prot_H-elongata_contig119883.1536.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119883.1536.1
Unique Nameprot_H-elongata_contig119883.1536.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119883.1536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..69
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 53..70
NoneNo IPR availableTMHMMTMhelixcoord: 74..91
NoneNo IPR availableTMHMMTMhelixcoord: 31..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119883contigH-elongata_contig119883:379..795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119883.1536.1mRNA_H-elongata_contig119883.1536.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119883 369..900 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119883.1536.1 ID=prot_H-elongata_contig119883.1536.1|Name=mRNA_H-elongata_contig119883.1536.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
MFLSCRWRVSFLPLACPFLVVRVFLSCRWRVSFLPLACSFLVVRVFLSYR
KGVPFLPLACIFLAVGMFLSCRKGVPFLSLACSFLVVRGFLSCRWRVSFL
PLACMFLSCRKAGSYRTTKIKISSRFKLKSGSDCSKGK*
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