mRNA_H-elongata_contig11934.1489.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11934.1489.1 vs. uniprot
Match: D7FTE9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE9_ECTSI) HSP 1 Score: 368 bits (945), Expect = 1.530e-122 Identity = 171/220 (77.73%), Postives = 197/220 (89.55%), Query Frame = 2
Query: 2 AKLFPGLPFAAEESDEQAMVPGVPQSRIDADGSINAEVYLALDPVDGTTNFACGGPDWGVTAAVVRRDVGPTHGVIYLPRKGIMVEAATGHGCRINGEVINFREGQVLKDSIVGAEMGKFVPDDRLQRLLGLVNHCMGIRNLFSSTGNTADLLAGVHGAWVHLKGGSVWDFAAGALAVKEAGGFVCDLQGQPLKWDKLKMEVVFAANEQIAQDVVRILGV 661
AK+ PGLPFAAEESDEQAM+PGVPQ+RI+ G + AE YLALDPVDGTTNFACGGPDWGV AAVV+RD GPTHGV+YLP ++VEAA GHGCR+NGE+I R+GQVL++ +V AE+GKFVPDDRLQRLLGLV+H MG+RNLFSSTGNTAD+L+GVHGAWVHLKGGSVWDFAAG+LAV+EAGGF CDLQG PLKWDKL MEVV AANE+IA+DVV +L +
Sbjct: 89 AKILPGLPFAAEESDEQAMIPGVPQARINPQGLVEAEAYLALDPVDGTTNFACGGPDWGVAAAVVQRDTGPTHGVLYLPGNDLVVEAARGHGCRVNGELIQLRKGQVLRECLVAAEIGKFVPDDRLQRLLGLVHHSMGVRNLFSSTGNTADVLSGVHGAWVHLKGGSVWDFAAGSLAVEEAGGFACDLQGNPLKWDKLHMEVVLAANEEIAKDVVNVLNI 308
BLAST of mRNA_H-elongata_contig11934.1489.1 vs. uniprot
Match: A0A3D3S434_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A3D3S434_9GAMM) HSP 1 Score: 141 bits (355), Expect = 3.970e-35 Identity = 82/204 (40.20%), Postives = 111/204 (54.41%), Query Frame = 2
Query: 11 FPGLPFAAEESDEQAMVPGVPQSRIDADGSINAEVYLALDPVDGTTNFACGGPDWGVTAAVVRRDVGPTHGVIYLPRKGIMVEAATGHGCRINGEVINFREGQVLKDSIVGAEMGKFVPDDRLQRLLGLVNHCMGIRNLFSSTGNTADLLAGVHGAWVHLKGGSVWDFAAGALAVKEAGGFVCDLQGQPLKWDKLKMEVVFAAN 622
FPGLP EES VP DGS +L D +DGT F+ G WGV A + D P H VI+LP G+ + AA G GC +NG+ + R G L D+++GAE K + + L LV +R S +T +LL+GV G +++L+GG +WDFAA AL + EAGG C G PL WD+++M +V AN
Sbjct: 56 FPGLPLLTEESPRH----DVP------DGS-----FLVADEIDGTAPFSAGSAQWGVMLAGM--DPAPRHAVIHLPDLGVTLTAARGEGCWLNGDRVTLRGGDALGDALLGAEFNKRLRPEEWAWLQRLVGATRAVRATACSAASTHELLSGVTGLYINLRGGRIWDFAAPALIICEAGGQTCAPDGGPLVWDRVEMGLVAGAN 242
BLAST of mRNA_H-elongata_contig11934.1489.1 vs. uniprot
Match: A0A2E0HMM3_9GAMM (Uncharacterized protein n=1 Tax=Pseudomonadales bacterium TaxID=1891229 RepID=A0A2E0HMM3_9GAMM) HSP 1 Score: 132 bits (333), Expect = 4.890e-32 Identity = 79/207 (38.16%), Postives = 114/207 (55.07%), Query Frame = 2
Query: 11 FPGLPFAAEESDEQAMVPGVPQSRIDADGSINAEVYLALDPVDGTTNFACGGPDWGVTAAVVRRDVGPTHGVIYLPRKGIMVEAATGHGCRINGEVINFREGQVLKDSIVGAEMGKFVPDDRLQRLLGLVNHCMGIRNLFSSTGNTADLLAGVHGAWVHLKGGSVWDFAAGALAVKEAGGFVCDLQGQPLKWDKLKMEVVFAANEQI 631
FP LP EES E +P P +L D +DGT F+ G DWGV A+V + GP+HGV+ LP +G++V AA G GC ING+ + G ++V ++ + + + QRL L C G+R+ + + +T +LLAG G +V+ GG +WDFA ALAV+EAGG V G L WD++ M +V A+E +
