mRNA_H-elongata_contig74093.15104.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74093.15104.1 vs. uniprot
Match: A0A6H5KPD3_9PHAE (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPD3_9PHAE) HSP 1 Score: 363 bits (931), Expect = 1.310e-120 Identity = 181/228 (79.39%), Postives = 198/228 (86.84%), Query Frame = 1
Query: 1 GMLPVAYGMAAFGGTGLVVAPALLAVFGVVSAYTMVSLGRASERTKRWSFRSLWAELVGKDTAWVIEVTMALMTFGCCIFYSAFAGDLFSALAKT-SFLPAVLKRRAVDLSLLSLFPLLPLCLMKNLNALQYTSFFGVISILYTVSFVIKRSLDGTYSEGGRFFEAIDVKYRSPVPMPWDTVKLWRVGPGLATLMNMSCVAFMCHYNGVKYYEELKHRTVKKYVVTIG 681
GMLPVAYGMAA GGTGL VAPALLA FG++SAYTM+S+GRA +RTKRWSF LW +LVGK +AWV+E+ MALMTFGCCIFY AFAGDLFSALA T S LP VLK+RAVDL +L L PLLPLCLMKNL+ALQYTSF GV+SILYTV FV+KRSLDGTYSEGG FF ID ++RSPVP PW VKLWRVGPGL TLMNMSCVAFMCHYNGVKYYEEL+ RT KKY VTIG
Sbjct: 148 GMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKRSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLVILGLCPLLPLCLMKNLSALQYTSFVGVVSILYTVIFVVKRSLDGTYSEGGEFFNTIDARFRSPVPSPWGVVKLWRVGPGLVTLMNMSCVAFMCHYNGVKYYEELEDRTEKKYAVTIG 375
BLAST of mRNA_H-elongata_contig74093.15104.1 vs. uniprot
Match: A0A835YIC2_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIC2_9STRA) HSP 1 Score: 299 bits (766), Expect = 2.300e-97 Identity = 148/228 (64.91%), Postives = 182/228 (79.82%), Query Frame = 1
Query: 1 GMLPVAYGMAAFGGTGLVVAPALLAVFGVVSAYTMVSLGRASERTKRWSFRSLWAELVGKDTAWVIEVTMALMTFGCCIFYSAFAGDLFSALAKTS-FLPAVLKRRAVDLSLLSLFPLLPLCLMKNLNALQYTSFFGVISILYTVSFVIKRSLDGTYSEGGRFFEAIDVKYRSPVPMPWDTVKLWRVGPGLATLMNMSCVAFMCHYNGVKYYEELKHRTVKKYVVTIG 681
GMLPVA+G+AA GGTGL+ A +++AVFG++SAYT+VSLGRA++ T ++F LW L+ +AWVIEV A+MTFGCCIFYSAF GDLFS+LA+ S +PA LK R L L +FPLLPLCL+KNL+ALQYTS G+ S+LY+V V+KRSLDGTY+ GG F+E ID+KYRSP PW +V LWRVGPG TLMNM+CVAFM HYNGVKYYEEL+HRTV++Y IG
Sbjct: 18 GMLPVAFGIAAGGGTGLLTATSIIAVFGLISAYTLVSLGRAAQLTGEYTFSGLWGTLISPGSAWVIEVAFAVMTFGCCIFYSAFIGDLFSSLAQASDIVPAFLKPRWAVLCALGVFPLLPLCLLKNLSALQYTSMGGLASVLYSVGMVVKRSLDGTYAAGGEFYEGIDLKYRSPQADPWASVGLWRVGPGTVTLMNMACVAFMAHYNGVKYYEELEHRTVRRYTKAIG 245
BLAST of mRNA_H-elongata_contig74093.15104.1 vs. uniprot
Match: A0A4D9DBF3_9STRA (Aa_trans domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBF3_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.150e-72 Identity = 121/227 (53.30%), Postives = 156/227 (68.72%), Query Frame = 1
Query: 1 GMLPVAYGMAAFGGTGLVVAPALLAVFGVVSAYTMVSLGRASERTKRWSFRSLWAELVGKDTAWVIEVTMALMTFGCCIFYSAFAGDLFSALAKTSFLPAVLKRRAVDLSLLSLFPLLPLCLMKNLNALQYTSFFGVISILYTVSFVIKRSLDGTYSEGGRFFEAIDVKYRSPVPMPWDTVKLWRVGPGLATLMNMSCVAFMCHYNGVKYYEELKHRTVKKYVVTIG 681
GMLP+A+GMA+ GGTGLV A +LL +FG +SAYT++S+ RA E T +SFR +W+ + TAW+I+ + + FGCCIFYSAF GDL +ALA+ PAVL +R + L L +FPL PLCLMKNL+ALQY+S GV ILYT +FV+KR DG+Y G F ID YR P KL+R+GPG +LMNM+CVAF HYNG+ YY ELK R + +Y +G
