.75%), Postives = 107/118 (90.68%), Query Frame = 0
Query:    1 MQRNATGSFGALFHGPSGHYFYGFLDSKLPGTKPMTVVSKVAIDQTIWNPIFGVMFFTYLGLAEGKSFSEIQKKIKNDLATAVMGSWSVWIPAHTINFKFVPTSQRLLYINTIQVRLN 118
            M+    G+FGAL HGP+GHYFYG LD+KLPGTKPMTV SKVAIDQTIWNPIFGVMFFTYLGLAEGKS  +IQKKIKNDLATAVMGSW+VWIPAHTINFKFVPTSQRLLYINTIQ+  N
Sbjct:   48 MRTLRLGTFGALVHGPTGHYFYGMLDAKLPGTKPMTVASKVAIDQTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQIGYN 165          
BLAST of mRNA_H-elongata_contig77407.15417.1 vs. uniprot
Match: A0A835Z5E2_9STRA (Peroxisomal membrane protein-related n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E2_9STRA)

HSP 1 Score: 196 bits (498), Expect = 5.350e-62
Identity = 92/118 (77.97%), Postives = 103/118 (87.29%), Query Frame = 0
Query:    1 MQRNATGSFGALFHGPSGHYFYGFLDSKLPGTKPMTVVSKVAIDQTIWNPIFGVMFFTYLGLAEGKSFSEIQKKIKNDLATAVMGSWSVWIPAHTINFKFVPTSQRLLYINTIQVRLN 118
            M+    GSFGAL HGP+GH+FYG LDSKLPGT PMTV +KVAIDQTIWNPIFG+MFF+YLGL EGKS  +I +KIK DLATAVMGSW+VWIPAHTINFKFVPTSQRLLYIN+IQ+  N
Sbjct:   48 MRTVRLGSFGALVHGPTGHWFYGMLDSKLPGTAPMTVATKVAIDQTIWNPIFGIMFFSYLGLTEGKSVDQIYQKIKADLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINSIQIGYN 165          
BLAST of mRNA_H-elongata_contig77407.15417.1 vs. uniprot
Match: A0A7S2RA66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RA66_9STRA)

HSP 1 Score: 191 bits (484), Expect = 8.190e-60
Identity = 88/118 (74.58%), Postives = 99/118 (83.90%), Query Frame = 0
Query:    1 MQRNATGSFGALFHGPSGHYFYGFLDSKLPGTKPMTVVSKVAIDQTIWNPIFGVMFFTYLGLAEGKSFSEIQKKIKNDLATAVMGSWSVWIPAHTINFKFVPTSQRLLYINTIQVRLN 118
            M+    GSFG L HG +GHYFYGFLDSKLPGTKP+TV SKV IDQ  WNP FG+MFFTYLGLAEGKSF++I KKIK DL TAVMGSW+VW+PAHTINF F+P SQRLLYIN+IQ+  N
Sbjct:   57 MRTVRLGSFGLLVHGTTGHYFYGFLDSKLPGTKPVTVASKVLIDQVFWNPCFGIMFFTYLGLAEGKSFADIMKKIKADLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYN 174          
BLAST of mRNA_H-elongata_contig77407.15417.1 vs. uniprot
Match: A0A7S1UMI8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UMI8_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.840e-58
Identity = 86/118 (72.88%), Postives = 97/118 (82.20%), Query Frame = 0
Query:    1 MQRNATGSFGALFHGPSGHYFYGFLDSKLPGTKPMTVVSKVAIDQTIWNPIFGVMFFTYLGLAEGKSFSEIQKKIKNDLATAVMGSWSVWIPAHTINFKFVPTSQRLLYINTIQVRLN 118
            M+    GSFG L HG +GHYFYGFLDSKLPGTKP+TV SKVAIDQ +WNPIFG+MFF YL   EGKSFS+   KIK+DL TAVMGSW+VW+PAHTINF F+P SQRLLYINTIQ+  N
Sbjct:    1 MRTLRLGSFGFLVHGTTGHYFYGFLDSKLPGTKPVTVASKVAIDQVLWNPIFGLMFFGYLNFVEGKSFSDYTAKIKSDLQTAVMGSWAVWVPAHTINFAFIPPSQRLLYINTIQIGYN 118          
BLAST of mRNA_H-elongata_contig77407.15417.1 vs. uniprot
Match: A0A7S2LHQ9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHQ9_9STRA)