Sbjct: 69 FPDLPRVTEESAEHH-IPRPP--------------FLVADELDGTAPFSHGLGDWGVMLALVD-EAGPSHGVMVLPDRGVLVRAARGQGCVINGQPVALGPGDDPAATLVAMDLNRQLQPAQWQRLQKLAAACQGVRSHYCAAVSTYELLAGHLGLYVNCIGGRIWDFAVPALAVREAGGCVAAPAGGGLVWDRVPMGLVATADESL 259
BLAST of mRNA_H-elongata_contig11934.1489.1 vs. uniprot
Match: A0A7S4DFU3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFU3_HETAK) HSP 1 Score: 126 bits (316), Expect = 3.510e-31 Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = 2
Query: 311 EGQVLKDSIVGAEMGKFVPDDRLQRLLGLVN---------HCMGIRNLFSSTGNTADLLAGVHGAWVHLKGGSVWDFAAGALAVKEAGGFVCDLQGQPLKWDKLKMEVVFAANEQIAQDVVRILGV 661
E + L D +VGAE+ + + RL RL L+ +G+RNL SS GN DLL G GA+VHL+G SVWD AAGALAV+EAGGF CDL+G+PL+WD+LK+E V A +E +A+++V LG+
Sbjct: 9 EARRLADVLVGAEVHPLIEEGRLHRLARLMTGRHPAPGGARALGVRNLSSSVGNLVDLLEGHTGAFVHLRGASVWDLAAGALAVEEAGGFCCDLRGRPLRWDRLKVECVMAVSEGLAREIVAALGI 134
BLAST of mRNA_H-elongata_contig11934.1489.1 vs. uniprot
Match: A0A2M6WZM3_9BACT (Uncharacterized protein n=1 Tax=Candidatus Andersenbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_54_11 TaxID=1974485 RepID=A0A2M6WZM3_9BACT) HSP 1 Score: 124 bits (310), Expect = 7.200e-29 Identity = 70/217 (32.26%), Postives = 118/217 (54.38%), Query Frame = 2
Query: 11 FPGLPFAAEESDEQAMVPGVPQSRIDADGSINAEVYLALDPVDGTTNFACGGPDWGVTAAVVRRDVGPTHGVIYLPRK-GIMVEAATGHGCRINGEVINFREGQVLKDSIVGAEMGKFVPDDRLQRLLGLVNHCMGIRNLFSSTGNTADLLAGVHGAWVHLKGGSVWDFAAGALAVKEAGGFVCDLQGQPLKWDKLKMEVVFAANEQIAQDVVRILG 658
FPG+P EE E+ ++PG Y LDP+DGT + G P+WG + ++ D P GVIY+P + ++V A G+GC +NG+ + R + +I+ E+G + PD+ +L L + + + DL+ +++ + +WDFAAGA+AV+E GG VC+L G+PL+W+++ M +FA ++ +A +VV +L
Sbjct: 57 FPGIPILGEEQ-EKPVIPG--------------PTYFVLDPIDGTIPYNAGFPNWGTIVSYMQ-DGQPHAGVIYMPEQTSLIVTAERGNGCYLNGQRVVPRPARPRSQAIICVEIGPWTPDEAWPQLNRLRKIGRWLGGSGFAAASLVDLITQRGDLYLNFRA-KIWDFAAGAVAVQEIGGSVCNLNGEPLQWNQIDMTALFAHDQSLANEVVALLA 256
BLAST of mRNA_H-elongata_contig11934.1489.1 vs. uniprot
Match: A0A554J7S9_9BACT (Myo-inositol-1(Or 4)-monophosphatase n=1 Tax=Parcubacteria group bacterium Gr01-1014_106 TaxID=2017196 RepID=A0A554J7S9_9BACT) HSP 1 Score: 119 bits (297), Expect = 5.220e-27 Identity = 75/216 (34.72%), Postives = 114/216 (52.78%), Query Frame = 2
Query: 32 AEESDEQAMVPGV-------PQSRIDADGSINAEVY----LALDPVDGTTNFACGGPDWGVTAAVVRRDVGPTHGVIYLPRKGIMVEAATGHGCRINGEVINFREGQVLKDSIVGAEMGKFVPDDRLQRLLGLVNHCMGIRNLFSSTGNTADLLAGVHGAWVHLKGGSVWDFAAGALAVKEAGGFVCDLQGQPLKWDKLKMEVVFAANEQIAQDVV 646
