mRNA_H-elongata_contig72657.14936.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig72657.14936.1
Unique NamemRNA_H-elongata_contig72657.14936.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig72657.14936.1 vs. uniprot
Match: W7U2W4_9STRA (DNA topoisomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2W4_9STRA)

HSP 1 Score: 213 bits (542), Expect = 2.370e-65
Identity = 106/175 (60.57%), Postives = 132/175 (75.43%), Query Frame = 1
Query:    1 KDKKDLERQLVEEARGCQWLVLWLDCDREGENIAFEVIEVCLRRNRNMRILRARFSALIPREILNSVQRLTPPNEHQAKAVEARQEIDLRLGSAFTRFQTMRLQSRFDDLQDGVISYGPCQFPTLGFVVDRYKRIQAFQPEAFWSIKMEYA---EDDPSSPGGKARADFSWQRVR 516
            KDK+ LER L  EAR CQ L+LWLDCD EGENIAFEV++VC   N  +R+ RARFSALIPREI ++++ L  PN +Q++AV AR EIDLR+G+AFTRFQT++LQ +FD ++D +ISYGPCQFPT+GFVVDRYK I++FQ E FW I+M Y    ED    P G  R  F W+R R
Sbjct:   97 KDKESLERCLKSEARVCQRLILWLDCDLEGENIAFEVMDVCRAANSRLRVERARFSALIPREIWHALEHLVEPNVYQSEAVNARMEIDLRIGAAFTRFQTLKLQGKFDGVEDSIISYGPCQFPTMGFVVDRYKAIESFQREEFWRIQMAYRGGREDGDGGPQGITR--FQWKRER 269          
BLAST of mRNA_H-elongata_contig72657.14936.1 vs. uniprot
Match: A0A453IUH3_AEGTS (DNA topoisomerase n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453IUH3_AEGTS)

HSP 1 Score: 197 bits (500), Expect = 2.090e-60
Identity = 99/172 (57.56%), Postives = 126/172 (73.26%), Query Frame = 1
Query:    4 DKKDLERQLVEEARGCQWLVLWLDCDREGENIAFEVIEVCLRRNRNMRILRARFSALIPREILNSVQRLTPPNEHQAKAVEARQEIDLRLGSAFTRFQTMRLQSRF-----DDLQDGVISYGPCQFPTLGFVVDRYKRIQAFQPEAFWSIKMEYAEDDPSSPGGKARADFSW 504
            DK+D++R L EEAR CQWLVLWLDCDREGENIA+EV+++C   NRN+ I RARFSALIPREI  +VQ L  PN+  A AV+ARQEIDLR+G++FTRFQTM L+  F      + ++ V+SYGPCQFPTLGF+V+R+  IQA +PE FW+I   +  D+ +       A F W
Sbjct:   89 DKQDIKRTLEEEARTCQWLVLWLDCDREGENIAYEVVDICAGANRNLNIWRARFSALIPREIHEAVQHLARPNKLFADAVDARQEIDLRIGASFTRFQTMLLKDAFVLDVSGEERNMVLSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCSHTSDEGT-------ASFIW 253          
BLAST of mRNA_H-elongata_contig72657.14936.1 vs. uniprot
Match: A0A4D9CZ97_9STRA (DNA topoisomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ97_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.110e-60
Identity = 105/175 (60.00%), Postives = 132/175 (75.43%), Query Frame = 1
Query:    1 KDKKDLERQLVEEARGCQWLVLWLDCDREGENIAFEVIEVCLRRNRNMRILRARFSALIPREILNSVQRLTPPNEHQAKAVEARQEIDLRLGSAFTRFQTMRLQSRFDDLQDGVISYGPCQFPTLGFVVDRYKRIQAFQPEAFWSIKMEYA---EDDPSSPGGKARADFSWQRVR 516