HSP 1 Score: 186 bits (471), Expect = 7.280e-58
Identity = 86/118 (72.88%), Postives = 98/118 (83.05%), Query Frame = 0
Query:    1 MQRNATGSFGALFHGPSGHYFYGFLDSKLPGTKPMTVVSKVAIDQTIWNPIFGVMFFTYLGLAEGKSFSEIQKKIKNDLATAVMGSWSVWIPAHTINFKFVPTSQRLLYINTIQVRLN 118
            M+    GSFG L HG +GHYFYGFLDSKLPGTKP TV SKV IDQTIWNPIFG+MFF YL L EGKSF + +KKI++DL TAVMGSW+VW+PAHTINF F+P SQRLLYIN+IQ+  N
Sbjct:   48 MRTIRLGSFGFLVHGTTGHYFYGFLDSKLPGTKPQTVASKVLIDQTIWNPIFGLMFFGYLNLVEGKSFDDYKKKIQSDLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYN 165          
BLAST of mRNA_H-elongata_contig77407.15417.1 vs. uniprot
Match: A0A7S2V4A9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4A9_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.600e-57
Identity = 87/118 (73.73%), Postives = 96/118 (81.36%), Query Frame = 0
Query:    1 MQRNATGSFGALFHGPSGHYFYGFLDSKLPGTKPMTVVSKVAIDQTIWNPIFGVMFFTYLGLAEGKSFSEIQKKIKNDLATAVMGSWSVWIPAHTINFKFVPTSQRLLYINTIQVRLN 118
            M+    GSFG LFHGPSGHYFYGFLDSK+ GT    V +KVAIDQ  WNPIFG +FFTYLGLAEGKS  EI  KIK+DL TAVMGSW+VW+PAH INFKFVP+SQRLLYINTIQ+  N
Sbjct:   48 MRTIRLGSFGLLFHGPSGHYFYGFLDSKIVGTSTQAVATKVAIDQLFWNPIFGTVFFTYLGLAEGKSGGEIVNKIKSDLKTAVMGSWTVWVPAHIINFKFVPSSQRLLYINTIQIGYN 165          
BLAST of mRNA_H-elongata_contig77407.15417.1 vs. uniprot
Match: A0A7R9Z9F5_9STRA (Hypothetical protein n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9Z9F5_9STRA)

HSP 1 Score: 185 bits (469), Expect = 3.010e-57
Identity = 87/118 (73.73%), Postives = 97/118 (82.20%), Query Frame = 0
Query:    1 MQRNATGSFGALFHGPSGHYFYGFLDSKLPGTKPMTVVSKVAIDQTIWNPIFGVMFFTYLGLAEGKSFSEIQKKIKNDLATAVMGSWSVWIPAHTINFKFVPTSQRLLYINTIQVRLN 118
            M+    GSFG L HG +GH+FYGFLDSKLPGTKP+TV +KVAIDQTIWNPIFG MFF YL L EGKSF + + KIK DL TAVMGSW+VW+PAHTINF FVP SQRLLYINTIQ+  N
Sbjct:   75 MRTIRLGSFGFLLHGTTGHFFYGFLDSKLPGTKPVTVATKVAIDQTIWNPIFGCMFFGYLNLMEGKSFEDYKNKIKADLKTAVMGSWAVWVPAHTINFAFVPPSQRLLYINTIQIGYN 192          
BLAST of mRNA_H-elongata_contig77407.15417.1 vs. uniprot
Match: A0A7S1E367_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E367_9STRA)

HSP 1 Score: 184 bits (466), Expect = 3.820e-57
Identity = 85/112 (75.89%), Postives = 95/112 (84.82%), Query Frame = 0
Query:    7 GSFGALFHGPSGHYFYGFLDSKLPGTKPMTVVSKVAIDQTIWNPIFGVMFFTYLGLAEGKSFSEIQKKIKNDLATAVMGSWSVWIPAHTINFKFVPTSQRLLYINTIQVRLN 118
            GSFG L HG +GHYFYGFLDSKLPGTKP+TV +KVAIDQTIWNPIFG+MFF YL L EGKSF   + KI  DLATAVMGSW+VW+PAHTINF F+P SQRLLYIN+IQ+  N
Sbjct:   55 GSFGLLLHGTTGHYFYGFLDSKLPGTKPVTVATKVAIDQTIWNPIFGLMFFGYLNLVEGKSFQAYKDKINADLATAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYN 166          
BLAST of mRNA_H-elongata_contig77407.15417.1 vs. uniprot
Match: A0A6U6CAW4_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6CAW4_9STRA)

