mRNA_H-elongata_contig11986.1533.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11986.1533.1
Unique NamemRNA_H-elongata_contig11986.1533.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: D7G2J2_ECTSI (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2J2_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 1.260e-93
Identity = 161/257 (62.65%), Postives = 188/257 (73.15%), Query Frame = 1
Query:    1 RAWELEVDADEDSE--TAAPSEAFLSLQKELDEKEKIQRENEHRAEKQEALIANAAKRLXXXXXXXRVNAKNPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIV--PKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQIRDED 759
            RAWE++V+AD+  E     PSEAFLSLQ+EL+EKEKIQ+EN  RA+ Q+AL A AA  L       + N KNP+VFLDIEIAD TGA SRL KG N GR+T+E+FE+A+P+TAENFRALCTGEK  G      ++ G      V  P               GGESIYGPTF DESF +KHD+PGLLSMANSG+     +FFITF PLPWLDSKHVVFGKVV+GME+VRKIEDCGT+SGEPTKRVQIAECGQI DE+
Sbjct:   15 RAWEVDVEADDKDEGDDTTPSEAFLSLQRELEEKEKIQQENAERAKNQDALAAEAANSLRRKEEVRKANTKNPRVFLDIEIADTTGAKSRLAKGKNAGRVTLELFENAVPRTAENFRALCTGEKV-GRERESDTWCGATSRTEVKPPDLNLTAYPPCPRCSCGGESIYGPTFVDESFQLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQIPDEE 270          
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A0A146LV45_LYGHE (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LV45_LYGHE)

HSP 1 Score: 212 bits (539), Expect = 1.320e-63
Identity = 100/181 (55.25%), Postives = 130/181 (71.82%), Query Frame = 1
Query:  205 KNPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
            K  +VF DIEI               +GR+T ++F+D +P+TAENFRALCTGEK +GASG PL +  +IFHR++P FM QGGD TR +G+GGESIYG  FADE+F ++HD+PGLLSMAN+G      +FFIT  P PWLD KHVVFG+V DG +IV+KIE  GT++G P  R+ I +CG++
Sbjct:   10 KMKRVFFDIEIGQKA-----------VGRVTFKLFDDVVPKTAENFRALCTGEKGKGASGKPLHFKNSIFHRVIPDFMIQGGDFTRHNGTGGESIYGEKFADENFRLRHDKPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGQVEDGFDIVKKIEQQGTANGSPRTRIVITDCGEL 179          
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A2DT06_TRIVA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2DT06_TRIVA)

HSP 1 Score: 209 bits (533), Expect = 8.560e-63
Identity = 99/182 (54.40%), Postives = 126/182 (69.23%), Query Frame = 1
Query:  205 KNPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQIR 750
            K PK F DI I           +G  +G+I  E+F D +P+TAENFRALCTGEK  G SG PLSY G +FHRI+P+FM QGGD TR +G+GGESIYG  F DE+F +KHD+PGLLSMAN+G      +FFIT    PWLD  H VFG+V++GM+IV++IE CGT SG P     + +CG+++
Sbjct:    3 KRPKTFFDISI-----------RGDKVGKIVFELFNDIVPKTAENFRALCTGEKGIGKSGMPLSYKGTMFHRIIPQFMIQGGDFTRFNGTGGESIYGMKFDDENFKVKHDKPGLLSMANAGPNTNGSQFFITTVETPWLDGHHCVFGQVIEGMDIVKQIESCGTESGRPRAMCMVTDCGEMK 173          