            KDK+ LER L  EAR CQ L+LWLDCD EGENIAFEV++VC   N  +R+ RARFSALIPREI ++++ L  PN +Q++AV AR EIDLR+G+AFTRFQT++LQ +FD ++D +ISYGPCQFPT+GFVVDRYK I++FQ E FW I+M Y    E+    P G  R  F W+R R
Sbjct:   97 KDKEGLERCLKSEARACQRLILWLDCDLEGENIAFEVMDVCRAANSRLRVERARFSALIPREIWHALEHLVEPNVYQSEAVNARMEIDLRIGAAFTRFQTLKLQGKFDGVEDSIISYGPCQFPTMGFVVDRYKAIESFQREEFWRIQMAYRGARENGDEGPQGFTR--FQWKRER 269          
BLAST of mRNA_H-elongata_contig72657.14936.1 vs. uniprot
Match: A0A0L9UEG3_PHAAN (DNA topoisomerase n=2 Tax=Vigna TaxID=3913 RepID=A0A0L9UEG3_PHAAN)

HSP 1 Score: 198 bits (503), Expect = 9.330e-60
Identity = 108/174 (62.07%), Postives = 126/174 (72.41%), Query Frame = 1
Query:    4 DKKDLERQLVEEARGCQWLVLWLDCDREGENIAFEVIEVCLRRNRNMRILRARFSALIPREILNSVQRLTPPNEHQAKAVEARQEIDLRLGSAFTRFQTMRLQSRF--DDLQDG---VISYGPCQFPTLGFVVDRYKRIQAFQPEAFWSIKMEYAEDDPSSPGGKARADFSWQR 510
            DKKD++R L EEAR CQWLVLWLDCDREGENIAFEVI+VC   N ++ I RARFSALI REI +SVQ L  P +  A AV+ARQEIDLR+G++FTRFQTM ++  F  D   DG   V+SYGPCQFPTLGFVV+RY  IQA +PE FWSI   +  D      G+  A FSW R
Sbjct:   93 DKKDIKRTLEEEARRCQWLVLWLDCDREGENIAFEVIDVCTAVNPHLTIKRARFSALIEREIHHSVQNLEEPKKSLADAVDARQEIDLRIGASFTRFQTMLMKDAFAIDTATDGRNLVLSYGPCQFPTLGFVVERYWEIQAHEPEEFWSINCAHDSD------GRI-AKFSWMR 259          
BLAST of mRNA_H-elongata_contig72657.14936.1 vs. uniprot
Match: A0A453IUQ1_AEGTS (DNA topoisomerase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453IUQ1_AEGTS)

HSP 1 Score: 197 bits (502), Expect = 1.220e-59
Identity = 100/174 (57.47%), Postives = 127/174 (72.99%), Query Frame = 1
Query:    4 DKKDLERQLVEEARGCQWLVLWLDCDREGENIAFEVIEVCLRRNRNMRILRARFSALIPREILNSVQRLTPPNEHQAKAVEARQEIDLRLGSAFTRFQTMRLQSRF-----DDLQDGVISYGPCQFPTLGFVVDRYKRIQAFQPEAFWSIKMEYAEDDPSSPGGKARADFSWQR 510
            DK+D++R L EEAR CQWLVLWLDCDREGENIA+EV+++C   NRN+ I RARFSALIPREI  +VQ L  PN+  A AV+ARQEIDLR+G++FTRFQTM L+  F      + ++ V+SYGPCQFPTLGF+V+R+  IQA +PE FW+I   +  D+ +       A F W R
Sbjct:   82 DKQDIKRTLEEEARTCQWLVLWLDCDREGENIAYEVVDICAGANRNLNIWRARFSALIPREIHEAVQHLARPNKLFADAVDARQEIDLRIGASFTRFQTMLLKDAFVLDVSGEERNMVLSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCSHTSDEGT-------ASFIWIR 248          
BLAST of mRNA_H-elongata_contig72657.14936.1 vs. uniprot
Match: A0A1S4CAX6_TOBAC (DNA topoisomerase n=2 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CAX6_TOBAC)

HSP 1 Score: 198 bits (504), Expect = 1.430e-59