Sbjct: 65 GMLPLAFGMASEGGTGLVPALSLLVLFGSLSAYTLISIARACEATGEYSFRGIWSRTLHPSTAWIIDAGITFLCFGCCIFYSAFIGDLSAALAQALGAPAVLHKRWLCLVALHIFPLWPLCLMKNLSALQYSSIVGVFGILYTTAFVVKRQCDGSYGPSGHFHALIDAVYRPQTPSYSAFEKLFRLGPGAISLMNMACVAFTTHYNGIAYYTELKDRNLSRYSGAVG 291
BLAST of mRNA_H-elongata_contig74093.15104.1 vs. uniprot
Match: W7TM90_9STRA (Pentatricopeptide repeat containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM90_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.790e-68 Identity = 121/227 (53.30%), Postives = 156/227 (68.72%), Query Frame = 1
Query: 1 GMLPVAYGMAAFGGTGLVVAPALLAVFGVVSAYTMVSLGRASERTKRWSFRSLWAELVGKDTAWVIEVTMALMTFGCCIFYSAFAGDLFSALAKTSFLPAVLKRRAVDLSLLSLFPLLPLCLMKNLNALQYTSFFGVISILYTVSFVIKRSLDGTYSEGGRFFEAIDVKYRSPVPMPWDTVKLWRVGPGLATLMNMSCVAFMCHYNGVKYYEELKHRTVKKYVVTIG 681
GMLP+A+GMA+ GGTGLV A +LL +FG +SAYT++S+ RA E T +SFR +W+ + TAW+I+ + + FGCCIFYSAF GDL +ALA+ PAVL +R + L L +FPL PLCLMKNL+ALQY+S GV ILYT +FV+KR DG+Y G F ID YR P KL+R+GPG +LMNM+CVAF HYNG+ YY ELK R + +Y +G
Sbjct: 1164 GMLPLAFGMASEGGTGLVPALSLLVLFGSLSAYTLISIARACEATGEYSFRGIWSRTLHPSTAWIIDAGITFLCFGCCIFYSAFIGDLSAALAQALGAPAVLHKRWLCLVALHIFPLWPLCLMKNLSALQYSSIVGVFGILYTTAFVVKRQCDGSYGPSGHFHALIDAVYRPQTPSYSAFEKLFRLGPGAISLMNMACVAFTTHYNGIAYYTELKDRNLSRYSGAVG 1390
BLAST of mRNA_H-elongata_contig74093.15104.1 vs. uniprot
Match: A0A7S3XLX7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLX7_HETAK) HSP 1 Score: 222 bits (565), Expect = 6.430e-66 Identity = 120/229 (52.40%), Postives = 156/229 (68.12%), Query Frame = 1
Query: 1 GMLPVAYGMAAFGGTGLVVAPALLAVFGVVSAYTMVSLGRASERTKRWSFRSLWAELVGKDTAWVIEVTMALMTFGCCIFYSAFAGDLFSALAKTSFLPAVLKRRAVDLSLLSLFPLLPLCLMKNLNALQYTSFFGVISILYTVSFVIKRSLDGTYSEGGRFFEAIDVKYRSPVPMPWDTVKLWRVGPGLATLMNMSCVAFMCHYNGVKYYEELKHRTVKKY--VVTIG 681
GMLP+A+G+AA GGTGL A LLA F +SAYT+VSLGRA++ T++ + +WAE VG + WV + MAL+ +GCC+FYSAF GD+F ALA + LPA L++R + L LSLFP+LPLCL+++L+AL T+ GV++I YTV FVI RSLDG+Y GG F A+ R + GPG TL+ M+CVAF+CHYNGV YY EL RTV+ Y V T G
Sbjct: 166 GMLPLAFGIAAGGGTGLGTAAGLLAGFAALSAYTLVSLGRAAQATQQATLSGVWAETVGPQSTWVPDGAMALLCYGCCVFYSAFVGDIFGALASAAGLPAALRQRWLVLLALSLFPILPLCLLRDLSALSATNVGGVLAIAYTVGFVIYRSLDGSYQPGGAFHLAMKAALRPDHGAGQPA--FFEAGPGTLTLLTMACVAFLCHYNGVGYYVELNRRTVRNYAKVATTG 392
BLAST of mRNA_H-elongata_contig74093.15104.1 vs. uniprot
Match: A0A7S1UC63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC63_9STRA) HSP 1 Score: 209 bits (532), Expect = 2.030e-62 Identity = 119/233 (51.07%), Postives = 152/233 (65.24%), Query Frame = 1
Query: 1 GMLPVAYGMAAFGGTGLVVAPALLAVFGVVSAYTMVSLGRASERTKRWSFRSLWAELVGKDTAWVIEVTMALMTFGCCIFYSAFAGDLFSALAKTSFLPAVLKRRAVDLSLLSLFPLLPLCLMKNLNALQYTSFFGVISILYTVSFVIKRSLDGTYSEGGRFFEAIDVKY------RSPVPMPWDTVKLWRVGPGLATLMNMSCVAFMCHYNGVKYYEELKHRTVKKYVVTIG 681