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: UPI0018FE4581 (peptidylprolyl isomerase n=1 Tax=Streptomyces sp. NRRL F-5126 TaxID=1463857 RepID=UPI0018FE4581)

HSP 1 Score: 209 bits (532), Expect = 1.090e-62
Identity = 100/180 (55.56%), Postives = 128/180 (71.11%), Query Frame = 1
Query:  208 NPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
            NP+V+ D+ + DV             GRIT E+F D +P+TAENFRALCTGE+  G SG PL + G+ FHR++P+FM QGGD TR DG+GGESIYG  FADE+F +KHD PG+LSMAN+G+     +FFI   P PWLD KHVVFGKV+D ME+V+ IE  G+ +G+ TK V I+ CGQ+
Sbjct:    2 NPRVYFDMTVGDVAA-----------GRITFELFADVVPKTAENFRALCTGERGVGKSGKPLHFEGSKFHRVIPQFMCQGGDFTRGDGTGGESIYGGKFADENFDLKHDVPGILSMANAGRNTNGSQFFICTVPTPWLDGKHVVFGKVIDNMELVKTIESVGSQNGKTTKDVVISACGQL 170          
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: D6AXE0_9ACTN (Peptidyl-prolyl cis-trans isomerase n=36 Tax=Streptomyces TaxID=1883 RepID=D6AXE0_9ACTN)

HSP 1 Score: 208 bits (530), Expect = 2.250e-62
Identity = 100/180 (55.56%), Postives = 127/180 (70.56%), Query Frame = 1
Query:  208 NPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
            NP+VF DIE             GT++GR+T E+F D +P+TAENFRALCTGEK  G  G PL + G+ FHR++P FM QGGD TR +G+GGESIYG  FADE+F +KHD PG+LSMAN+G      +FFI   P PWLD KHVVFGKV+DGM+ V+ IE  G+ SG+ +  + I++CGQI
Sbjct:    3 NPQVFFDIEA-----------NGTSLGRVTFELFADVVPKTAENFRALCTGEKGNGRQGKPLHFKGSGFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFADENFQLKHDTPGILSMANAGPHSNGSQFFICTEPTPWLDGKHVVFGKVLDGMDTVKAIESHGSRSGKTSATLTISDCGQI 171          
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A0A388MFL0_CHABU (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MFL0_CHABU)

HSP 1 Score: 207 bits (526), Expect = 9.210e-62
Identity = 100/180 (55.56%), Postives = 125/180 (69.44%), Query Frame = 1
Query:  208 NPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
            NP VF DI I            G  +GRI +E++++ +P+TAENFRALCTGEK  G SG PL Y G  FHR++PKFM QGGD TR DG+GGESIYG  FADE+F  KH  PG+LSMAN+G      +FF+   P PWLD KHVVFGKV+ GM++V K+E  G+SSG  ++ V IA+CGQ+
Sbjct:    3 NPTVFFDITIG-----------GRKVGRIVMELYKNVVPRTAENFRALCTGEKGTGRSGRPLHYKGCTFHRVIPKFMCQGGDFTRGDGTGGESIYGAKFADENFQHKHTEPGVLSMANAGPNTNGSQFFLCTVPTPWLDGKHVVFGKVIQGMDVVAKVESVGSSSGRTSQPVVIADCGQL 171          
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A0A455B6L4_PHYMC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Physeter macrocephalus TaxID=9755 RepID=A0A455B6L4_PHYMC)

HSP 1 Score: 206 bits (524), Expect = 1.890e-61
Identity = 105/182 (57.69%), Postives = 127/182 (69.78%), Query Frame = 1
Query:  202 AKNPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
            AKNP+VF DI I            G   GRI  E+F++ +P+TAENFRALCTGEK RG SG PLSY G  FHRI+P+FM QGGD T  +G+GGESIYG  FADE+F +KH  P LLSMANSG      +FFIT  P PWLD KHVVFGKVV+G ++V+++E  GT SG   + V IA+CGQ+