Identity = 102/174 (58.62%), Postives = 126/174 (72.41%), Query Frame = 1
Query:    4 DKKDLERQLVEEARGCQWLVLWLDCDREGENIAFEVIEVCLRRNRNMRILRARFSALIPREILNSVQRLTPPNEHQAKAVEARQEIDLRLGSAFTRFQTMRLQSRF-----DDLQDGVISYGPCQFPTLGFVVDRYKRIQAFQPEAFWSIKMEYAEDDPSSPGGKARADFSWQR 510
            DK D++R L EEARGCQW++LWLDCDREGENIAFEV+EVC + N N+ + RARFSALI REI  SVQ L  PN+  + AV+ RQEIDLR+G++FTRFQTM L+  F      D ++ V+SYGPCQFPTLGFVV+RY  IQA +PE FW+I   +  D+ S       A F+W R
Sbjct:  107 DKLDIKRTLEEEARGCQWIILWLDCDREGENIAFEVLEVCRQANHNLNVWRARFSALIDREIHQSVQTLVQPNQLFSDAVDVRQEIDLRIGASFTRFQTMLLRDAFVLDFATDDRNLVLSYGPCQFPTLGFVVERYWEIQAHEPEEFWTINCTHNFDEGS-------ATFNWMR 273          
BLAST of mRNA_H-elongata_contig72657.14936.1 vs. uniprot
Match: A0A6H5JJR2_9PHAE (DNA topoisomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR2_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 2.830e-59
Identity = 96/103 (93.20%), Postives = 100/103 (97.09%), Query Frame = 1
Query:    4 DKKDLERQLVEEARGCQWLVLWLDCDREGENIAFEVIEVCLRRNRNMRILRARFSALIPREILNSVQRLTPPNEHQAKAVEARQEIDLRLGSAFTRFQTMRLQ 312
            DKKDLERQLV+EARGCQWLVLWLDCDREGENIA+EVIEVC RRNRN+RILRARFSALIPR+ILNSVQ L PPNEHQAKAVEARQEIDLRLGSAFTRFQTMRLQ
Sbjct:   97 DKKDLERQLVDEARGCQWLVLWLDCDREGENIAYEVIEVCKRRNRNIRILRARFSALIPRDILNSVQNLVPPNEHQAKAVEARQEIDLRLGSAFTRFQTMRLQ 199          
BLAST of mRNA_H-elongata_contig72657.14936.1 vs. uniprot
Match: M1BH01_SOLTU (DNA topoisomerase n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1BH01_SOLTU)

HSP 1 Score: 193 bits (490), Expect = 3.720e-59
Identity = 99/174 (56.90%), Postives = 124/174 (71.26%), Query Frame = 1
Query:    4 DKKDLERQLVEEARGCQWLVLWLDCDREGENIAFEVIEVCLRRNRNMRILRARFSALIPREILNSVQRLTPPNEHQAKAVEARQEIDLRLGSAFTRFQTMRLQSRF-----DDLQDGVISYGPCQFPTLGFVVDRYKRIQAFQPEAFWSIKMEYAEDDPSSPGGKARADFSWQR 510
            DK D++R L  EAR CQW+VLWLDCDREGENIAFEV++VC + N N+ + RARFSALI REI  SVQ L  PN+  + AV+ RQEIDLR+G++FTRFQTM L+  F      D ++ V+SYGPCQFPTLGFVV+RY  IQA +PE FW+I   +  D+ +       A F+W R
Sbjct:   27 DKLDIKRTLEAEARSCQWIVLWLDCDREGENIAFEVLDVCRQANHNLNVWRARFSALIDREIHQSVQTLVQPNQLFSDAVDVRQEIDLRIGASFTRFQTMLLRGAFVLDFATDDRNIVLSYGPCQFPTLGFVVERYWEIQAHEPEEFWTINCTHNSDEGT-------ATFNWMR 193          
BLAST of mRNA_H-elongata_contig72657.14936.1 vs. uniprot
Match: A0A834WWY7_9FABA (DNA topoisomerase n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WWY7_9FABA)

HSP 1 Score: 206 bits (524), Expect = 9.920e-59
