prot_H-elongata_contig75118.15191.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75118.15191.1
Unique Nameprot_H-elongata_contig75118.15191.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length415
Homology
BLAST of mRNA_H-elongata_contig75118.15191.1 vs. uniprot
Match: D8LGM2_ECTSI (20S proteasome alpha subunit G n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGM2_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 3.230e-64
Identity = 184/401 (45.89%), Postives = 216/401 (53.87%), Query Frame = 0
Query:   31 HIRGILPAGLPADGRALAQKAMEYCRSHRREYGEPMPGWVLADRLGEHIHATCVRWGSRAYPNELFVACWDGDGEEEDDDRVLACDTSRITNKKIAGRELVGARDELATARNGRDLGEEKQEGLRWVKKNGDRNGDDLTIAHG--------------------FNDEEEATVTAVSAAKDTGFQLYVVDPGGVARRYQAACSGRGSTRAREWLRRQSLLHASDA-ATSEDAGSKGERLRQQLARSGEPTREETDGGLLPGEGG--------GDDRGXXXXXXXXXXXXS-------------GMSIAGQKRCQPRRPLFSEMTCAEAARAMVEEARRFGDNSGKKPLGQEAGTGNSAGPGGD--VAGSAEVAWLSLASPRKESKEGNPCFVHYRSVEELFE 387
            HI GILPAGLPADGRALA KAMEYCRSHRREYGEP+PG +LA+RLGE IHA CVRWGSRAYPN LFVACW G+G         A DT    + +  G    G  D       G+ + + + +    V+K G   G    + H                       D+ E  V      +D GFQLYVVDPGG  RR++AAC+GRGS+RAR+WL R+    A+ A A  ++A S G      +  S    RE+  GG  P  GG        GDDR XXXXXXXXXXXX              G+   G++R QP    FS+MTCAEAARAMV EARR             AG    AG GG   VAG  EVAWLS+       K G P FVH+RS E LFE
Sbjct:  100 HI-GILPAGLPADGRALAHKAMEYCRSHRREYGEPIPGRLLAERLGEFIHAACVRWGSRAYPNALFVACW-GEG---------APDTP--ASLRSEGGHRSGGSDANIVVTGGKSVSKPETKETAVVEKGG---GGVEPVLHDDRQPVXXXXXXXXXXXXXXXXXDDGEGLVMD----RDAGFQLYVVDPGGAVRRHRAACTGRGSSRARKWLHRRVTGAAAPAPAPGKEAVSGG---ASGVGPSASAEREKN-GGWSPEAGGRDDAAEEDGDDRSXXXXXXXXXXXXXXXXXXXXXXXXXXGVRQRGRRRQQPP---FSQMTCAEAARAMVREARRV-----------RAGEPGKAGGGGSEAVAGLPEVAWLSI------DKGGEPVFVHHRSTERLFE 456          
BLAST of mRNA_H-elongata_contig75118.15191.1 vs. uniprot
Match: E1Z9U8_CHLVA (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z9U8_CHLVA)

HSP 1 Score: 63.2 bits (152), Expect = 1.190e-7
Identity = 26/73 (35.62%), Postives = 43/73 (58.90%), Query Frame = 0
Query:   34 GILPAGLPADGRALAQKAMEYCRSHRREYGEPMPGWVLADRLGEHIHATCVRWGSRAYPNELFVACWDGDGEE 106
            G+  AG+ ADGR++  +AM     ++  YG+P+PG VLA+RLG ++H   + W  R Y     +A +  +G +
Sbjct:   75 GVATAGVAADGRSIVSRAMSEANQYKSFYGDPIPGHVLAERLGSYVHVFNLYWYVRPYGVSTLLATYGKEGPQ 147          
BLAST of mRNA_H-elongata_contig75118.15191.1 vs. uniprot
Match: A0A8J2BHK6_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2BHK6_9DINO)