GML +A+GMAA GGTG V A ALLA FG VS YTM SL RASE T++ S +W +LVG+ +A +E + L+ +GCC+FY+AF GDLF +L+ LP +R L LS PLLPLCL+KNL+ L Y+S G + ILYT FV KRS DG+Y EG FFEA+D KY ++ + R+G G TL NM+CVAFM HYNG+KYYEEL+ RT ++Y +G
Sbjct: 21 GMLMLAFGMAAHGGTGAVPAVALLAGFGAVSVYTMWSLARASEETQQASLMGVWTDLVGERSAVYVEGIVTLLCYGCCVFYAAFIGDLFHSLSMRVGLPF---KRFQVLGGLSAVPLLPLCLLKNLSVLGYSSVVGFLGILYTAFFVAKRSGDGSYMEGAPFFEALDDKYLPGFGSKAARAAGGAALDPLRIGAGTVTLANMACVAFMAHYNGIKYYEELEDRTPRRYAGVMG 250
BLAST of mRNA_H-elongata_contig74093.15104.1 vs. uniprot
Match: A0A7S2V5G6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5G6_9STRA) HSP 1 Score: 197 bits (502), Expect = 1.030e-56 Identity = 101/214 (47.20%), Postives = 141/214 (65.89%), Query Frame = 1
Query: 1 GMLPVAYGMAAFGGTGLVVAPALLAVFGVVSAYTMVSLGRASERTKRWSFRSLWAELVGKDTAWVIEVTMALMTFGCCIFYSAFAGDLFSALAKTSFLPAVLKRRAVDLSLLSLFPLLPLCLMKNLNALQYTSFFGVISILYTVSFVIKRSLDGTYSEGGRFFEAIDVKYRSPVPMPWDTVKLWRVGPGLATLMNMSCVAFMCHYNGVKYYEEL 642
G++P++YG+AA GGTGL ++ LL VFG +S YTM+ +GRA E T S R +W VGK T WV++ ++L+ FGCC+F+SAF GDLF+ALA P+ L+ R + L L SL +LPLCLM++L+ L+YTSF GV ++LYT+ FV+ R G Y++GGR F+++ + P V LWR GPG +N+ CV FM HYN Y+ L
Sbjct: 123 GIMPLSYGIAAGGGTGLALSTVLLVVFGTISTYTMLCIGRACEMTGEKSLRGVWEVAVGKSTGWVVDACVSLLCFGCCVFFSAFIGDLFAALAAALQFPSQLQVRWLVLGLTSLAVILPLCLMEDLSTLKYTSFGGVGALLYTLVFVLVRQRGGAYAQGGRLFDSMPPHLQ---PALSKAVPLWRFGPGTLLFLNLVCVGFMAHYNAANYHASL 333
BLAST of mRNA_H-elongata_contig74093.15104.1 vs. uniprot
Match: B7FRQ8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRQ8_PHATC) HSP 1 Score: 184 bits (468), Expect = 7.230e-52 Identity = 111/243 (45.68%), Postives = 149/243 (61.32%), Query Frame = 1
Query: 1 GMLPVAYGMAAFGGTGLVVAPALLAVFGVVSAYTMVSLGRAS---------ERTKRWSFRSLWAELV--GKDTAWVIEVTMALMTFGCCIFYSAFAGDLFSALAK-TSFLPAVLKRRAVDLSLLSLFPLLPLCLMKNLNALQYTSFFGVISILYTVSFVIKRSLDGTYSEGGRFFEAIDVKYRSPVPMP------------WDTVKLWRVGPGLATLMNMSCVAFMCHYNGVKYYEELKHRTV 657
GMLP+AYGMAA GGTG V+A A+L VFG +S Y++VS RA+ E S ++W V GK T ++ +V +T GC +FYSAF GD+F +L LP+VL++R L LL P+LPLCL K+L+AL+Y+S G++ I YTV FV KR +DG+Y+EGG++F+ + K++ P P+ + G GL TLMNM CVA+ CHYN VKYY ELK RTV
Sbjct: 97 GMLPIAYGMAAAGGTGPVLATAVLVVFGALSWYSLVSFARAADVVLVQSKEEHAAGESLSAVWERTVPNGKLTTYIPDVGCVFLTVGCLLFYSAFIGDIFGSLVSGVKGLPSVLQKRWPVLLLLHAVPILPLCLKKDLSALKYSSMTGLLGIFYTVFFVGKRLVDGSYAEGGKYFDLMATKFQ-PAPLANFPHTQSGVLGYLADIPSMYAGKGLFTLMNMCCVAYACHYNAVKYYMELKDRTV 338
BLAST of mRNA_H-elongata_contig74093.15104.1 vs. uniprot
Match: A0A1Z5K500_FISSO (Aa_trans domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K500_FISSO) HSP 1 Score: 173 bits (439), Expect = 7.050e-48 Identity = 101/233 (43.35%), Postives = 144/233 (61.80%), Query Frame = 1