HSP 1 Score: 184 bits (466), Expect = 4.610e-57
Identity = 86/118 (72.88%), Postives = 96/118 (81.36%), Query Frame = 0
Query:    1 MQRNATGSFGALFHGPSGHYFYGFLDSKLPGTKPMTVVSKVAIDQTIWNPIFGVMFFTYLGLAEGKSFSEIQKKIKNDLATAVMGSWSVWIPAHTINFKFVPTSQRLLYINTIQVRLN 118
            M+    GSFG L HG +GHYFYGFLDSK+PGTKP+TV +KVAIDQTIWNPIFG+MFF YL + EGKSF     KIK DL TAVMGSW+VW+PAHTINF FVP SQRLLYINTIQ+  N
Sbjct:   54 MRTIRLGSFGFLLHGTTGHYFYGFLDSKMPGTKPVTVATKVAIDQTIWNPIFGLMFFGYLNIMEGKSFETYTNKIKADLKTAVMGSWAVWVPAHTINFAFVPPSQRLLYINTIQIGYN 171          
BLAST of mRNA_H-elongata_contig77407.15417.1 vs. uniprot
Match: B7G8P1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8P1_PHATC)

HSP 1 Score: 183 bits (464), Expect = 7.680e-57
Identity = 87/118 (73.73%), Postives = 94/118 (79.66%), Query Frame = 0
Query:    1 MQRNATGSFGALFHGPSGHYFYGFLDSKLPGTKPMTVVSKVAIDQTIWNPIFGVMFFTYLGLAEGKSFSEIQKKIKNDLATAVMGSWSVWIPAHTINFKFVPTSQRLLYINTIQVRLN 118
            M+    GSFG L HG +GHYFYGFLDSKLPGT PMTV SKVAIDQTIWNPIFG MFF YL L EGKS  +   KIK DL TAVMGSW+VW+PAHTINF FVP +QRLLYINTIQ+  N
Sbjct:   49 MRTFRMGSFGFLLHGTTGHYFYGFLDSKLPGTAPMTVASKVAIDQTIWNPIFGCMFFGYLNLMEGKSLDDYTTKIKTDLKTAVMGSWAVWVPAHTINFAFVPPAQRLLYINTIQIGYN 166          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77407.15417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGB2_ECTSI1.080e-6784.75Peroxisomal membrane protein-related n=1 Tax=Ectoc... [more]
A0A835Z5E2_9STRA5.350e-6277.97Peroxisomal membrane protein-related n=1 Tax=Tribo... [more]
A0A7S2RA66_9STRA8.190e-6074.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1UMI8_9STRA1.840e-5872.88Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2LHQ9_9STRA7.280e-5872.88Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2V4A9_9STRA2.600e-5773.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9Z9F5_9STRA3.010e-5773.73Hypothetical protein n=3 Tax=Odontellaceae TaxID=2... [more]
A0A7S1E367_9STRA3.820e-5775.89Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A6U6CAW4_9STRA4.610e-5772.88Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
B7G8P1_PHATC7.680e-5773.73Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 61..115
e-value: 6.7E-17
score: 61.5
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 9..113
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 9..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77407contigH-elongata_contig77407:289..1485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77407.15417.1mRNA_H-elongata_contig77407.15417.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77407 283..1485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77407.15417.1 ID=prot_H-elongata_contig77407.15417.1|Name=mRNA_H-elongata_contig77407.15417.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
MQRNATGSFGALFHGPSGHYFYGFLDSKLPGTKPMTVVSKVAIDQTIWNP
IFGVMFFTYLGLAEGKSFSEIQKKIKNDLATAVMGSWSVWIPAHTINFKF
VPTSQRLLYINTIQVRLN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22