Sbjct:    2 AKNPQVFFDITIG-----------GKPAGRIVFELFKNIVPRTAENFRALCTGEKGRGVSGKPLSYKGCSFHRIIPEFMCQGGDFTNFNGTGGESIYGMKFADENFELKHTEPFLLSMANSGPNTNGSQFFITTVPCPWLDGKHVVFGKVVEGTDVVKQMEQQGTRSGTVKQPVVIADCGQL 172          
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A0A1Q3BFI6_CEPFO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BFI6_CEPFO)

HSP 1 Score: 206 bits (523), Expect = 2.760e-61
Identity = 102/182 (56.04%), Postives = 127/182 (69.78%), Query Frame = 1
Query:  208 NPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQIRD 753
            NPKVF DI I  +             GRI +E+F DA P+TAENFRALCTGE+  G+SG PL Y G+ FHRI+P FM QGGD TRE+G+GGESIYG  FADE+F MKH  PG+LSMAN+G      +FFI     PWLD KHVVFGKVVDG  +V+++E+ G+ SG  ++ V I +CGQI++
Sbjct:    3 NPKVFFDILIGKMKA-----------GRIVMELFADATPKTAENFRALCTGERGIGSSGKPLHYKGSPFHRIIPNFMCQGGDFTRENGTGGESIYGSKFADENFKMKHTGPGVLSMANAGPNTNGSKFFICTKKTPWLDGKHVVFGKVVDGYSVVKEMEEVGSDSGSTSESVVIEDCGQIKE 173          
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A0A1Z3HTG9_9CYAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HTG9_9CYAN)

HSP 1 Score: 206 bits (523), Expect = 2.760e-61
Identity = 102/183 (55.74%), Postives = 129/183 (70.49%), Query Frame = 1
Query:  199 NAKNPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
            ++ NP+VF DI I            G   GRI IE+  D  PQTAENFRALCTGE+  GASG PL + G+ FHRI+P FM QGGD TR +G+GGESIYG TFADE+F +KH  PG+LSMAN+G      +FF+T    PWLD KHVVFG VV+GM++V+++E  G+SSG+P + V IA+CGQ+
Sbjct:    3 DSTNPQVFFDITIG-----------GQPAGRIVIELRTDVTPQTAENFRALCTGEQGTGASGKPLHFKGSSFHRIIPDFMCQGGDFTRGNGTGGESIYGRTFADENFELKHTGPGILSMANAGPGTNGSQFFLTTVATPWLDGKHVVFGHVVEGMDVVKRMEAVGSSSGKPRQPVVIADCGQL 174          
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A0A0C9RX79_9SPER (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0C9RX79_9SPER)

HSP 1 Score: 205 bits (522), Expect = 3.650e-61
Identity = 102/180 (56.67%), Postives = 122/180 (67.78%), Query Frame = 1
Query:  208 NPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
            N KVF ++++            G   GRI IE+F D  P+TAENFRALCTGEK  G SG PL Y G+IFHR++P FM QGGD TR DG+GGESIYG  FADE+F  KH  PG+LSMAN+G      +FFI     PWLD KHVVFG+V +GME+VR IE  G+S G  +K V IA+CGQI
Sbjct:    3 NSKVFFEMQVG-----------GNPAGRIVIELFGDVTPKTAENFRALCTGEKGMGRSGKPLHYKGSIFHRVIPGFMCQGGDFTRGDGTGGESIYGSKFADENFAKKHTGPGILSMANAGPHTNGSQFFICTEQTPWLDGKHVVFGQVTEGMEVVRAIEKVGSSGGRTSKEVIIADCGQI 171          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2J2_ECTSI1.260e-9362.65PPIase cyclophilin-type domain-containing protein ... [more]
A0A146LV45_LYGHE1.320e-6355.25Peptidyl-prolyl cis-trans isomerase (Fragment) n=1... [more]
