prot_H-elongata_contig72385.14907.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72385.14907.1
Unique Nameprot_H-elongata_contig72385.14907.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length160
Homology
[Close]
BLAST of mRNA_H-elongata_contig72385.14907.1 vs. uniprot
Match: A0A6H5K0L0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L0_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 4.450e-51
Identity = 83/130 (63.85%), Postives = 101/130 (77.69%), Query Frame = 0 
Query:    3 PEFHTNLTTTASIALYRRFTARIVRIFIKVIPSGKMTCVWMDASWPVSYLYDMWRMNSAKGTS------EDIFMFLPTMAGQWSLDNQNFPETDTTLGVHTGNIPISTYNLTTANSTVTVLCTTFFSLVK 126
            PE HT+LTT+A+I LYR      +RIF+KVIP G  TC+WMD+SWPVSYL+D+WR N+A+G +       D FM LPT+ G W+LDN+N PETDTTLGVHTGN+P+STYNLTT  STVTVLCTTF S +K
Sbjct:  175 PELHTDLTTSAAITLYRSIVGSTIRIFVKVIPCGTATCLWMDSSWPVSYLFDLWRANAAEGCTCVFMGGIDAFMCLPTIPGLWNLDNRNLPETDTTLGVHTGNLPLSTYNLTTPKSTVTVLCTTFLSKIK 304
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72385.14907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0L0_9PHAE4.450e-5163.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72385contigH-elongata_contig72385:1025..2633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72385.14907.1mRNA_H-elongata_contig72385.14907.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72385 1025..2633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72385.14907.1 ID=prot_H-elongata_contig72385.14907.1|Name=mRNA_H-elongata_contig72385.14907.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bp
MTPEFHTNLTTTASIALYRRFTARIVRIFIKVIPSGKMTCVWMDASWPVS
YLYDMWRMNSAKGTSEDIFMFLPTMAGQWSLDNQNFPETDTTLGVHTGNI
PISTYNLTTANSTVTVLCTTFFSLVKTKESIKQYLVCEVGVEETAIMEIF
SHLVGCPEHP
back to top