Query: 1 GMLPVAYGMAAFGGTGLVVAPALLAVFGVVSAYTMVSLGRASERT--------KRWSFRSLWAELVGKDTAWVIEVTMALMTFGCCIFYSAFAGDLFSALAK-TSFLPAVLKRRAVDLSLLSLFPLLPLCLMKNLNALQYTSFFGVISILYTVSFVIKRSLDGTYSEGGRFFEAIDVKYR-----SPVPMPWDTVKLWRVGPGLATLMNMSCVAFMCHYNGVKYYEELKHRTV 657
GMLP+AYGMAA GGTG V+A +L VFG +S Y++V+ RA++ T S +W VG T ++ ++ +T GC +FYSAF GD+F +L LP +L++R L LL P+LPLCL ++L++LQY+S G++ I+YTV FV KR +DG+Y+ GG+F+ + + V +KL++ GL LMNM CVA+ CHYN VKY+ ELK+RTV
Sbjct: 78 GMLPIAYGMAAGGGTGPVLATLILLVFGFLSWYSLVTWARAADATLCREKPVVMAESLSEVWERTVGPQTKFIPDLGCVALTLGCLLFYSAFLGDIFGSLVSGLPSLPPILRKRWTVLLLLHAVPVLPLCLAEDLSSLQYSSMTGLLGIIYTVFFVGKRLVDGSYAAGGKFYNLMPNHLHPSGQGTGVLGLVSELKLFQAKRGLLVLMNMCCVAYACHYNSVKYFMELKNRTV 310
BLAST of mRNA_H-elongata_contig74093.15104.1 vs. uniprot
Match: A0A4D9D223_9STRA (Aa_trans domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D223_9STRA) HSP 1 Score: 161 bits (407), Expect = 6.230e-44 Identity = 90/222 (40.54%), Postives = 136/222 (61.26%), Query Frame = 1
Query: 1 GMLPVAYGMAAFGGTGLVVAPALLAVFGVVSAYTMVSLGRASERTKRWSFRSLWAELVGKDTAWVIEVTMALMTFGCCIFYSAFAGDLFSALAKTSFLPAVLKRRAVDLSLLSLFPLLPLCLMKNLNALQYTSFFGVISILYTVSFVIKRSLDGTYSEGGRFFEAIDVKYRSPVPMPWDTVKLWRVGPGLATLMNMSCVAFMCHYNGVKYYEELKHRTVKKY 666
GML + G+AA GTG + A LLA V SAYT V +GR+ E T+ SF+ W+ VG AWV++ + + F CI Y+ F GD F++L K + LPA L R + +++ L PL L+K+L+ALQY+S+ G+ +++YTV F+ R DG+Y++GG FF AI + R P P + W++ G A L +M ++M H N VK+Y EL+ R+V+++
Sbjct: 12 GMLALPAGLAAGAGTGYIPAYLLLAFSAVSSAYTFVLVGRSVEATRSRSFKEAWSRTVGPAQAWVVDYAITALAFAVCIVYACFVGDTFTSLLKGAGLPAWLSSREASILAVTITVLFPLTLLKDLSALQYSSYVGIAAVIYTVLFMAWRFWDGSYAKGGAFFAAIAPELR-PRPAHFGP---WKMSVGTAILFSMFSTSYMAHTNAVKFYNELEGRSVRRF 229 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74093.15104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74093.15104.1 >prot_H-elongata_contig74093.15104.1 ID=prot_H-elongata_contig74093.15104.1|Name=mRNA_H-elongata_contig74093.15104.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=227bp MLPVAYGMAAFGGTGLVVAPALLAVFGVVSAYTMVSLGRASERTKRWSFRback to top mRNA from alignment at H-elongata_contig74093:96..2832- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74093.15104.1 ID=mRNA_H-elongata_contig74093.15104.1|Name=mRNA_H-elongata_contig74093.15104.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2737bp|location=Sequence derived from alignment at H-elongata_contig74093:96..2832- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74093:96..2832- >mRNA_H-elongata_contig74093.15104.1 ID=mRNA_H-elongata_contig74093.15104.1|Name=mRNA_H-elongata_contig74093.15104.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1362bp|location=Sequence derived from alignment at H-elongata_contig74093:96..2832- (Himanthalia elongata Himel1 dioecious)back to top |