A2DT06_TRIVA8.560e-6354.40Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tricho... [more]
UPI0018FE45811.090e-6255.56peptidylprolyl isomerase n=1 Tax=Streptomyces sp. ... [more]
D6AXE0_9ACTN2.250e-6255.56Peptidyl-prolyl cis-trans isomerase n=36 Tax=Strep... [more]
A0A388MFL0_CHABU9.210e-6255.56Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chara ... [more]
A0A455B6L4_PHYMC1.890e-6157.69Peptidyl-prolyl cis-trans isomerase n=1 Tax=Physet... [more]
A0A1Q3BFI6_CEPFO2.760e-6156.04Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cephal... [more]
A0A1Z3HTG9_9CYAN2.760e-6155.74Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halomi... [more]
A0A0C9RX79_9SPER3.650e-6156.67Peptidyl-prolyl cis-trans isomerase n=2 Tax=Arauca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11986contigH-elongata_contig11986:1391..5244 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score166.4
Seed ortholog evalue1.2e-38
Seed eggNOG ortholog2880.D7G2J2
KEGG koko:K01802
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0865@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCyclophilin-like domain
Ec32 orthologEc-12_001720.1
Exons6
Model size1319
Cds size540
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11986.1533.1prot_H-elongata_contig11986.1533.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11986 3202..4900 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929702.2511714-UTR-H-elongata_contig11986:1390..15701622929702.2511714-UTR-H-elongata_contig11986:1390..1570Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11986 1391..1570 +
1691679124.7561336-UTR-H-elongata_contig11986:1390..15701691679124.7561336-UTR-H-elongata_contig11986:1390..1570Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11986 1391..1570 +
1622929702.2709532-UTR-H-elongata_contig11986:1805..19911622929702.2709532-UTR-H-elongata_contig11986:1805..1991Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11986 1806..1991 +
1691679124.765358-UTR-H-elongata_contig11986:1805..19911691679124.765358-UTR-H-elongata_contig11986:1805..1991Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11986 1806..1991 +
1622929702.289234-UTR-H-elongata_contig11986:3132..32011622929702.289234-UTR-H-elongata_contig11986:3132..3201Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11986 3133..3201 +
1691679124.7772784-UTR-H-elongata_contig11986:3132..32011691679124.7772784-UTR-H-elongata_contig11986:3132..3201Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11986 3133..3201 +
1622929702.3748925-UTR-H-elongata_contig11986:4900..52441622929702.3748925-UTR-H-elongata_contig11986:4900..5244Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11986 4901..5244 +
