mRNA_H-elongata_contig75122.15192.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig75122.15192.1 vs. uniprot
Match: D7FI53_ECTSI (SMK-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI53_ECTSI) HSP 1 Score: 191 bits (484), Expect = 2.420e-55 Identity = 93/102 (91.18%), Postives = 99/102 (97.06%), Query Frame = 1
Query: 10 LKVSRGHICDLLSFCVRSHTYRMKYFVLRNNVVSRVLRLLSCREKSLQLSAIRFLRSCVGIKDDFYNRYLVKNNLLAPVFGLFRENRGRDNLINSAIIELVE 315
L+VSRGHICDLLSFCVRSHT+RMKYFVLRNNVVSRVLRLLSC +K LQLSA+RFLRSCVGIKD+FYNRYLVKNNLLAPVF LFRENRGRDNLINSA+IELVE
Sbjct: 518 LQVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLINSAVIELVE 619
BLAST of mRNA_H-elongata_contig75122.15192.1 vs. uniprot
Match: A0A6H5KKJ6_9PHAE (SMK-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ6_9PHAE) HSP 1 Score: 191 bits (484), Expect = 5.300e-54 Identity = 93/102 (91.18%), Postives = 99/102 (97.06%), Query Frame = 1
Query: 10 LKVSRGHICDLLSFCVRSHTYRMKYFVLRNNVVSRVLRLLSCREKSLQLSAIRFLRSCVGIKDDFYNRYLVKNNLLAPVFGLFRENRGRDNLINSAIIELVE 315
L+VSRGHICDLLSFCVRSHT+RMKYFVLRNNVVSRVLRLLSC +K LQLSA+RFLRSCVGIKD+FYNRYLVKNNLLAPVF LFRENRGRDNLINSA+IELVE
Sbjct: 590 LQVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLINSAVIELVE 691
BLAST of mRNA_H-elongata_contig75122.15192.1 vs. uniprot
Match: A0A836CNG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG3_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.720e-46 Identity = 73/97 (75.26%), Postives = 87/97 (89.69%), Query Frame = 1
Query: 25 GHICDLLSFCVRSHTYRMKYFVLRNNVVSRVLRLLSCREKSLQLSAIRFLRSCVGIKDDFYNRYLVKNNLLAPVFGLFRENRGRDNLINSAIIELVE 315
H+CDLLS+CVRSHTYRMKYFVLRN++V+RVLRL CR+K LQL+A+RFLR+CVGIKDDFYNRY+VKNNLLAPVF L +N +DNLI SAI+EL+E
Sbjct: 97 AHLCDLLSYCVRSHTYRMKYFVLRNHIVARVLRLARCRDKFLQLAAVRFLRACVGIKDDFYNRYIVKNNLLAPVFALLAQNAAKDNLITSAIMELLE 193
BLAST of mRNA_H-elongata_contig75122.15192.1 vs. uniprot
Match: A0A7S3USX4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USX4_HETAK) HSP 1 Score: 150 bits (380), Expect = 8.430e-44 Identity = 70/101 (69.31%), Postives = 88/101 (87.13%), Query Frame = 1
Query: 13 KVSRGHICDLLSFCVRSHTYRMKYFVLRNNVVSRVLRLLSCREKSLQLSAIRFLRSCVGIKDDFYNRYLVKNNLLAPVFGLFRENRGRDNLINSAIIELVE 315
+++ GH DLL+FCVR HTYRMKYFVLRNN+V+RVLRLL R+K L+L+A+RF+R+CVGIKDDFYNRYLVKNNLLAPV +F++ + +D LINS IIE+VE
Sbjct: 12 RLALGHATDLLAFCVRQHTYRMKYFVLRNNIVARVLRLLRYRDKFLKLAAVRFIRACVGIKDDFYNRYLVKNNLLAPVLDMFKDQKQQDTLINSTIIEMVE 112
BLAST of mRNA_H-elongata_contig75122.15192.1 vs. uniprot
Match: A0A7S2RPQ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPQ1_9STRA) HSP 1 Score: 151 bits (381), Expect = 5.600e-42 Identity = 68/101 (67.33%), Postives = 89/101 (88.12%), Query Frame = 1
Query: 13 KVSRGHICDLLSFCVRSHTYRMKYFVLRNNVVSRVLRLLSCREKSLQLSAIRFLRSCVGIKDDFYNRYLVKNNLLAPVFGLFRENRGRDNLINSAIIELVE 315
K S GHICD+LS+CV+SHTYRMKYFVLRNN+V R+L LL R+K L+L+A+RF+R C+G KD+FYNRY+VK+NLLAPVF LF N+GRDNL++SAII++++
Sbjct: 94 KSSFGHICDILSYCVKSHTYRMKYFVLRNNLVGRILELLHQRDKFLKLAALRFVRQCIGAKDEFYNRYIVKHNLLAPVFTLFAANQGRDNLVSSAIIDMID 194
BLAST of mRNA_H-elongata_contig75122.15192.1 vs. uniprot
Match: A0A061R721_9CHLO (Protein phosphatase 4 regulatory subunit 3 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R721_9CHLO) HSP 1 Score: 134 bits (336), Expect = 5.190e-34 Identity = 62/97 (63.92%), Postives = 81/97 (83.51%), Query Frame = 1
Query: 25 GHICDLLSFCVRSHTYRMKYFVLRNNVVSRVLRLLSCREKSLQLSAIRFLRSCVGIKDDFYNRYLVKNNLLAPVFGLFRENRGRDNLINSAIIELVE 315
G I +LL FCV++H+YR+KY++LRNNVV +VLRLL C +K L ++A+RFLR+C+G+KD+FYNRYLV+NNLL PV F EN R NL+NSAI+ELVE
Sbjct: 501 GTIVELLCFCVQNHSYRIKYYILRNNVVEKVLRLLKCSQKWLVVAAVRFLRTCIGVKDEFYNRYLVRNNLLEPVVKAFIENGSRYNLLNSAILELVE 597