Identity = 106/174 (60.92%), Postives = 129/174 (74.14%), Query Frame = 1
Query:    4 DKKDLERQLVEEARGCQWLVLWLDCDREGENIAFEVIEVCLRRNRNMRILRARFSALIPREILNSVQRLTPPNEHQAKAVEARQEIDLRLGSAFTRFQTMRLQSRF-----DDLQDGVISYGPCQFPTLGFVVDRYKRIQAFQPEAFWSIKMEYAEDDPSSPGGKARADFSWQR 510
            DKKD++R L EEAR CQWLVLWLDCDREGENIAFEVIEVC+  NR++ + RARFSALI REI  SVQ L  PN+  A AV+ARQEIDLR+G++FTRFQTM ++  F      D ++ V+SYGPCQFPTLGF+V+RY  IQA +PE FWSI   +  D+ +       A+FSW R
Sbjct:   98 DKKDIKRTLEEEARRCQWLVLWLDCDREGENIAFEVIEVCMAANRHLTLKRARFSALIDREIHQSVQNLVEPNKWFADAVDARQEIDLRIGASFTRFQTMLMRDAFIIDSASDDRNLVLSYGPCQFPTLGFIVERYWEIQAHEPEEFWSINCSHKSDEGT-------ANFSWMR 264          
BLAST of mRNA_H-elongata_contig72657.14936.1 vs. uniprot
Match: A0A2Z7AKT5_9LAMI (DNA topoisomerase n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AKT5_9LAMI)

HSP 1 Score: 194 bits (493), Expect = 2.090e-58
Identity = 100/174 (57.47%), Postives = 125/174 (71.84%), Query Frame = 1
Query:    4 DKKDLERQLVEEARGCQWLVLWLDCDREGENIAFEVIEVCLRRNRNMRILRARFSALIPREILNSVQRLTPPNEHQAKAVEARQEIDLRLGSAFTRFQTMRLQSRF-----DDLQDGVISYGPCQFPTLGFVVDRYKRIQAFQPEAFWSIKMEYAEDDPSSPGGKARADFSWQR 510
            DK D+++ L EEAR CQWL+LWLDCDREGENIAFEV+EVC R NRN+ I RARFSALI R+I  +VQ L  PN+  A AV+ RQEIDLR+G++FTRFQTM L+  F      D ++ V+SYGPCQFPTLGFVV+R+  IQ+ +PE FW+I   +   + +       A FSW R
Sbjct:   96 DKSDIQKTLEEEARTCQWLILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDRDIHYAVQHLLRPNQLFADAVDVRQEIDLRIGASFTRFQTMLLRDAFVLDVSADDRNLVLSYGPCQFPTLGFVVERFWEIQSHEPEEFWTINCTHNSHEGT-------ASFSWMR 262          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72657.14936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7U2W4_9STRA2.370e-6560.57DNA topoisomerase n=1 Tax=Nannochloropsis gaditana... [more]
A0A453IUH3_AEGTS2.090e-6057.56DNA topoisomerase n=2 Tax=Aegilops tauschii subsp.... [more]
A0A4D9CZ97_9STRA2.110e-6060.00DNA topoisomerase n=1 Tax=Nannochloropsis salina C... [more]
A0A0L9UEG3_PHAAN9.330e-6062.07DNA topoisomerase n=2 Tax=Vigna TaxID=3913 RepID=A... [more]
A0A453IUQ1_AEGTS1.220e-5957.47DNA topoisomerase n=1 Tax=Aegilops tauschii subsp.... [more]
A0A1S4CAX6_TOBAC1.430e-5958.62DNA topoisomerase n=2 Tax=Nicotiana TaxID=4085 Rep... [more]
A0A6H5JJR2_9PHAE2.830e-5993.20DNA topoisomerase n=1 Tax=Ectocarpus sp. CCAP 1310... [more]
M1BH01_SOLTU3.720e-5956.90DNA topoisomerase n=1 Tax=Solanum tuberosum TaxID=... [more]
A0A834WWY7_9FABA9.920e-5960.92DNA topoisomerase n=1 Tax=Senna tora TaxID=362788 ... [more]
