mRNA_H-elongata_contig74130.15106.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 217 bits (552), Expect = 3.860e-63 Identity = 129/332 (38.86%), Postives = 188/332 (56.63%), Query Frame = 1
Query: 4 HLDVDMAYLKADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHAGLLW*KNVRDRARGEGFQIFQADPCVFRWILHGTVVGVIVVYVDDLLVASATKRDEEQSVRDLCSCFPIKDLGEASYYLGCHITRDRNVGTLKFNQHQYIQTVVGRLGVTKTSIVPSAAGGKTFSKSDSPQTDAEVKEMRQIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSP 999
H D+ A++++D++E++++ LPE + L K++YGL A W ++ GF AD CVFR I G VV +VV+VDD+ +R + Q RDL + P+K+LG+ +Y GC RD + GTLK +Q Y + + GV +P G K S+ D D EV P+RE++G+LMW AT TRPDI+ A +A++ +P HWRA L Y+ RT DLGIT+ R G + ++DADY + RRSVS G V+ GG IS FS QK +++E+EYV+LA+++ E+ FLRQV FM P++ P
Sbjct: 37 HFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCD-QFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQ---DEEVVSW---PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMP 360
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 228 bits (580), Expect = 5.530e-63 Identity = 130/333 (39.04%), Postives = 191/333 (57.36%), Query Frame = 1
Query: 4 HLDVDMAYLKADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHAGLLW*KNVRDRARGEGFQIFQADPCVFRWILHGTVVGVIVVYVDDLLVASATKRDEEQSVRDLCSCFPIKDLGEASYYLGCHITRDRNVGTLKFNQHQYIQTVVGRLGVTKTSIVPSAAGGKTFSKSDSPQTDAEVKEMRQIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSPS 1002
H DV AY A ++EE++++LP D ++ +A+YGL +G W + D GF+ +ADPCVFR ++ VV +IV+YVDD+LVA + + D E+ + L FP K+LGE ++ GC I RD GTL+ +Q YI ++V R V TS +P+ G K + +E + P RE +G++MW +T +RPD+SFA +A+ P +HW A QK L YL TRDLGITY R G G L+ ++DA Y D RRSVS A + G +S S Q + + +S+E+EY+A E V E F+R V +F+ P+++ S
Sbjct: 847 HWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR--GSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSS 1168
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 228 bits (580), Expect = 6.570e-63 Identity = 130/333 (39.04%), Postives = 191/333 (57.36%), Query Frame = 1
Query: 4 HLDVDMAYLKADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHAGLLW*KNVRDRARGEGFQIFQADPCVFRWILHGTVVGVIVVYVDDLLVASATKRDEEQSVRDLCSCFPIKDLGEASYYLGCHITRDRNVGTLKFNQHQYIQTVVGRLGVTKTSIVPSAAGGKTFSKSDSPQTDAEVKEMRQIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSPS 1002
H DV AY A ++EE++++LP D ++ +A+YGL +G W + D GF+ +ADPCVFR ++ VV +IV+YVDD+LVA + + D E+ + L FP K+LGE ++ GC I RD GTL+ +Q YI ++V R V TS +P+ G K + +E + P RE +G++MW +T +RPD+SFA +A+ P +HW A QK L YL TRDLGITY R G G L+ ++DA Y D RRSVS A + G +S S Q + + +S+E+EY+A E V E F+R V +F+ P+++ S
Sbjct: 1226 HWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR--GSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSS 1547
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 228 bits (580), Expect = 6.630e-63 Identity = 130/333 (39.04%), Postives = 191/333 (57.36%), Query Frame = 1
Query: 4 HLDVDMAYLKADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHAGLLW*KNVRDRARGEGFQIFQADPCVFRWILHGTVVGVIVVYVDDLLVASATKRDEEQSVRDLCSCFPIKDLGEASYYLGCHITRDRNVGTLKFNQHQYIQTVVGRLGVTKTSIVPSAAGGKTFSKSDSPQTDAEVKEMRQIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSPS 1002
H DV AY A ++EE++++LP D ++ +A+YGL +G W + D GF+ +ADPCVFR ++ VV +IV+YVDD+LVA + + D E+ + L FP K+LGE ++ GC I RD GTL+ +Q YI ++V R V TS +P+ G K + +E + P RE +G++MW +T +RPD+SFA +A+ P +HW A QK L YL TRDLGITY R G G L+ ++DA Y D RRSVS A + G +S S Q + + +S+E+EY+A E V E F+R V +F+ P+++ S
