mRNA_H-elongata_contig74807.15160.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74807.15160.1 vs. uniprot
Match: A0A261GRE7_9GAMM (GMP synthase n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GRE7_9GAMM) HSP 1 Score: 58.5 bits (140), Expect = 7.560e-9 Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 4 KASAWENEPWMVTLLDETRGLRESGRPVLGVCLGHQIMAKALGGLV 141
K S +++EPW+ LD R L SGRPV+G+C GHQ++AKALGG V
Sbjct: 73 KWSVYDDEPWIHRALDLARTLHHSGRPVVGICFGHQLLAKALGGEV 118
BLAST of mRNA_H-elongata_contig74807.15160.1 vs. uniprot
Match: A0A0P1IGC9_9RHOB (GMP synthase [glutamine-hydrolyzing] n=10 Tax=Ruegeria TaxID=97050 RepID=A0A0P1IGC9_9RHOB) HSP 1 Score: 57.4 bits (137), Expect = 1.670e-8 Identity = 25/43 (58.14%), Postives = 33/43 (76.74%), Query Frame = 1
Query: 13 AWENEPWMVTLLDETRGLRESGRPVLGVCLGHQIMAKALGGLV 141
A+E PW+ L D R +R+SGRP++GVC GHQI+A+ALGG V
Sbjct: 66 AYEGHPWIPPLEDLIRAIRQSGRPLIGVCFGHQIIAQALGGKV 108
BLAST of mRNA_H-elongata_contig74807.15160.1 vs. uniprot
Match: X7EH95_9RHOB (Glutamine amidotransferase n=1 Tax=Roseivivax halodurans JCM 10272 TaxID=1449350 RepID=X7EH95_9RHOB) HSP 1 Score: 57.4 bits (137), Expect = 1.680e-8 Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 4 KASAWENEPWMVTLLDETRGLRESGRPVLGVCLGHQIMAKALGGLV 141
K A+E+ PW+ L + R +R+SGRP++GVC GHQI+A+ALGG V
Sbjct: 63 KHGAYEDHPWIPPLEELVRDIRDSGRPLIGVCFGHQIIAQALGGRV 108
BLAST of mRNA_H-elongata_contig74807.15160.1 vs. uniprot
Match: UPI00166B37DC (type 1 glutamine amidotransferase n=1 Tax=Primorskyibacter flagellatus TaxID=1387277 RepID=UPI00166B37DC) HSP 1 Score: 57.0 bits (136), Expect = 2.300e-8 Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 4 KASAWENEPWMVTLLDETRGLRESGRPVLGVCLGHQIMAKALGGLV 141
K A+E+ PW+ L D R +R+SGRP++G+C GHQI+A+ALGG V
Sbjct: 63 KFGAYEDLPWIPPLEDLIRAIRDSGRPLVGICFGHQIIAQALGGKV 108
BLAST of mRNA_H-elongata_contig74807.15160.1 vs. uniprot
Match: UPI00147C9FCB (type 1 glutamine amidotransferase n=2 Tax=Ruegeria atlantica TaxID=81569 RepID=UPI00147C9FCB) HSP 1 Score: 57.0 bits (136), Expect = 2.320e-8 Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 1
Query: 13 AWENEPWMVTLLDETRGLRESGRPVLGVCLGHQIMAKALGGLVCARNG 156
A+E+ PW+ L D R +++SGRP++GVC GHQI+A+ALGG V NG
Sbjct: 66 AYEDHPWIPPLEDLIRTIQKSGRPLIGVCFGHQIIAQALGGKVEKFNG 113
BLAST of mRNA_H-elongata_contig74807.15160.1 vs. uniprot
Match: UPI001FB5383E (type 1 glutamine amidotransferase n=1 Tax=Shimia aestuarii TaxID=254406 RepID=UPI001FB5383E) HSP 1 Score: 57.0 bits (136), Expect = 2.340e-8 Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 4 KASAWENEPWMVTLLDETRGLRESGRPVLGVCLGHQIMAKALGGLV 141
K A+E+ PW+ L D R + ESGRP++GVC GHQI+A+ALGG V
Sbjct: 63 KHGAYEDHPWIPPLEDLIREIAESGRPLIGVCFGHQIIAQALGGKV 108
BLAST of mRNA_H-elongata_contig74807.15160.1 vs. uniprot
