prot_H-elongata_contig75364.15221.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75364.15221.1
Unique Nameprot_H-elongata_contig75364.15221.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
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BLAST of mRNA_H-elongata_contig75364.15221.1 vs. uniprot
Match: D7FLK3_ECTSI (AAA ATPase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK3_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 7.950e-39
Identity = 84/118 (71.19%), Postives = 92/118 (77.97%), Query Frame = 0 
Query:    1 MVVSRCATELREGTPRCSTVPDAAWYKCFVCRAQGYPDPAPKPPIDERWVGSCVAVLAPLVGPEARRILA-ARSRPAVLLHGPATAEGG-SLVEAAAERLGLHVRTVAMRAVLGGAAH 116
            MVVS+  TELREG P CS VP+   Y+ FVCRA GYP P  KPP DER V + VA LAP+VGPEA R+L  ARSRPAVLLHGP  AEGG SLVEAAAERLG+HVRTVAMR+VLG A H
Sbjct:  406 MVVSQRVTELREGGPICSPVPETLRYQRFVCRANGYPCPEAKPPFDERCVEAVVAALAPVVGPEAFRLLVVARSRPAVLLHGPGAAEGGGSLVEAAAERLGMHVRTVAMRSVLGSAPH 523
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BLAST of mRNA_H-elongata_contig75364.15221.1 vs. uniprot
Match: A0A6H5JDF2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDF2_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.320e-30
Identity = 83/167 (49.70%), Postives = 94/167 (56.29%), Query Frame = 0 
Query:    1 MVVSRCATELREGTPRCSTVPDAAWYKCFVCRAQGYPDPAPKPPI-------------------------------------------------DERWVGSCVAVLAPLVGPEARRILA-ARSRPAVLLHGPATAEGG-SLVEAAAERLGLHVRTVAMRAVLGGAAH 116
            MVVS+  TELREG P CS VP+ + Y+ FVCRA G+P PA KPP                                                  DER V + VA LAP+VGPEA R+L  ARSRPAVLLHGP  A+GG SLVEAAAERLG+HVRTVAMR+VLG A H
Sbjct:  346 MVVSQRVTELREGGPVCSPVPEISRYQQFVCRANGFPCPATKPPFALLRMEMSKISKCNGAVRAYIKQCGWSAVAGRCLHARTGNVARHDNSSTDERCVEAVVAALAPVVGPEAFRLLVVARSRPAVLLHGPGAAQGGGSLVEAAAERLGMHVRTVAMRSVLGSAPH 512
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75364.15221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLK3_ECTSI7.950e-3971.19AAA ATPase domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JDF2_9PHAE1.320e-3049.70AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75364contigH-elongata_contig75364:1678..2696 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75364.15221.1mRNA_H-elongata_contig75364.15221.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75364 1670..2696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75364.15221.1 ID=prot_H-elongata_contig75364.15221.1|Name=mRNA_H-elongata_contig75364.15221.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
MVVSRCATELREGTPRCSTVPDAAWYKCFVCRAQGYPDPAPKPPIDERWV
GSCVAVLAPLVGPEARRILAARSRPAVLLHGPATAEGGSLVEAAAERLGL
HVRTVAMRAVLGGAAHGIV
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