Sbjct: 1246 HWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR--GSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSS 1567
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 228 bits (580), Expect = 6.700e-63 Identity = 130/333 (39.04%), Postives = 191/333 (57.36%), Query Frame = 1
Query: 4 HLDVDMAYLKADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHAGLLW*KNVRDRARGEGFQIFQADPCVFRWILHGTVVGVIVVYVDDLLVASATKRDEEQSVRDLCSCFPIKDLGEASYYLGCHITRDRNVGTLKFNQHQYIQTVVGRLGVTKTSIVPSAAGGKTFSKSDSPQTDAEVKEMRQIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSPS 1002
H DV AY A ++EE++++LP D ++ +A+YGL +G W + D GF+ +ADPCVFR ++ VV +IV+YVDD+LVA + + D E+ + L FP K+LGE ++ GC I RD GTL+ +Q YI ++V R V TS +P+ G K + +E + P RE +G++MW +T +RPD+SFA +A+ P +HW A QK L YL TRDLGITY R G G L+ ++DA Y D RRSVS A + G +S S Q + + +S+E+EY+A E V E F+R V +F+ P+++ S
Sbjct: 1389 HWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR--GSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSS 1710
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE) HSP 1 Score: 223 bits (569), Expect = 1.800e-62 Identity = 129/333 (38.74%), Postives = 190/333 (57.06%), Query Frame = 1
Query: 4 HLDVDMAYLKADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHAGLLW*KNVRDRARGEGFQIFQADPCVFRWILHGTVVGVIVVYVDDLLVASATKRDEEQSVRDLCSCFPIKDLGEASYYLGCHITRDRNVGTLKFNQHQYIQTVVGRLGVTKTSIVPSAAGGKTFSKSDSPQTDAEVKEMRQIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSPS 1002
H DV AY A ++EE++++LP D ++ +A+YGL +G W + D GF+ +ADPCVFR ++ VV +IV+YVDD+LVA + + D E+ + L FP K+LGE ++ GC I RD + GTL+ +Q YI ++V R V TS +P+ G K + + + P RE VG++MW +T +RPD+SFA +A+ P +HW A QK L YL TRDLGITY R G G L+ ++DA Y D RRSVS A + G +S S + + + +S+E+EY+A E V E F+R V +F+ P++ S
Sbjct: 438 HWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGG-------EWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR--GSGLGLAVYVDARYADTED-RRSVSRLATTVGGTVVSHGSKARSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETRGSS 759
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 213 bits (543), Expect = 1.490e-61 Identity = 124/332 (37.35%), Postives = 182/332 (54.82%), Query Frame = 1
Query: 4 HLDVDMAYLKADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHAGLLW*KNVRDRARGEGFQIFQADPCVFRWILHGTVVGVIVVYVDDLLVASATKRDEEQSVRDLCSCFPIKDLGEASYYLGCHITRDRNVGTLKFNQHQYIQTVVGRLGVTKTSIVPSAAGGKTFSKSDSPQTDAEVKEMRQIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSP 999
H DV+ A++++++EE++Y+ LP+ + L K++YGL A W ++ GF+ AD CVFR I G VV ++VV+VDD+ +R ++ DL P+K+LGE +Y GC R++ G L +Q + + GV VP ++G K S D+ + E P+RE+VG+LMW AT TRPDI+ A +A++ +P HW AA L Y RT GI++ R EG L + DAD+ + RRSVS G V GGA+S FS QK +++E+EYVAL ++V E+ FLRQ+ FM PQ P
Sbjct: 61 HFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGA-DLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-LSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMP 384
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 217 bits (552), Expect = 1.740e-61 Identity = 129/332 (38.86%), Postives = 188/332 (56.63%), Query Frame = 1
Query: 4 HLDVDMAYLKADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHAGLLW*KNVRDRARGEGFQIFQADPCVFRWILHGTVVGVIVVYVDDLLVASATKRDEEQSVRDLCSCFPIKDLGEASYYLGCHITRDRNVGTLKFNQHQYIQTVVGRLGVTKTSIVPSAAGGKTFSKSDSPQTDAEVKEMRQIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSP 999
H D+ A++++D++E++++ LPE + L K++YGL A W ++ GF AD CVFR I G VV +VV+VDD+ +R + Q RDL + P+K+LG+ +Y GC RD + GTLK +Q Y + + GV +P G K S+ D D EV P+RE++G+LMW AT TRPDI+ A +A++ +P HWRA L Y+ RT DLGIT+ R G + ++DADY + RRSVS G V+ GG IS FS QK +++E+EYV+LA+++ E+ FLRQV FM P++ P
