mRNA_H-elongata_contig76601.15329.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig76601.15329.1 vs. uniprot
Match: D7FLS6_ECTSI (Polynucleotide kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLS6_ECTSI) HSP 1 Score: 141 bits (355), Expect = 3.760e-37 Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 1
Query: 1 RWEELMKGSVMRWVPDTRRVSTHILAFDMDGTLIKTKSGKRFGDGEGDWELMYANTSSALKAWYQRGYKVAIVSNQLGVGKGKVDKRSVRQFVPSLI 291
RWEELM+GSV+RWVPD RVSTHI+AFDMDGTLIKTKSGKRFGD DW+L + L+ W+ RGYKVAI+SNQ+GVG GKVD R ++ V S++
Sbjct: 261 RWEELMEGSVLRWVPDRSRVSTHIVAFDMDGTLIKTKSGKRFGDAADDWQLWNGKIPTVLRKWHDRGYKVAIISNQMGVGTGKVDPRMLKAKVRSVV 357
BLAST of mRNA_H-elongata_contig76601.15329.1 vs. uniprot
Match: A0A7R9FRH0_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9FRH0_9CRUS) HSP 1 Score: 84.3 bits (207), Expect = 5.580e-17 Identity = 39/96 (40.62%), Postives = 59/96 (61.46%), Query Frame = 1
Query: 4 WEELMKGSVMRWVPDTRRVSTHILAFDMDGTLIKTKSGKRFGDGEGDWELMYANTSSALKAWYQRGYKVAIVSNQLGVGKGKVDKRSVRQFVPSLI 291
W++ G++M + P + S I A+D+DGT+I TKSG+ F DW ++YA LK RGYK+A ++NQLGV KGKV + +R V +++
Sbjct: 126 WKDEEGGALMVYTPPNIQHSEKIAAYDIDGTIIATKSGRVFATDRNDWRILYAEIPGKLKELASRGYKLAFLTNQLGVAKGKVGREELRGKVEAVV 221
BLAST of mRNA_H-elongata_contig76601.15329.1 vs. uniprot
Match: A0A7R9BK47_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BK47_9CRUS) HSP 1 Score: 81.3 bits (199), Expect = 7.000e-16 Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = 1
Query: 4 WEELMKGSVMRWVPDTRRVSTHILAFDMDGTLIKTKSGKRFGDGEGDWELMYANTSSALKAWYQRGYKVAIVSNQLGVGKGKVDKRSVRQFVPSLI 291
W L ++ W+P S I A+DMDGTLI TKSGK F + DW ++Y+ LK+ Q G+K+ I++NQ GV GKV + ++ + +++
Sbjct: 145 WSSLENDKLLAWMPSGIEHSEKIAAYDMDGTLITTKSGKVFATNKDDWRIIYSEVPKKLKSLVQDGFKIVIMTNQSGVSAGKVTIKDLKSKLEAVV 240
BLAST of mRNA_H-elongata_contig76601.15329.1 vs. uniprot
Match: UPI0006B80884 (uncharacterized protein F21D5.5 n=1 Tax=Bactrocera oleae TaxID=104688 RepID=UPI0006B80884) HSP 1 Score: 80.1 bits (196), Expect = 1.780e-15 Identity = 37/100 (37.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query: 1 RWEELMKGSVMRWVPDTRRVSTHILAFDMDGTLIKTKSGKRFGDGEGDWELMYANTSSALKAWYQRGYKVAIVSNQLGVGKGKVD----KRSVRQFVPSL 288
+WE + GS+M + D + S I +D+DGT+I TKSG F DW+++Y LK+ YQ GYK+ +NQ G+G GK+ KR ++ + L
Sbjct: 155 KWESVGNGSMMVYNDDAVKASNKIAGYDIDGTIITTKSGNVFPKHTDDWQILYPEVPKKLKSLYQSGYKICFFTNQGGIGSGKIKLDDFKRKIKDILKKL 254
BLAST of mRNA_H-elongata_contig76601.15329.1 vs. uniprot
Match: A0A6I9W6P4_9HYME (uncharacterized protein F21D5.5 isoform X1 n=2 Tax=Pogonomyrmex barbatus TaxID=144034 RepID=A0A6I9W6P4_9HYME) HSP 1 Score: 79.3 bits (194), Expect = 3.350e-15 Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query: 1 RWEELMKGSVMRWVPDTRRVSTHILAFDMDGTLIKTKSGKRFGDGEGDWELMYANTSSALKAWYQRGYKVAIVSNQLGVGKGKVD----KRSVRQFVPSL 288
+W+ + G ++ + P + I A+DMDGTLIKTKSG F DW+L+Y + + LK +Y GYK+ I +NQ G+ GK+ KR + + V +
Sbjct: 185 KWDSISNGKLLIYTPPSLPNCAKIAAYDMDGTLIKTKSGLVFPKDCNDWQLLYPDIPNKLKQFYTNGYKIVIFTNQAGLSSGKIKINDFKRKIERIVQKI 284
BLAST of mRNA_H-elongata_contig76601.15329.1 vs. uniprot
Match: UPI0015B075F3 (bifunctional polynucleotide phosphatase/kinase-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015B075F3) HSP 1 Score: 79.0 bits (193), Expect = 3.760e-15 Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query: 1 RWEELMKGSVMRWVPDTRRVSTHILAFDMDGTLIKTKSGKRFGDGEGDWELMYANTSSALKAWYQRGYKVAIVSNQLGVGKGKVD----KRSVRQFVPSL 288
RWEE + + P R T I AFDMD T+I TKSGK F DW+++YA +K Y+ GYK+ + +NQ G+ +G+ K+ V + V L