Match: UPI001E3E5FE0 (type 1 glutamine amidotransferase n=1 Tax=Seohaeicola saemankumensis TaxID=481181 RepID=UPI001E3E5FE0) HSP 1 Score: 56.6 bits (135), Expect = 3.250e-8 Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 4 KASAWENEPWMVTLLDETRGLRESGRPVLGVCLGHQIMAKALGGLV 141
K A+E+ PW+ L D R +R++G+P++GVC GHQI+A+ALGG V
Sbjct: 63 KHGAYEDHPWIPPLEDLIRAIRDAGKPLIGVCFGHQIIAQALGGKV 108
BLAST of mRNA_H-elongata_contig74807.15160.1 vs. uniprot
Match: A0A1H0JBU7_9RHOB (GMP synthase (Glutamine-hydrolysing) n=1 Tax=Lutimaribacter pacificus TaxID=391948 RepID=A0A1H0JBU7_9RHOB) HSP 1 Score: 56.2 bits (134), Expect = 4.680e-8 Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 4 KASAWENEPWMVTLLDETRGLRESGRPVLGVCLGHQIMAKALGGLV 141
K A+E+ PW+ L R +R+SGRP++GVC GHQI+A+ALGG V
Sbjct: 63 KHGAYEDHPWIPPLESLIRAIRDSGRPLVGVCFGHQIIAQALGGRV 108
BLAST of mRNA_H-elongata_contig74807.15160.1 vs. uniprot
Match: W8RNU1_9RHOB (GMP synthase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=W8RNU1_9RHOB) HSP 1 Score: 56.2 bits (134), Expect = 4.980e-8 Identity = 24/48 (50.00%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 13 AWENEPWMVTLLDETRGLRESGRPVLGVCLGHQIMAKALGGLVCARNG 156
A+E+ PW+ L D R + E+GRP++G+C GHQI+A+ALGG V +G
Sbjct: 66 AYEDHPWIAPLEDLIRAIHEAGRPLVGICFGHQIIAQALGGRVEKYSG 113
BLAST of mRNA_H-elongata_contig74807.15160.1 vs. uniprot
Match: UPI000525F758 (gamma-glutamyl-gamma-aminobutyrate hydrolase family protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI000525F758) HSP 1 Score: 56.2 bits (134), Expect = 5.330e-8 Identity = 26/52 (50.00%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 4 KASAWENEPWMVTLLDETRGLRESGRPVLGVCLGHQIMAKALGG-LVCARNG 156
K S +++E W+ LD R L ESG+PV+G+C GHQ++ KALGG +V ++NG
Sbjct: 73 KWSVYDDEAWIHRALDLARTLHESGQPVVGICFGHQLLTKALGGEVVKSKNG 124 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74807.15160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74807.15160.1 >prot_H-elongata_contig74807.15160.1 ID=prot_H-elongata_contig74807.15160.1|Name=mRNA_H-elongata_contig74807.15160.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp GKASAWENEPWMVTLLDETRGLRESGRPVLGVCLGHQIMAKALGGLVCARback to top mRNA from alignment at H-elongata_contig74807:1751..2098- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74807.15160.1 ID=mRNA_H-elongata_contig74807.15160.1|Name=mRNA_H-elongata_contig74807.15160.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=348bp|location=Sequence derived from alignment at H-elongata_contig74807:1751..2098- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74807:1751..2098- >mRNA_H-elongata_contig74807.15160.1 ID=mRNA_H-elongata_contig74807.15160.1|Name=mRNA_H-elongata_contig74807.15160.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=312bp|location=Sequence derived from alignment at H-elongata_contig74807:1751..2098- (Himanthalia elongata Himel1 dioecious)back to top |