1691679124.8418689-UTR-H-elongata_contig11986:4900..52441691679124.8418689-UTR-H-elongata_contig11986:4900..5244Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11986 4901..5244 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929702.3077595-CDS-H-elongata_contig11986:3201..32391622929702.3077595-CDS-H-elongata_contig11986:3201..3239Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11986 3202..3239 +
1691679124.7870584-CDS-H-elongata_contig11986:3201..32391691679124.7870584-CDS-H-elongata_contig11986:3201..3239Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11986 3202..3239 +
1622929702.3318722-CDS-H-elongata_contig11986:3679..37941622929702.3318722-CDS-H-elongata_contig11986:3679..3794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11986 3680..3794 +
1691679124.803288-CDS-H-elongata_contig11986:3679..37941691679124.803288-CDS-H-elongata_contig11986:3679..3794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11986 3680..3794 +
1622929702.3489342-CDS-H-elongata_contig11986:4119..41791622929702.3489342-CDS-H-elongata_contig11986:4119..4179Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11986 4120..4179 +
1691679124.82059-CDS-H-elongata_contig11986:4119..41791691679124.82059-CDS-H-elongata_contig11986:4119..4179Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11986 4120..4179 +
1622929702.3621569-CDS-H-elongata_contig11986:4573..49001622929702.3621569-CDS-H-elongata_contig11986:4573..4900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11986 4574..4900 +
1691679124.832519-CDS-H-elongata_contig11986:4573..49001691679124.832519-CDS-H-elongata_contig11986:4573..4900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11986 4574..4900 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11986.1533.1

>prot_H-elongata_contig11986.1533.1 ID=prot_H-elongata_contig11986.1533.1|Name=mRNA_H-elongata_contig11986.1533.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
MAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICE
RFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAE
CGQIRDEDEGEKINEDEGEEDKERRSGGKRQRVRFAESDDVSGERRDGPV
GEDVVEGAGSVSAIDEGRRNGRVRIEEDE*
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mRNA from alignment at H-elongata_contig11986:1391..5244+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11986.1533.1 ID=mRNA_H-elongata_contig11986.1533.1|Name=mRNA_H-elongata_contig11986.1533.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3854bp|location=Sequence derived from alignment at H-elongata_contig11986:1391..5244+ (Himanthalia elongata Himel1 dioecious)