BLAST of mRNA_H-elongata_contig75122.15192.1 vs. uniprot
Match: A0A2R5GYY7_9STRA (Serine/threonine-protein phosphatase 4 regulatory subunit 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GYY7_9STRA) HSP 1 Score: 133 bits (335), Expect = 7.370e-34 Identity = 65/105 (61.90%), Postives = 84/105 (80.00%), Query Frame = 1
Query: 1 AETLKVSRGHICDLLSFCVRSHTYRMKYFVLRNNVVSRVLRLLSCREKSLQLSAIRFLRSCVGIKDDFYNRYLVKNNLLAPVFGLFRENRGRDNLINSAIIELVE 315
AET +V+ HI +LLSFCV++H +R+KYFVL ++V +VLRLL R+K L L AIRF R+CVG+KDDFYNR++VK NL AP+F +F N R+NLINSAIIEL+E
Sbjct: 715 AETARVAEHHITELLSFCVQTHGFRVKYFVLNQDIVDKVLRLLYSRDKHLVLGAIRFARTCVGLKDDFYNRHIVKLNLFAPIFEVFVSNGPRNNLINSAIIELLE 819
BLAST of mRNA_H-elongata_contig75122.15192.1 vs. uniprot
Match: A0A1Y1INW4_KLENI (Suppressor of Mek n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INW4_KLENI) HSP 1 Score: 133 bits (335), Expect = 7.400e-34 Identity = 65/105 (61.90%), Postives = 84/105 (80.00%), Query Frame = 1
Query: 1 AETLKVSRGHICDLLSFCVRSHTYRMKYFVLRNNVVSRVLRLLSCREKSLQLSAIRFLRSCVGIKDDFYNRYLVKNNLLAPVFGLFRENRGRDNLINSAIIELVE 315
AETL HIC+LL+FCV+ H++R+KY+VLRNNVV +VLRL REK L ++AIRFLR+C+G+KDDFY RYLVKNNL APV F+ N + N++NSA+IELV+
Sbjct: 541 AETL----NHICELLTFCVQHHSFRIKYYVLRNNVVEKVLRLTRRREKYLVVAAIRFLRTCIGLKDDFYARYLVKNNLFAPVMDAFKANGDKYNMLNSAVIELVD 641
BLAST of mRNA_H-elongata_contig75122.15192.1 vs. uniprot
Match: A0A7S0HVM9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HVM9_9EUKA) HSP 1 Score: 129 bits (323), Expect = 3.010e-32 Identity = 56/99 (56.57%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 19 SRGHICDLLSFCVRSHTYRMKYFVLRNNVVSRVLRLLSCREKSLQLSAIRFLRSCVGIKDDFYNRYLVKNNLLAPVFGLFRENRGRDNLINSAIIELVE 315
++ H+C+LLSFCV+ H+YR+KYF+LRNNV+++VLRL R+K L L+A+RF R+C+G+KD+FYNRY+VKN PV NR RDNL++S+I+EL E
Sbjct: 540 TQQHVCELLSFCVQKHSYRIKYFILRNNVLAKVLRLARSRDKCLVLAALRFFRTCIGLKDEFYNRYIVKNKCFEPVLAQLLRNRTRDNLVHSSILELFE 638
BLAST of mRNA_H-elongata_contig75122.15192.1 vs. uniprot
Match: R1FTL1_EMIHU (SMK-1 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FTL1_EMIHU) HSP 1 Score: 128 bits (321), Expect = 3.040e-32 Identity = 59/99 (59.60%), Postives = 76/99 (76.77%), Query Frame = 1
Query: 19 SRGHICDLLSFCVRSHTYRMKYFVLRNNVVSRVLRLLSCREKSLQLSAIRFLRSCVGIKDDFYNRYLVKNNLLAPVFGLFRENRGRDNLINSAIIELVE 315
+R H+C+LL F V HTYR+KYF+LRNNV+ RVLRL R+K L L+AIRF R+C+G+KD+FYNRY+VKN PV N GRDNL++SAI+EL+E
Sbjct: 399 ARQHVCELLCFFVTRHTYRIKYFILRNNVLCRVLRLAKVRDKGLVLAAIRFFRTCIGLKDEFYNRYIVKNRCFEPVVAQLLANLGRDNLVHSAILELLE 497 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75122.15192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig75122.15192.1 >prot_H-elongata_contig75122.15192.1 ID=prot_H-elongata_contig75122.15192.1|Name=mRNA_H-elongata_contig75122.15192.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp MWFRECYDYYPAGKSPFSSRQYASSAAVLASRTISITGTWLRTTSSRLFSback to top mRNA from alignment at H-elongata_contig75122:180..1795- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig75122.15192.1 ID=mRNA_H-elongata_contig75122.15192.1|Name=mRNA_H-elongata_contig75122.15192.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1616bp|location=Sequence derived from alignment at H-elongata_contig75122:180..1795- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig75122:180..1795- >mRNA_H-elongata_contig75122.15192.1 ID=mRNA_H-elongata_contig75122.15192.1|Name=mRNA_H-elongata_contig75122.15192.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=510bp|location=Sequence derived from alignment at H-elongata_contig75122:180..1795- (Himanthalia elongata Himel1 dioecious)back to top |