mRNA_H-elongata_contig11986.1533.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: D7G2J2_ECTSI (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2J2_ECTSI) HSP 1 Score: 295 bits (754), Expect = 1.260e-93 Identity = 161/257 (62.65%), Postives = 188/257 (73.15%), Query Frame = 1
Query: 1 RAWELEVDADEDSE--TAAPSEAFLSLQKELDEKEKIQRENEHRAEKQEALIANAAKRLXXXXXXXRVNAKNPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIV--PKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQIRDED 759
RAWE++V+AD+ E PSEAFLSLQ+EL+EKEKIQ+EN RA+ Q+AL A AA L + N KNP+VFLDIEIAD TGA SRL KG N GR+T+E+FE+A+P+TAENFRALCTGEK G ++ G V P GGESIYGPTF DESF +KHD+PGLLSMANSG+ +FFITF PLPWLDSKHVVFGKVV+GME+VRKIEDCGT+SGEPTKRVQIAECGQI DE+
Sbjct: 15 RAWEVDVEADDKDEGDDTTPSEAFLSLQRELEEKEKIQQENAERAKNQDALAAEAANSLRRKEEVRKANTKNPRVFLDIEIADTTGAKSRLAKGKNAGRVTLELFENAVPRTAENFRALCTGEKV-GRERESDTWCGATSRTEVKPPDLNLTAYPPCPRCSCGGESIYGPTFVDESFQLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQIPDEE 270
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A0A146LV45_LYGHE (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LV45_LYGHE) HSP 1 Score: 212 bits (539), Expect = 1.320e-63 Identity = 100/181 (55.25%), Postives = 130/181 (71.82%), Query Frame = 1
Query: 205 KNPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
K +VF DIEI +GR+T ++F+D +P+TAENFRALCTGEK +GASG PL + +IFHR++P FM QGGD TR +G+GGESIYG FADE+F ++HD+PGLLSMAN+G +FFIT P PWLD KHVVFG+V DG +IV+KIE GT++G P R+ I +CG++
Sbjct: 10 KMKRVFFDIEIGQKA-----------VGRVTFKLFDDVVPKTAENFRALCTGEKGKGASGKPLHFKNSIFHRVIPDFMIQGGDFTRHNGTGGESIYGEKFADENFRLRHDKPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGQVEDGFDIVKKIEQQGTANGSPRTRIVITDCGEL 179
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A2DT06_TRIVA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2DT06_TRIVA) HSP 1 Score: 209 bits (533), Expect = 8.560e-63 Identity = 99/182 (54.40%), Postives = 126/182 (69.23%), Query Frame = 1
Query: 205 KNPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQIR 750
K PK F DI I +G +G+I E+F D +P+TAENFRALCTGEK G SG PLSY G +FHRI+P+FM QGGD TR +G+GGESIYG F DE+F +KHD+PGLLSMAN+G +FFIT PWLD H VFG+V++GM+IV++IE CGT SG P + +CG+++
Sbjct: 3 KRPKTFFDISI-----------RGDKVGKIVFELFNDIVPKTAENFRALCTGEKGIGKSGMPLSYKGTMFHRIIPQFMIQGGDFTRFNGTGGESIYGMKFDDENFKVKHDKPGLLSMANAGPNTNGSQFFITTVETPWLDGHHCVFGQVIEGMDIVKQIESCGTESGRPRAMCMVTDCGEMK 173
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: UPI0018FE4581 (peptidylprolyl isomerase n=1 Tax=Streptomyces sp. NRRL F-5126 TaxID=1463857 RepID=UPI0018FE4581) HSP 1 Score: 209 bits (532), Expect = 1.090e-62 Identity = 100/180 (55.56%), Postives = 128/180 (71.11%), Query Frame = 1
Query: 208 NPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
NP+V+ D+ + DV GRIT E+F D +P+TAENFRALCTGE+ G SG PL + G+ FHR++P+FM QGGD TR DG+GGESIYG FADE+F +KHD PG+LSMAN+G+ +FFI P PWLD KHVVFGKV+D ME+V+ IE G+ +G+ TK V I+ CGQ+