A0A2Z7AKT5_9LAMI2.090e-5857.47DNA topoisomerase n=1 Tax=Dorcoceras hygrometricum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72657contigH-elongata_contig72657:196..2563 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score204.9
Seed ortholog evalue3e-50
Seed eggNOG ortholog3880.AES72904
KEGG koko:K03165
KEGG Pathwayko03440,ko03460,map03440,map03460
KEGG ModuleM00414
EggNOG free text desc.Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand
EggNOG OGs37IA6@33090,3G9US@35493,4JM73@91835,COG0550@1,KOG1956@2759
EC5.99.1.2
COG Functional cat.L
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons4
Model size525
Cds size525
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72657.14936.1prot_H-elongata_contig72657.14936.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig72657 196..2563 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931128.4137588-CDS-H-elongata_contig72657:195..3121622931128.4137588-CDS-H-elongata_contig72657:195..312Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72657 196..312 -
1691679709.5643811-CDS-H-elongata_contig72657:195..3121691679709.5643811-CDS-H-elongata_contig72657:195..312Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72657 196..312 -
1622931128.4330957-CDS-H-elongata_contig72657:982..10781622931128.4330957-CDS-H-elongata_contig72657:982..1078Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72657 983..1078 -
1691679709.5785525-CDS-H-elongata_contig72657:982..10781691679709.5785525-CDS-H-elongata_contig72657:982..1078Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72657 983..1078 -
1622931128.448263-CDS-H-elongata_contig72657:1529..17241622931128.448263-CDS-H-elongata_contig72657:1529..1724Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72657 1530..1724 -
1691679709.592511-CDS-H-elongata_contig72657:1529..17241691679709.592511-CDS-H-elongata_contig72657:1529..1724Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72657 1530..1724 -
1622931128.4645405-CDS-H-elongata_contig72657:2446..25631622931128.4645405-CDS-H-elongata_contig72657:2446..2563Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72657 2447..2563 -
1691679709.611796-CDS-H-elongata_contig72657:2446..25631691679709.611796-CDS-H-elongata_contig72657:2446..2563Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72657 2447..2563 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig72657.14936.1