Sbjct: 211 HFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCD-QFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQ---DEEVVSW---PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMP 534
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 216 bits (549), Expect = 6.760e-60 Identity = 128/340 (37.65%), Postives = 189/340 (55.59%), Query Frame = 1
Query: 4 HLDVDMAYLKADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHAGLLW*KNVRDRARGEGFQIFQADPCVFRWILHGTVVGVIVVYVDDLLVASATKRDEEQSVRDLCSCFPIKDLGEASYYLGCHITRDRNVGTLKFNQHQYIQTVVGRLGVTKTSIVPSAAGGKTFSKSDSPQTDAEVKEMRQIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASS-------ESEYVALAEMVNELRFLRQVKAFMTPQSTSPS 1002
H DV AY A ++EE++++LP D ++ +A+YGL +G W + D GF+ +ADPCVFR ++ VV +IV+YVDD+LVA + + D E+ + L FP K+L E ++ GC I RD GTL+ +Q YI ++V R V TS +P++ G K D ++ + P RE +G++MW +T +RPD+SFA +A+ P +HW A QK L YL TRDLGITY R G G L+ ++DA Y D RRSVS A + G +S S Q + + +S+ E+EY E V E F+R V +F+ P+++ S
Sbjct: 401 HWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDD-------EKGGEWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR--GSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTXXXXXXTEAEYFTAGECVKEALFVRAVLSFVAPETSGSS 729
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6A3J8V8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J8V8_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.670e-59 Identity = 120/320 (37.50%), Postives = 186/320 (58.13%), Query Frame = 1
Query: 7 LDVDMAYLKADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHAGLLW*KNVRDRARGEGFQIFQADPCVFRWILHGTVVGVIVVYVDDLLVASATKRDEEQSVRDLCSCFPIKDLGEASYYLGCHITRDRNVGTLKFNQHQYIQTVVGRLGVTKT-SIVPSAAGGKTFSKSDSPQTDAEVKEMRQIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSF-SLVQKVTAAASSESEYVALAEMVNELRFLR 960
LD D A+ +D++E++++E+P ++ + L KA+YGL A W + + GF+ AD CV+ + V V +YVDD+++A+ T + + L S F +K+LGEA + LG I DR GTL Q +Y+ VV R ++V G SK+ SP TDAE ++MR PY+ ++G+L++ T TRPD+++ QL++F +NPG +HW+AA + L+YL T+D GI Y G+ L + DAD+G+ LD RRSVS G ++M GGA F S Q+ A +S+E+EY+AL+ E+ + R
Sbjct: 21 LDADTAFPNSDLKEQVFMEVPYGITNAANMMCKLDKAIYGLKQAASAWHQTIHAVFVKIGFRSCGADKCVYVKVSKDNYVYVC-LYVDDMIIAAKTSEEINEVKMALKSAFKMKELGEAKFILGMEIDHDRTTGTLMVKQTRYVDDVVNRFNQQDAKAVVNPCETGMKLSKTQSPATDAEREDMRGKPYKSLIGSLLYITTCTRPDVAYIVTQLSQFLENPGQQHWKAAIRVLRYLKTTKDFGIVYSGNNGKA-VLEVYTDADWGSNLDGRRSVS-GIMMMIGGAPGVFKSKYQRTVALSSAEAEYMALSLCTQEVLWTR 337 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74130.15106.1 >prot_H-elongata_contig74130.15106.1 ID=prot_H-elongata_contig74130.15106.1|Name=mRNA_H-elongata_contig74130.15106.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp MRQIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALback to top mRNA from alignment at H-elongata_contig74130:1958..3058- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74130.15106.1 ID=mRNA_H-elongata_contig74130.15106.1|Name=mRNA_H-elongata_contig74130.15106.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1101bp|location=Sequence derived from alignment at H-elongata_contig74130:1958..3058- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74130:1958..3058- >mRNA_H-elongata_contig74130.15106.1 ID=mRNA_H-elongata_contig74130.15106.1|Name=mRNA_H-elongata_contig74130.15106.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at H-elongata_contig74130:1958..3058- (Himanthalia elongata Himel1 dioecious)back to top |