A E D ++ G+ P+ + A+ NA DP DGTT + ++GVT +R D P GV+Y P+ G M+ A HGC + G+ I R + L +++G ++G + L+ L CM R+ ++ +LL G GA+ L +WD AAGALAV+EAGG VC GQPL+W+ L+M+ + AAN+Q+A+ V+
Sbjct: 40 ATEGDRRSQELGIRLIHAQMPEELVIAEEQANASSVPPNCTVFDPCDGTTIYYNNYSEFGVTLCTLR-DGRPYAGVMYFPKDGTMISAVRTHGCFMKGKRIRLRHDRPLDKTVIGTDIGPWTIHSVLEPLSQ--RFCM--RSSLAAIHGFRELLRGQSGAYYSLNIAKIWDVAAGALAVQEAGGIVCGPDGQPLQWNSLRMDWIAAANQQLAECVL 250
BLAST of mRNA_H-elongata_contig11934.1489.1 vs. uniprot
Match: UPI001FB00010 (inositol monophosphatase n=1 Tax=Leptospira perolatii TaxID=2023191 RepID=UPI001FB00010) HSP 1 Score: 112 bits (280), Expect = 1.130e-24 Identity = 61/216 (28.24%), Postives = 107/216 (49.54%), Query Frame = 2
Query: 5 KLFPGLPFAAEESDEQAMVPGVPQSRIDADGSINAEVYLALDPVDGTTNFACGGPDWGVTAAVVRRDVGPTHGVIYLPRKGIMVEAATGHGCRINGEVINFREGQVLKDSIVGAEMGKFVPDDRLQRLLGLVNHCMGIRNLFSSTGNTADLLAGVHGAWVHLKGGSVWDFAAGALAVKEAGGFVCDLQGQPLKWDKLKMEVVFAANEQIAQDVVRI 652
K F G+P EE + + +P E + D +DG+ F+ G P++ + + + P G IY P ++ A G G +NGE I+ + + L S+V E+ + D + + + M R L ++ +LL G +++L G +WDFAAGA+AV+EAGG + +L G P KWD+++M + + + + + V+R+
Sbjct: 52 KEFSGIPLVLEEQENKEPLP---------------ETCIVCDELDGSALFSRGIPEFSIVLSYIENKE-PKVGCIYFPASATIILAEKGKGASLNGEKISLQRSKPLSHSLVSLEINNTLLDGHFEWIRNVSKEAMASRALGATGAGFKELLEGKTDIFLNLNGAKIWDFAAGAVAVREAGGLLVNLDGNPQKWDRVRMSSIISRDGDLLEQVLRL 251
BLAST of mRNA_H-elongata_contig11934.1489.1 vs. uniprot
Match: V6H9L8_9LEPT (Inositol monophosphatase family protein n=1 Tax=Leptospira inadai serovar Lyme str. 10 TaxID=1049790 RepID=V6H9L8_9LEPT) HSP 1 Score: 110 bits (275), Expect = 6.400e-24 Identity = 64/214 (29.91%), Postives = 105/214 (49.07%), Query Frame = 2
Query: 11 FPGLPFAAEESDEQAMVPGVPQSRIDADGSINAEVYLALDPVDGTTNFACGGPDWGVTAAVVRRDVGPTHGVIYLPRKGIMVEAATGHGCRINGEVINFREGQVLKDSIVGAEMGKFVPDDRLQRLLGLVNHCMGIRNLFSSTGNTADLLAGVHGAWVHLKGGSVWDFAAGALAVKEAGGFVCDLQGQPLKWDKLKMEVVFAANEQIAQDVVRI 652
F G+P EE + +P Y+ D +DGT F+ G ++ V A V D P G IY P +V + G G ++ I FRE L S+V E+ + ++ + +V + + R+L ++ +LL G +++ G VWDFAAGA+A++EAGG + + +G+PL+WDK++M V + +A V R+
Sbjct: 60 FSGIPIVLEEQENSEPLP---------------TSYIVCDELDGTALFSRGMSEFSVIMAYVE-DGKPVAGCIYFPAMASIVLSERGKGTTVDDHKIVFREKSDLSHSVVSLEINNTLTNEDFSWIANVVKNSLASRSLAATGAGFRELLLGKTDLFLNFNGAKVWDFAAGAVAIEEAGGILLNKEGKPLEWDKIRMSGVICKDSSLASSVFRL 257
BLAST of mRNA_H-elongata_contig11934.1489.1 vs. uniprot
Match: T0GJC5_9LEPT (Inositol monophosphatase family protein n=2 Tax=Leptospira TaxID=171 RepID=T0GJC5_9LEPT) HSP 1 Score: 108 bits (269), Expect = 4.060e-23 Identity = 65/214 (30.37%), Postives = 103/214 (48.13%), Query Frame = 2