>prot_H-elongata_contig72657.14936.1 ID=prot_H-elongata_contig72657.14936.1|Name=mRNA_H-elongata_contig72657.14936.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
KDKKDLERQLVEEARGCQWLVLWLDCDREGENIAFEVIEVCLRRNRNMRI
LRARFSALIPREILNSVQRLTPPNEHQAKAVEARQEIDLRLGSAFTRFQT
MRLQSRFDDLQDGVISYGPCQFPTLGFVVDRYKRIQAFQPEAFWSIKMEY
AEDDPSSPGGKARADFSWQRVRGQ*
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mRNA from alignment at H-elongata_contig72657:196..2563-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig72657.14936.1 ID=mRNA_H-elongata_contig72657.14936.1|Name=mRNA_H-elongata_contig72657.14936.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2368bp|location=Sequence derived from alignment at H-elongata_contig72657:196..2563- (Himanthalia elongata Himel1 dioecious)
AAGGACAAGAAGGACCTTGAGCGGCAGCTGGTGGAGGAGGCGCGGGGATG CCAGTGGCTGGTGCTTTGGCTGGACTGTGACAGGGAGGGGGAGAACATCG CATTCGAGGTCATCGAGGTGCGATCAACGGGTCGCCACTGTATTATTAAT ATTAGCATGCGTTTGCGCCCCGACGCACGCTCCTTAAAACGTGCTGGTCG GTCGTATGTATCATGGTGCCTGGCATCCCTTCCCACACCCCCTGAAGCTT TTATTACATCTTTGGTACTCGCTCGGACAGCTCCTATTAAATCATAACAA TAGTGCTTGCGGCGAAGAGATCGCCCATCGTGTGGGCTCAGCCGCTATTC CGTTGTCTCCCCTTGACTTATTATTTACCTCCGACTCTGATATTTCCCTC AAATGGCTATCGTTTACCATCGCGAAATATCTCCCCGCGATACCCTAATG TTCAGGAAGACTCCCCCCCCCCTTTCTCTTTAGGAGAACCCGTCACAACG CCCCATTTCATCATTGTTGGAATGCGTGATCTATGCCCGTTAGGATACGG CATGCGTTTTGACGAAAGTACATACACCCCGCCACTGGGAGATAACGAAT GTATTGTTTCAAGGATTTCTCGGCGAGGTTCTTCGACGCCGAACTGCTAG ATATCGGGTGTGCCGGGAGGGGAGGGGGGGGGGGGGGGGGGGGGTATGGA GGTCTGTCCCCGGGGGGTATCCTCTTCAAATGTGACGGTGCTTCGTCCGT CCTTCGTCTATCCTTCCGCATTCTCGCTCTTGTCTTTGCGTGTGTATCGC CGGTTTGGGGATGCACGAAACATTCACTCTCAAACAAAGGTCTGCCTCAG ACGGAACCGAAACATGAGGATACTGCGCGCGAGGTTCTCCGCACTCATCC CGCGGGAGATCCTCAACAGCGTGCAGCGGCTGACGCCCCCCAACGAGCAC CAGGCCAAAGCCGTGGAGGCTCGGCAGGAGATAGATCTTCGCCTCGGCTC GGCATTCACGCGCTTCCAGACCATGCGGCTGCAGGTTTGGAGGAGAGGAG GAAGGGGCGTTCAAGAGAGGGCGCATTGGGATAAATAAATGCATGCTGTG CTGTGCTCTTCAATGATCCTGCAGTCACTCGGACGAGCGGGTTTCTTTTG AAAGGGATCTTTCAATTTTAACGCCGTGGGTGTGCTCTACCGGGTGGTTG TATTAATAGTACCTACAATTGGCGTCACCTTTTAAAAAGAAGAAAAAAAA GCAGCGCTCGGCCGTCCGGAGCGTTGTGCTTTTGCCCCGTACCATCTTAT GGTAATCATCGTCAATTGTGGGCGTTCCGCTGCCCCTTCTGATGTACAAG CTTTTCCCCCGCCCCCTTCCTTCCCTTTTTTTTTATTTTTGAATGATTAT TGTGGGGTGGGGGGGGGTTGTCCATTCTTTTATTTTTATCTGTTTCTCGT TTCTTTTCTCTTTACAAATGGTTTTACGAAAACAGAGTCGTTTCGACGAC TTGCAGGATGGCGTGATCAGCTATGGGCCCTGCCAGTTCCCAACGCTTGG