Sbjct: 17 RWEEYDHSKIFIFTPAGLRGQTKIAAFDMDHTIITTKSGKVFPTDMSDWKILYAEVPGKMKKLYEEGYKIVVFTNQKGISRGRTSAPEFKKKVERIVQKL 116
BLAST of mRNA_H-elongata_contig76601.15329.1 vs. uniprot
Match: UPI000E6E4103 (uncharacterized protein F21D5.5-like n=2 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E4103) HSP 1 Score: 78.6 bits (192), Expect = 5.380e-15 Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 1
Query: 4 WEELMKGSVMRWVPDTRRVSTHILAFDMDGTLIKTKSGKRFGDGEGDWELMYANTSSALKAWYQRGYKVAIVSNQLGVGKGKVDKRSVRQFVPSLI 291
WE++ G ++ + S+ I A+D+DGTLIKTKSG F + DW++ + LK +GYK+ I +NQ G+GKGK D + + V +++
Sbjct: 43 WEDVSNGKLLIFTKSGVTASSKIAAYDLDGTLIKTKSGLVFAKNKDDWQIAFKQIPKHLKELETQGYKLVIFTNQAGIGKGKTDPKEFKGKVEAIL 138
BLAST of mRNA_H-elongata_contig76601.15329.1 vs. uniprot
Match: UPI000E6E51B5 (uncharacterized protein F21D5.5-like n=1 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E51B5) HSP 1 Score: 78.6 bits (192), Expect = 6.240e-15 Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 1
Query: 4 WEELMKGSVMRWVPDTRRVSTHILAFDMDGTLIKTKSGKRFGDGEGDWELMYANTSSALKAWYQRGYKVAIVSNQLGVGKGKVDKRSVRQFVPSLI 291
WE++ G ++ + S+ I A+D+DGTLIKTKSG F + DW++ + LK +GYK+ I +NQ G+GKGK D + + V +++
Sbjct: 181 WEDVSNGKLLIFTKSGVTASSKIAAYDLDGTLIKTKSGLVFAKNKDDWQIAFKQIPKHLKELETQGYKLVIFTNQAGIGKGKTDPKEFKGKVEAIL 276
BLAST of mRNA_H-elongata_contig76601.15329.1 vs. uniprot
Match: A0A182JRT7_9DIPT (FHA_2 domain-containing protein n=1 Tax=Anopheles christyi TaxID=43041 RepID=A0A182JRT7_9DIPT) HSP 1 Score: 78.2 bits (191), Expect = 8.560e-15 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 61 STHILAFDMDGTLIKTKSGKRFGDGEGDWELMYANTSSALKAWYQRGYKVAIVSNQLGVGKGKVDKRSVRQFVPSLI 291
S + A+DMDGTLIKTKSG F DW++ +A + LK+ ++ GYK+ I +NQ G+GKGKV RQ + SL+
Sbjct: 211 SEKVAAYDMDGTLIKTKSGNVFPKSIDDWQIAFAEVPAKLKSLHRNGYKLVIFTNQAGIGKGKVRIEDFRQKIESLV 287
BLAST of mRNA_H-elongata_contig76601.15329.1 vs. uniprot
Match: A0A1S4H8L3_ANOGA (FHA_2 domain-containing protein n=10 Tax=gambiae species complex TaxID=44542 RepID=A0A1S4H8L3_ANOGA) HSP 1 Score: 78.2 bits (191), Expect = 8.600e-15 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 61 STHILAFDMDGTLIKTKSGKRFGDGEGDWELMYANTSSALKAWYQRGYKVAIVSNQLGVGKGKVDKRSVRQFVPSLI 291
S + A+DMDGTLIKTKSG F DW++ +A + LK+ ++ GYK+ I +NQ G+GKGKV RQ + SL+
Sbjct: 244 SEKVAAYDMDGTLIKTKSGNVFPKSIDDWQIAFAEVPAKLKSLHRNGYKLVIFTNQAGIGKGKVRIEDFRQKIESLV 320 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76601.15329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76601.15329.1 >prot_H-elongata_contig76601.15329.1 ID=prot_H-elongata_contig76601.15329.1|Name=mRNA_H-elongata_contig76601.15329.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp MKGSVMRWVPDTRRVSTHILAFDMDGTLIKTKSGKRFGDGEGDWELMYANback to top mRNA from alignment at H-elongata_contig76601:891..2266- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76601.15329.1 ID=mRNA_H-elongata_contig76601.15329.1|Name=mRNA_H-elongata_contig76601.15329.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1376bp|location=Sequence derived from alignment at H-elongata_contig76601:891..2266- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76601:891..2266- >mRNA_H-elongata_contig76601.15329.1 ID=mRNA_H-elongata_contig76601.15329.1|Name=mRNA_H-elongata_contig76601.15329.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=552bp|location=Sequence derived from alignment at H-elongata_contig76601:891..2266- (Himanthalia elongata Himel1 dioecious)back to top |