Sbjct: 2 NPRVYFDMTVGDVAA-----------GRITFELFADVVPKTAENFRALCTGERGVGKSGKPLHFEGSKFHRVIPQFMCQGGDFTRGDGTGGESIYGGKFADENFDLKHDVPGILSMANAGRNTNGSQFFICTVPTPWLDGKHVVFGKVIDNMELVKTIESVGSQNGKTTKDVVISACGQL 170
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: D6AXE0_9ACTN (Peptidyl-prolyl cis-trans isomerase n=36 Tax=Streptomyces TaxID=1883 RepID=D6AXE0_9ACTN) HSP 1 Score: 208 bits (530), Expect = 2.250e-62 Identity = 100/180 (55.56%), Postives = 127/180 (70.56%), Query Frame = 1
Query: 208 NPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
NP+VF DIE GT++GR+T E+F D +P+TAENFRALCTGEK G G PL + G+ FHR++P FM QGGD TR +G+GGESIYG FADE+F +KHD PG+LSMAN+G +FFI P PWLD KHVVFGKV+DGM+ V+ IE G+ SG+ + + I++CGQI
Sbjct: 3 NPQVFFDIEA-----------NGTSLGRVTFELFADVVPKTAENFRALCTGEKGNGRQGKPLHFKGSGFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFADENFQLKHDTPGILSMANAGPHSNGSQFFICTEPTPWLDGKHVVFGKVLDGMDTVKAIESHGSRSGKTSATLTISDCGQI 171
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A0A388MFL0_CHABU (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MFL0_CHABU) HSP 1 Score: 207 bits (526), Expect = 9.210e-62 Identity = 100/180 (55.56%), Postives = 125/180 (69.44%), Query Frame = 1
Query: 208 NPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
NP VF DI I G +GRI +E++++ +P+TAENFRALCTGEK G SG PL Y G FHR++PKFM QGGD TR DG+GGESIYG FADE+F KH PG+LSMAN+G +FF+ P PWLD KHVVFGKV+ GM++V K+E G+SSG ++ V IA+CGQ+
Sbjct: 3 NPTVFFDITIG-----------GRKVGRIVMELYKNVVPRTAENFRALCTGEKGTGRSGRPLHYKGCTFHRVIPKFMCQGGDFTRGDGTGGESIYGAKFADENFQHKHTEPGVLSMANAGPNTNGSQFFLCTVPTPWLDGKHVVFGKVIQGMDVVAKVESVGSSSGRTSQPVVIADCGQL 171
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A0A455B6L4_PHYMC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Physeter macrocephalus TaxID=9755 RepID=A0A455B6L4_PHYMC) HSP 1 Score: 206 bits (524), Expect = 1.890e-61 Identity = 105/182 (57.69%), Postives = 127/182 (69.78%), Query Frame = 1
Query: 202 AKNPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
AKNP+VF DI I G GRI E+F++ +P+TAENFRALCTGEK RG SG PLSY G FHRI+P+FM QGGD T +G+GGESIYG FADE+F +KH P LLSMANSG +FFIT P PWLD KHVVFGKVV+G ++V+++E GT SG + V IA+CGQ+
Sbjct: 2 AKNPQVFFDITIG-----------GKPAGRIVFELFKNIVPRTAENFRALCTGEKGRGVSGKPLSYKGCSFHRIIPEFMCQGGDFTNFNGTGGESIYGMKFADENFELKHTEPFLLSMANSGPNTNGSQFFITTVPCPWLDGKHVVFGKVVEGTDVVKQMEQQGTRSGTVKQPVVIADCGQL 172
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A0A1Q3BFI6_CEPFO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BFI6_CEPFO) HSP 1 Score: 206 bits (523), Expect = 2.760e-61 Identity = 102/182 (56.04%), Postives = 127/182 (69.78%), Query Frame = 1
Query: 208 NPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQIRD 753
NPKVF DI I + GRI +E+F DA P+TAENFRALCTGE+ G+SG PL Y G+ FHRI+P FM QGGD TRE+G+GGESIYG FADE+F MKH PG+LSMAN+G +FFI PWLD KHVVFGKVVDG +V+++E+ G+ SG ++ V I +CGQI++