CTTTGTCGTGGACCGTTACAAGCGAATACAGGTACACCGAATGTGATATA TTTCCTATCGCTATTTCCAAGCCTTGTGTTGATCCGTCGACGACGCCGCC GTTGCGCGTTGCTCGGGAACAGCCCCAGCCCCTAAAATTTAATGATAAAA GGGATTGGGGTTTCCTGTGTTCCAATGGTGGCGTTTTTTTTGGAACACCG TGCGGGCAGAATGGTGCACCCGCCCCACACCCCACACAACGGCGGGGCCC ACAGATGAAAACGTTATGGTTTGAAGCGGCGGCCTTACCGTGCGCGCTCT CTGTCCATCTTGTTTCTCTTGTTTCTCTCGTTCCTCTTTGCATGGCGGCT TACTTAAATTCGGGCAAAACGAAAACGTGGACCCTCTTTTCTCTCGTTCT CTCCCAATCCATGAAAACGAAGACTACGTTTTATGTTTATTCTTCGCCGC CGCCTTTGGCCTTCCCTCCCCTTCCCTCCCCTTCCCTACCCAAATATATA TATATTTATCCGTTCGTGGTTCTTTAGCTCTACGTCTTTGTCATATGTTT GTTTGTTTTACTACATTATCTAATTTACAAGCAAACATACACACATACAC ATATATACACACTCAAACTGTCCATCGATTATATCCACCGCGCCAGCATT TGTGTGTTTATGTGTGTTCCTCTGCGCTTCCGGTTTCCGTTGCTGAGACA GGCGTTCCAGCCAGAGGCATTCTGGAGCATCAAGATGGAGTACGCAGAGG ACGACCCCTCTTCTCCGGGGGGGAAAGCACGGGCAGACTTCTCGTGGCAG AGGGTGCGCGGACAATGA
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Coding sequence (CDS) from alignment at H-elongata_contig72657:196..2563-

>mRNA_H-elongata_contig72657.14936.1 ID=mRNA_H-elongata_contig72657.14936.1|Name=mRNA_H-elongata_contig72657.14936.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1050bp|location=Sequence derived from alignment at H-elongata_contig72657:196..2563- (Himanthalia elongata Himel1 dioecious)
AAGGACAAGAAGGACCTTGAGCGGCAGCTGGTGGAGGAGGCGCGGGGATG
CCAGTGGCTGGTGCTTTGGCTGGACTGTGACAGGGAGGGGGAGAACATCG
CATTCGAGGTCATCGAGAAGGACAAGAAGGACCTTGAGCGGCAGCTGGTG
GAGGAGGCGCGGGGATGCCAGTGGCTGGTGCTTTGGCTGGACTGTGACAG
GGAGGGGGAGAACATCGCATTCGAGGTCATCGAGGTCTGCCTCAGACGGA
ACCGAAACATGAGGATACTGCGCGCGAGGTTCTCCGCACTCATCCCGCGG
GAGATCCTCAACAGCGTGCAGCGGCTGACGCCCCCCAACGAGCACCAGGC
CAAAGCCGTGGAGGCTCGGCAGGAGATAGATCTTCGCCTCGGCTCGGCAT
TCACGCGCTTCCAGACCATGCGGCTGCAGGTCTGCCTCAGACGGAACCGA
AACATGAGGATACTGCGCGCGAGGTTCTCCGCACTCATCCCGCGGGAGAT
CCTCAACAGCGTGCAGCGGCTGACGCCCCCCAACGAGCACCAGGCCAAAG
CCGTGGAGGCTCGGCAGGAGATAGATCTTCGCCTCGGCTCGGCATTCACG
CGCTTCCAGACCATGCGGCTGCAGAGTCGTTTCGACGACTTGCAGGATGG
CGTGATCAGCTATGGGCCCTGCCAGTTCCCAACGCTTGGCTTTGTCGTGG
ACCGTTACAAGCGAATACAGAGTCGTTTCGACGACTTGCAGGATGGCGTG
ATCAGCTATGGGCCCTGCCAGTTCCCAACGCTTGGCTTTGTCGTGGACCG
TTACAAGCGAATACAGGCGTTCCAGCCAGAGGCATTCTGGAGCATCAAGA
TGGAGTACGCAGAGGACGACCCCTCTTCTCCGGGGGGGAAAGCACGGGCA
GACTTCTCGTGGCAGAGGGTGCGCGGACAATGAGCGTTCCAGCCAGAGGC
ATTCTGGAGCATCAAGATGGAGTACGCAGAGGACGACCCCTCTTCTCCGG
GGGGGAAAGCACGGGCAGACTTCTCGTGGCAGAGGGTGCGCGGACAATGA
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