CGCGCCTGGGAGCTGGAGGTAGACGCCGACGAGGACTCCGAAACGGCGGC CCCGAGCGAGGCGTTTCTCTCCCTTCAGAAAGAGCTTGACGAGAAGGAGA AGATACAACGGGAGAACGAACACAGGGCCGAGAAACAAGAGGCGCTCATC GCGAACGCGGCTAAACGTTTGCAAGAAAAGGTGAGCTTCTCCTCCTCCTA CCCTCTCTTGCCAGCGTATACAAGAGTTTACCTAGCGTGCAACGTGCGAA GCTAAGGCGTGATGCGGGCGTGCGAGCTCAGAAGCAGTGGACTGCAACGA ATGGGTTCTTGTGTACTGTTCTATAAACGGGCTCTCTTCAGCGATATTCA CCTCCATCCCTCTCGTTTTCAACAATGCGCACGCTCTCTGTACGTTTCCG TCTTACGACAATCAGGAGAAGCTCCGCCGAGTGAATGCGAAGAACCCGAA GGTGTTTCTCGACATCGAGATAGCGGACGTCACAGGCGCCGGGAGTCGGT TACGGAAAGGCACCAACATCGGTCGAATTACCATCGAAGTTTTTGAAGAT GCTCTGCCTCAAACAGCGGAGAATTTTCGCGCGTTATGTACGGGAGAAAA GGTGGGATACCTACGGACGTTGCCCTTATTTAATATCAGCAGTGACGTAT GTGTGACATGGGAGGAGTAGAGAGGTCCTTCCTAGCCCTAGGCGACCGTT CAGAAGTTCGAATTAGTCAATTCTTGCTGCCATCGGGCGCTGTCAGGGCT TCCTTCTGACCCAGACCGCAAGGTTCGGTCAACCCCCCATATGTCATGTG TTGGGCGGGTCACAACAATCACAAGTTGATCAAGGCGTTATCGTCTTGAT TGCTGTTCTTGCAGCCTCGCATCCCTTCTTATCATTTGTCCGCTTGTGCT GCATTGCATCTCCTAAACATTACAATAGTTCAAGGTGTTTTTTAAAATAA AAACAACCCTGGGCTGGGTGGGCTGGGAGTAGATTGGAAGCAGTCACGGT TAGACTATTAATATTGCCAATTTTTACCATGTGCTCCGCATCATTGTGCG ACTCTCAACATTCAGTGACGAGCACTCCCCACGTTACACCCTGCAGTCGC AAAGTTTTTACGTTTTTCGTCCTGATAACCCAACAGCACATTGTGTGCGG AAATTTCAAATTTCAAATTTCCCCCCGAAACTATTATAATAACTTTTTAC GAAGCCTAAAATTTGATGTAAATTTTCCGACAGGTTTAGTAATTATGAGC TTAGGCGGAGTAGCTATGATACTGTGCTACTCCGGTAAACCTGGTACGTC CGTGTAGGTGATAGAGCGAACTAAATCGTACTATGTCTAGAGTATGAGAC ACCCGGGAACGAAAATCCCCCTCCTCTTCTTTCTCGAAAAGTATTTATAA TATCTCGGCCAATGATCCACGAAACACCGCGATTTTGGGAACTCTAGTGA AGGTGCCGCCCAGCACTTCTGTCCCCTAGTTTTTCGGCACTATTCGGCAG GAGAAACCGATCAATTTCAAAAGAAAGGGTGAGAAATACGGCTAGAATAC TTGGTACCCTTTCACCTGCGGTACATAACTTTTGACGTCTAGCCCACCCG AGAACACTTCCGCTCGATCGGACATCCTCCGCTACGATACACTAGAAGAG ATAAAAGATTTCACATCACGACTCTGATCGAACATGACCATCCCATTGTC TATCCTCTCGACCCTCCACGTGATGGCTTTCGCGAGGAGCAGCCGCGAGG CGCAAGTGGATTTCCGCTGAGCTACCTGGGTAATATCTTCCACAGGATCG TACCCAAGTTCATGGCACAAGGTGGAGATATCACAAGGGAAGACGGAAGG TATAAAATAGTGGCTCCCAGGACCTGGCAACTTTGTTCACTTTTGCTTGC TTTAGGGGAAGCATGGTGTGCCTTCGAGCGACCGAGCGTTGAAAGAGAAA CCGGAAGGAAGCCATCACACGCCGCCGTCGTCGGTCGCTTCGGGTGATAT TCGATTCGATTTTTTTACGTGGTAGGGCTTCACACCTCCTACGTCACAGT GATTGCTGCCGAAATGTCACCTCAGCTTTTCACAGAGGGTCACAAGAACT TCGCGGAAGACGATAAGAAATCGTTGGACCTTGCATTTTTTTTGTTCCCC CCTCGTCGTTTTCCCGCGAGTCCACGCTCGGCTGCTTTTCCTGACGTACC CTATATCCCGCGTGTTTTGCCTCCCGGCTCCTTTTTCGCGTTCGTTCGTG CCGCGATATATTTCTCTCTCTGTGCGAGGTTCGCCGCAGCGGGGGGGAGT CCATCTACGGGCCGACCTTCGCGGATGAGAGCTTCGGGATGAAGCACGAC CGGCCCGGGTTGCTCTCTATGGCGAACTCAGGCAAAGCGTTTATCTGCGA AAGAGTGCGGTTGCGCAATGGGCGGCGTCGACCGCGAGCTGCTAGCGTGC AGTCGCGCACCCGATATTCCTTGGCGATGGCGTGTGTTCGGACAAAGTGT GATGGCGATGGCGTGTGTGTGGGCTGGTGATTTGAAGGCGAGCTCCTTGG TTCGGCTGTTCCGAGAACGCTTCAGGCAGGATATTAATTTCGTTGTTCGT CGCTTCGAGCTCTCTGTTATAATTCCCCAATATGCGCCCGGGCTCTGCCG GTTGTCATGTCATCCTATAATTGGCTCCCGCCGCGTATCCGAAACGTTTT GACCAGGCCGAAACACCAACAACTCCCAGTTCTTCATTACTTTTAATCCG