Query: 11 FPGLPFAAEESDEQAMVPGVPQSRIDADGSINAEVYLALDPVDGTTNFACGGPDWGVTAAVVRRDVGPTHGVIYLPRKGIMVEAATGHGCRINGEVINFREGQVLKDSIVGAEMGKFVPDDRLQRLLGLVNHCMGIRNLFSSTGNTADLLAGVHGAWVHLKGGSVWDFAAGALAVKEAGGFVCDLQGQPLKWDKLKMEVVFAANEQIAQDVVRI 652
F G+P EE + +P Y+ D +DGTT F+ G ++ V A V P G IY P G +V + G G ++G + F L SIV E+ + D+ + +V + + R+L ++ +LL G +++ G VWDFAAGA+AV+EAGG + +G+PL+WDK++M V + + V R+
Sbjct: 60 FSGIPIILEEQENSEPLP---------------TSYIVCDELDGTTLFSRGMSEFSVIMAYVEAGK-PVAGCIYFPATGSIVLSERGKGTTVDGRKVFFFGESDLSRSIVSLEINNTLADEDFVWIANVVKNSLASRSLAATGAGFRELLLGKTDLFLNFNGAKVWDFAAGAIAVEEAGGILLSKEGRPLEWDKIRMSGVICKDSGLISSVFRL 257
BLAST of mRNA_H-elongata_contig11934.1489.1 vs. uniprot
Match: A0A2N0A0A8_9LEPT (Inositol monophosphatase n=2 Tax=Leptospira TaxID=171 RepID=A0A2N0A0A8_9LEPT) HSP 1 Score: 105 bits (262), Expect = 3.750e-22 Identity = 63/216 (29.17%), Postives = 103/216 (47.69%), Query Frame = 2
Query: 5 KLFPGLPFAAEESDEQAMVPGVPQSRIDADGSINAEVYLALDPVDGTTNFACGGPDWGVTAAVVRRDVGPTHGVIYLPRKGIMVEAATGHGCRINGEVINFREGQVLKDSIVGAEMGKFVPDDRLQRLLGLVNHCMGIRNLFSSTGNTADLLAGVHGAWVHLKGGSVWDFAAGALAVKEAGGFVCDLQGQPLKWDKLKMEVVFAANEQIAQDVVRI 652
K FPG+P EE + P E ++ D +DGTT F+ G ++ V A V P G IY P + + G G IN + I ++G L S++ E+ D+ + + + + R L ++ +LL G +++L G +WDFAAG LA++EAGG D G PLKWD+++M + + + + ++V R+
Sbjct: 58 KEFPGIPLVMEEQNNHEPFP---------------ETFIVCDELDGTTLFSRGIKEFSVILAYVENG-SPQVGCIYFPALDTYLISQRGVGTFINEKKILLKKGGSLDRSVLSLEINNTFQDEDYRWIANASKNTLATRALAATGAGFLELLEGKTDLFMNLSGAKIWDFAAGVLALEEAGGIALDKIGNPLKWDRIRMSALLSRDRDLLKEVYRL 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11934.1489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11934.1489.1 >prot_H-elongata_contig11934.1489.1 ID=prot_H-elongata_contig11934.1489.1|Name=mRNA_H-elongata_contig11934.1489.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp MVPGVPQSRIDADGSINAEVYLALDPVDGTTNFACGGPDWGVTAAVVRRDback to top mRNA from alignment at H-elongata_contig11934:484..3598+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11934.1489.1 ID=mRNA_H-elongata_contig11934.1489.1|Name=mRNA_H-elongata_contig11934.1489.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3115bp|location=Sequence derived from alignment at H-elongata_contig11934:484..3598+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11934:484..3598+ >mRNA_H-elongata_contig11934.1489.1 ID=mRNA_H-elongata_contig11934.1489.1|Name=mRNA_H-elongata_contig11934.1489.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig11934:484..3598+ (Himanthalia elongata Himel1 dioecious)back to top |