HSP 1 Score: 58.2 bits (139), Expect = 5.910e-6
Identity = 26/90 (28.89%), Postives = 52/90 (57.78%), Query Frame = 0
Query:   34 GILPAGLPADGRALAQKAMEYCRSHRREYGEPMPGWVLADRLGEHIHATCVRWGSRAYPNELFVACWDGDGEEEDDDRVLACDTSRITNK 123
            G +  GL  +GR++  +A +  +S+++ YGE +PG++LA+R+G ++H      G R   + + +  +D + +E     + +CDTS +  K
Sbjct:   75 GSVVCGLVPEGRSVVGRARQEAQSYKKNYGEVIPGYLLAERVGYYMHLHTRYSGLRPKGSTILIGSYDAETKEPS---LFSCDTSGLVQK 161          
BLAST of mRNA_H-elongata_contig75118.15191.1 vs. uniprot
Match: A0A0L0HNB8_SPIPD (Proteasome subunit alpha type n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HNB8_SPIPD)

HSP 1 Score: 55.1 bits (131), Expect = 6.360e-5
Identity = 30/74 (40.54%), Postives = 41/74 (55.41%), Query Frame = 0
Query:   31 HIRGILPAGLPADGRALAQKAMEYCRSHRREYGEPMPGWVLADRLGEHIHATCVRWGSRAYPNELFVACWDGDG 104
            HI GI  AG  AD R L  +A E  +S+R  Y  P+PG ++ADRLG+++ A  +    R +     VA  D DG
Sbjct:   73 HI-GIATAGFLADARHLVNRAREEAQSYRDIYRSPIPGKMIADRLGQYVQAYTLYSSVRPFGISTIVATVDKDG 145          
BLAST of mRNA_H-elongata_contig75118.15191.1 vs. uniprot
Match: PSA7_SCHPO (Probable proteasome subunit alpha type-7 n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) TaxID=284812 RepID=PSA7_SCHPO)

HSP 1 Score: 54.7 bits (130), Expect = 8.610e-5
Identity = 28/75 (37.33%), Postives = 40/75 (53.33%), Query Frame = 0
Query:   30 RHIRGILPAGLPADGRALAQKAMEYCRSHRREYGEPMPGWVLADRLGEHIHATCVRWGSRAYPNELFVACWDGDG 104
            RHI GI   G   DG+ + ++A +   S R  YG P+PG V+ADRLG ++         R +    FVA +D +G
Sbjct:   71 RHI-GIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDSEG 144          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75118.15191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LGM2_ECTSI3.230e-6445.8920S proteasome alpha subunit G n=2 Tax=Ectocarpus ... [more]
E1Z9U8_CHLVA1.190e-735.62PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A8J2BHK6_9DINO5.910e-628.89Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
A0A0L0HNB8_SPIPD6.360e-540.54Proteasome subunit alpha type n=2 Tax=Spizellomyce... [more]
PSA7_SCHPO8.610e-537.33Probable proteasome subunit alpha type-7 n=1 Tax=S... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 173..261
e-value: 3.3E-6
score: 28.5
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 29..127
e-value: 1.4E-9
score: 39.5
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 34..104
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 189..227
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 36..105
e-value: 5.5E-8
score: 32.5
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 34..105
IPR037555Proteasome subunit alpha 3PANTHERPTHR11599:SF10PROTEASOME SUBUNIT ALPHA TYPE-3coord: 34..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75118contigH-elongata_contig75118:600..2905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75118.15191.1mRNA_H-elongata_contig75118.15191.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75118 217..2983 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75118.15191.1 ID=prot_H-elongata_contig75118.15191.1|Name=mRNA_H-elongata_contig75118.15191.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=415bp
MGHQCVCARALEERCGGTWDYRPDRPHRRRHIRGILPAGLPADGRALAQK
AMEYCRSHRREYGEPMPGWVLADRLGEHIHATCVRWGSRAYPNELFVACW
DGDGEEEDDDRVLACDTSRITNKKIAGRELVGARDELATARNGRDLGEEK
QEGLRWVKKNGDRNGDDLTIAHGFNDEEEATVTAVSAAKDTGFQLYVVDP
GGVARRYQAACSGRGSTRAREWLRRQSLLHASDAATSEDAGSKGERLRQQ
LARSGEPTREETDGGLLPGEGGGDDRGGEGSRDSRGGDDSGMSIAGQKRC
QPRRPLFSEMTCAEAARAMVEEARRFGDNSGKKPLGQEAGTGNSAGPGGD
VAGSAEVAWLSLASPRKESKEGNPCFVHYRSVEELFEEAKSETRGLGEGG
NGETGGSDSRGKEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR037555Proteasome_alpha_3