CTGCCGTGGCTGGACTCCAAACACGTGGTCTTCGGAAAGGTACTACTGTA GACATTCAATTGAGGCGCGTTTCTTCGTGTACATTCGAGTACGTTGCCCC TTTTTTTTTGCGAAGCGCGTGGAAAGTGATCGCGATCGCAGCCTTTGTAT CGTCTTGGTGTGGAGAAATCTTTGCTTCTCTCTCCTTGGCATGGGAGCCA TAGAGATCGCTGGGGCTGGAGTTCTTCAAGAAACATGCCCGTCGCTCCCA CGGGATAGATTCGACGATGAACGATCCTACGAGAAAAACACTTTAGTTCG CGACTCACCGTGTGCATATGCATCTCTAGCGTAAAGGCCAATCCTTGATC GTAATGGTGATGGTGGCCGTGTGAGGGCGGGGCGAGGGATGATGCCTCAC CGCTTTATTTTGGACCCCGTCCCTCCTGGTCAGGTTGTGGACGGCATGGA GATTGTGCGTAAGATCGAGGACTGCGGCACGAGCTCGGGAGAGCCGACCA AGAGGGTGCAAATCGCCGAGTGCGGTCAGATCCGTGATGAGGACGAGGGG GAAAAAATCAACGAAGACGAGGGCGAAGAGGACAAGGAGCGCCGGAGCGG GGGGAAGCGGCAGAGAGTACGATTTGCGGAGAGCGATGATGTCTCGGGCG AGAGGAGAGATGGTCCCGTTGGGGAGGATGTCGTCGAAGGCGCAGGAAGC GTGTCAGCGATAGACGAAGGTAGGCGGAATGGTAGGGTGAGAATCGAGGA AGATGAATAGGATCATTCCAAGGATCTGTAACCTATGTACGTATTTTGCC CAATCCGCTTGACGGCCGTGGTAACCCATGGATCAGGGTGAATATTTGTG GTGTTGGTTTTGCGGGGAAGGATCCACCCGCGCTACTATAATAGTGTTCG ATGTCGACGGTGCGGGCAACTTGGTTGGGATATATCCGCGCCGCAATACT AGTAATAGGGAGGAACAACGCTGCTACGTTATCATGCAATCTGGAGAGCT GTCTGCGAGGAGTTTTGTAAAAGGCCAAGCGATCTGAGTTTTGTTTCGGC TCGGCGAGGATTGATGATCCTCTTGGGTAAACTGTAGACTGAACTGGACT GGAC
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Coding sequence (CDS) from alignment at H-elongata_contig11986:1391..5244+

>mRNA_H-elongata_contig11986.1533.1 ID=mRNA_H-elongata_contig11986.1533.1|Name=mRNA_H-elongata_contig11986.1533.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1080bp|location=Sequence derived from alignment at H-elongata_contig11986:1391..5244+ (Himanthalia elongata Himel1 dioecious)
ATGGCACAAGGTGGAGATATCACAAGGGAAGACGGAAGATGGCACAAGGT
GGAGATATCACAAGGGAAGACGGAAGCGGGGGGGAGTCCATCTACGGGCC
GACCTTCGCGGATGAGAGCTTCGGGATGAAGCACGACCGGCCCGGGTTGC
TCTCTATGGCGAACTCAGGCAAAGCGTTTATCTGCGAAAGACGGGGGGGA
GTCCATCTACGGGCCGACCTTCGCGGATGAGAGCTTCGGGATGAAGCACG
ACCGGCCCGGGTTGCTCTCTATGGCGAACTCAGGCAAAGCGTTTATCTGC
GAAAGATTCTTCATTACTTTTAATCCGCTGCCGTGGCTGGACTCCAAACA
CGTGGTCTTCGGAAAGTTCTTCATTACTTTTAATCCGCTGCCGTGGCTGG
ACTCCAAACACGTGGTCTTCGGAAAGGTTGTGGACGGCATGGAGATTGTG
CGTAAGATCGAGGACTGCGGCACGAGCTCGGGAGAGCCGACCAAGAGGGT
GCAAATCGCCGAGTGCGGTCAGATCCGTGATGAGGACGAGGGGGAAAAAA
TCAACGAAGACGAGGGCGAAGAGGACAAGGAGCGCCGGAGCGGGGGGAAG
CGGCAGAGAGTACGATTTGCGGAGAGCGATGATGTCTCGGGCGAGAGGAG
AGATGGTCCCGTTGGGGAGGATGTCGTCGAAGGCGCAGGAAGCGTGTCAG
CGATAGACGAAGGTAGGCGGAATGGTAGGGTGAGAATCGAGGAAGATGAA
TAGGTTGTGGACGGCATGGAGATTGTGCGTAAGATCGAGGACTGCGGCAC
GAGCTCGGGAGAGCCGACCAAGAGGGTGCAAATCGCCGAGTGCGGTCAGA
TCCGTGATGAGGACGAGGGGGAAAAAATCAACGAAGACGAGGGCGAAGAG
GACAAGGAGCGCCGGAGCGGGGGGAAGCGGCAGAGAGTACGATTTGCGGA
GAGCGATGATGTCTCGGGCGAGAGGAGAGATGGTCCCGTTGGGGAGGATG
TCGTCGAAGGCGCAGGAAGCGTGTCAGCGATAGACGAAGGTAGGCGGAAT
GGTAGGGTGAGAATCGAGGAAGATGAATAG
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