Sbjct: 3 NPKVFFDILIGKMKA-----------GRIVMELFADATPKTAENFRALCTGERGIGSSGKPLHYKGSPFHRIIPNFMCQGGDFTRENGTGGESIYGSKFADENFKMKHTGPGVLSMANAGPNTNGSKFFICTKKTPWLDGKHVVFGKVVDGYSVVKEMEEVGSDSGSTSESVVIEDCGQIKE 173
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A0A1Z3HTG9_9CYAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HTG9_9CYAN) HSP 1 Score: 206 bits (523), Expect = 2.760e-61 Identity = 102/183 (55.74%), Postives = 129/183 (70.49%), Query Frame = 1
Query: 199 NAKNPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
++ NP+VF DI I G GRI IE+ D PQTAENFRALCTGE+ GASG PL + G+ FHRI+P FM QGGD TR +G+GGESIYG TFADE+F +KH PG+LSMAN+G +FF+T PWLD KHVVFG VV+GM++V+++E G+SSG+P + V IA+CGQ+
Sbjct: 3 DSTNPQVFFDITIG-----------GQPAGRIVIELRTDVTPQTAENFRALCTGEQGTGASGKPLHFKGSSFHRIIPDFMCQGGDFTRGNGTGGESIYGRTFADENFELKHTGPGILSMANAGPGTNGSQFFLTTVATPWLDGKHVVFGHVVEGMDVVKRMEAVGSSSGKPRQPVVIADCGQL 174
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Match: A0A0C9RX79_9SPER (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0C9RX79_9SPER) HSP 1 Score: 205 bits (522), Expect = 3.650e-61 Identity = 102/180 (56.67%), Postives = 122/180 (67.78%), Query Frame = 1
Query: 208 NPKVFLDIEIADVTGAGSRLRKGTNIGRITIEVFEDALPQTAENFRALCTGEKPRGASGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICERFFITFNPLPWLDSKHVVFGKVVDGMEIVRKIEDCGTSSGEPTKRVQIAECGQI 747
N KVF ++++ G GRI IE+F D P+TAENFRALCTGEK G SG PL Y G+IFHR++P FM QGGD TR DG+GGESIYG FADE+F KH PG+LSMAN+G +FFI PWLD KHVVFG+V +GME+VR IE G+S G +K V IA+CGQI
Sbjct: 3 NSKVFFEMQVG-----------GNPAGRIVIELFGDVTPKTAENFRALCTGEKGMGRSGKPLHYKGSIFHRVIPGFMCQGGDFTRGDGTGGESIYGSKFADENFAKKHTGPGILSMANAGPHTNGSQFFICTEQTPWLDGKHVVFGQVTEGMEVVRAIEKVGSSGGRTSKEVIIADCGQI 171 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11986.1533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11986.1533.1 >prot_H-elongata_contig11986.1533.1 ID=prot_H-elongata_contig11986.1533.1|Name=mRNA_H-elongata_contig11986.1533.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp MAQGGDITREDGSGGESIYGPTFADESFGMKHDRPGLLSMANSGKAFICEback to top mRNA from alignment at H-elongata_contig11986:1391..5244+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11986.1533.1 ID=mRNA_H-elongata_contig11986.1533.1|Name=mRNA_H-elongata_contig11986.1533.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3854bp|location=Sequence derived from alignment at H-elongata_contig11986:1391..5244+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11986:1391..5244+ >mRNA_H-elongata_contig11986.1533.1 ID=mRNA_H-elongata_contig11986.1533.1|Name=mRNA_H-elongata_contig11986.1533.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1080bp|location=Sequence derived from alignment at H-elongata_contig11986:1391..5244+ (Himanthalia elongata Himel1 dioecious)back to top |