prot_H-elongata_contig75378.15222.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75378.15222.1
Unique Nameprot_H-elongata_contig75378.15222.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length164
Homology
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BLAST of mRNA_H-elongata_contig75378.15222.1 vs. uniprot
Match: D8LNR5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR5_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 6.850e-71
Identity = 115/160 (71.88%), Postives = 132/160 (82.50%), Query Frame = 0 
Query:    1 MADEDKKPRHKMGADELLEETHSAIGKIIHLLESNGLAAESVEHLTSLDKKPQPDLMGTLDFASRLGFTMPDVPHQQLVTMLFNAWDCLVYKTGHTRKLMYRKVVRLLEADNKTEADTLDRWKRERDKADRESAKANVAFVTMREIVKSFQNVSEDESVG 160
            MADED+KPRH++GADELLEET  A  KI++LLE NGLAAES+EHLTSL K    D MG+L+ A RLG +MPDVPH  LV +L +AWDC+VYKTGHTRK MYRKV RLLEADNKTE DTLDRWK ERDKA+RESAKANVA+VTMREI KSF+   ++E  G
Sbjct:    1 MADEDRKPRHRLGADELLEETQGASAKIVNLLEVNGLAAESIEHLTSLTKGG--DFMGSLNLARRLGLSMPDVPHNDLVVLLLDAWDCVVYKTGHTRKQMYRKV-RLLEADNKTEPDTLDRWKGERDKAERESAKANVAYVTMREIAKSFKEEPQEEGEG 157
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BLAST of mRNA_H-elongata_contig75378.15222.1 vs. uniprot
Match: A0A835ZPP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPP5_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.980e-27
Identity = 66/155 (42.58%), Postives = 95/155 (61.29%), Query Frame = 0 
Query:    1 MADE---DKKPRHKMGADELLEETHSAIGKIIHLLESNGLAAESVE---HLTSLDKKPQPDLMGTLDFASRLGFTMPDVPHQQLVTMLFNAWDCLVYKTGHTRKLMYRKVVRLLEADNKTEADTLDRWKRERDKADRESAKANVAFVTMREIVKS 149
            M+DE   +KKPR +M A+ELLEET  A+ K +  LESNGL A SVE   HLTS            L     LGFTMP + H   + ML + W+C+     ++R+  YRKV R+LEAD KT+ + L +W  +R + D+ESA  N++++ MR+I+++
Sbjct:    1 MSDEPAGEKKPRTRMNAEELLEETSQAMEKAVAFLESNGLHAASVENVRHLTSALAWSD-----ALHLTQSLGFTMPHIDHDAFIVMLLDTWECVAQMKLNSRRACYRKV-RVLEADQKTDPEVLAKWLADRARVDKESAATNLSYIKMRQILRA 149
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75378.15222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNR5_ECTSI6.850e-7171.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZPP5_9STRA1.980e-2742.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 105..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75378contigH-elongata_contig75378:1141..2772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75378.15222.1mRNA_H-elongata_contig75378.15222.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75378 1141..2772 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75378.15222.1 ID=prot_H-elongata_contig75378.15222.1|Name=mRNA_H-elongata_contig75378.15222.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
MADEDKKPRHKMGADELLEETHSAIGKIIHLLESNGLAAESVEHLTSLDK
KPQPDLMGTLDFASRLGFTMPDVPHQQLVTMLFNAWDCLVYKTGHTRKLM
YRKVVRLLEADNKTEADTLDRWKRERDKADRESAKANVAFVTMREIVKSF
QNVSEDESVGGKH*
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