mRNA_H-elongata_contig7094.14751.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7094.14751.1
Unique NamemRNA_H-elongata_contig7094.14751.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig7094.14751.1 vs. uniprot
Match: D8LCY2_ECTSI (Holliday junction resolvase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY2_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 4.250e-62
Identity = 101/141 (71.63%), Postives = 126/141 (89.36%), Query Frame = 3 
Query:    3 SFGVAISDDTKTFAMPVTKVLRRDSTRKLDPSVVLRKLRTFLHESNTCGLVVGWPLSRSGQAKGQCLMVLQFLRELHLKGKIDIPVTLWDERLTSVEARDILEEDGMGRRTADREDEIAAMVILQGFLDSAEADRGGLSTL 425
            +FGVA+SD+TKT A P+T+V RR ST+KLDP++V+ KLR  + + + CGLVVGWPLS+SG+A+GQCLMVLQFLR+LHL+GK+DIPVTL+DER+TSVEAR IL++DG+GR+ A+REDE AAMVILQGFLDSAEA  GGLSTL
Sbjct:  109 NFGVAVSDETKTLAFPLTRVPRRQSTKKLDPALVIGKLREIVEDCSACGLVVGWPLSKSGRAEGQCLMVLQFLRQLHLRGKVDIPVTLFDERMTSVEARGILKDDGLGRKIAEREDETAAMVILQGFLDSAEAVHGGLSTL 249
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BLAST of mRNA_H-elongata_contig7094.14751.1 vs. uniprot
Match: A0A7S4D9E5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9E5_HETAK)

HSP 1 Score: 87.4 bits (215), Expect = 1.890e-16
Identity = 54/136 (39.71%), Postives = 73/136 (53.68%), Query Frame = 3 
Query:    3 SFGVAISDDTKTFAMPVTKVLRRDSTRKLDPSV-VLRKLRTFLHESNTCGLVVGWPLSRSGQAKGQCLMVLQFLRELHLKGKIDIPVTLWDERLTSVEARDILEEDGMGR-RTADREDEIAAMVILQGFLDSAEAD 404
            + GVA SD T +FA P+ K+ R   T + D    +  KL+  + E    G VVGWPL   G    QC  VL FL  +H   ++ IP+ LWDER TSV+AR  L +   G+ R    ED++AA +IL+  L     D
Sbjct:   46 NIGVAFSDATYSFASPLKKLQRMRPTYRQDSMQNISSKLQKVIAEQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAAALILKDLLPEDTGD 181
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BLAST of mRNA_H-elongata_contig7094.14751.1 vs. uniprot
Match: A0A2V8LSD1_9BACT (Putative pre-16S rRNA nuclease n=2 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A2V8LSD1_9BACT)

HSP 1 Score: 80.5 bits (197), Expect = 1.420e-14
Identity = 53/131 (40.46%), Postives = 70/131 (53.44%), Query Frame = 3 
Query:    3 SFGVAISDDTKTFAMPVTKVLRRDSTRKLDPSVVLRKLRTFLHESNTCGLVVGWPLSRSGQAKGQCLMVLQFLRELHLKGKIDIPVTLWDERLTSVEARDILEEDGMG-RRTADREDEIAAMVILQGFLDS 392
            + G+AISD     A P      R + R+ D    L  LR    E+    +VVG PL  SG    Q   V +F  ++H    +DIPV  WDERLTS  A   LEE G+  R+  ++ D+IAAM+ILQ +LDS
Sbjct:   12 TIGIAISDALLLTAQP------RPTIRRKDVKTDLEALRRLTEENEVHEIVVGQPLHMSGHQSPQSEKVARFAEQIHKV--LDIPVVFWDERLTSFAAEQHLEEMGLNWRKRREQVDKIAAMIILQNYLDS 134
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BLAST of mRNA_H-elongata_contig7094.14751.1 vs. uniprot
Match: A0A2V8TNH5_9BACT (Putative pre-16S rRNA nuclease n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8TNH5_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 5.030e-14
Identity = 53/129 (41.09%), Postives = 70/129 (54.26%), Query Frame = 3 
Query:    9 GVAISDDTKTFAMPVTKVLRRDSTRKLDPSVVLRKLRTFLHESNTCGLVVGWPLSRSGQAKGQCLMVLQFLRELHLKGKIDIPVTLWDERLTSVEARDILEEDGMG-RRTADREDEIAAMVILQGFLDS 392
            GVAISD     A        R + R+ D  V L  LR    E+    +VVG PL   G+   Q   V +F +ELH    +D+P+  WDERLTS  A   LEE G+  R+  ++ D+IAAM+ILQ +LDS
Sbjct:   14 GVAISDSLLLTAQS------RPTLRRKDLKVDLEALRRLAEENEVHEVVVGQPLHMDGKESPQSQKVARFAQELHRV--LDLPIVFWDERLTSFAAEQHLEEMGLNWRQRREQVDKIAAMIILQNYLDS 134
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BLAST of mRNA_H-elongata_contig7094.14751.1 vs. uniprot
Match: A0A2V8N2C7_9BACT (Putative pre-16S rRNA nuclease n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8N2C7_9BACT)

HSP 1 Score: 77.8 bits (190), Expect = 1.300e-13
Identity = 51/131 (38.93%), Postives = 72/131 (54.96%), Query Frame = 3 
Query:    3 SFGVAISDDTKTFAMPVTKVLRRDSTRKLDPSVVLRKLRTFLHESNTCGLVVGWPLSRSGQAKGQCLMVLQFLRELHLKGKIDIPVTLWDERLTSVEARDILEEDGMG-RRTADREDEIAAMVILQGFLDS 392
            + GVAISD     A        R + R+ D +  + KLR    E+    +VVG PL   GQ   Q   V +F  +L  +  +D+P+  WDERLTS EA   LE+ G+  R+  ++ D+IAAM+ILQ +LDS
Sbjct:   12 TIGVAISDALLLTAQA------RPTVRRKDIAADIEKLRRLAQENEVHEVVVGQPLHMDGQPSPQSQKVARFAEQL--RKVLDLPIIFWDERLTSFEAEQHLEQMGLNWRQRREQVDKIAAMIILQNYLDS 134
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BLAST of mRNA_H-elongata_contig7094.14751.1 vs. uniprot
Match: A0A2G4YNK4_9PROT (Putative pre-16S rRNA nuclease n=2 Tax=Paremcibacter congregatus TaxID=2043170 RepID=A0A2G4YNK4_9PROT)

HSP 1 Score: 77.8 bits (190), Expect = 1.820e-13
Identity = 51/136 (37.50%), Postives = 72/136 (52.94%), Query Frame = 3 
Query:    3 SFGVAISDDTKTFAMPVTKVLRRDSTRKLDPSVVLRKLRTFLHESNTCGLVVGWPLSRSGQAKGQCLMVLQFLRELHLKGKIDIPVTLWDERLTSVEA-RDILEEDGMGRRTADREDEIAAMVILQGFLDSAEADR 407
            + GVA+SD     A P+  + R   T+  +      +L T + E N  GLV+G PL+  G    +C    QF    ++ GKIDIPV LWDERL++V   R +L+ D   +R  +  D++AA  ILQG LD     R
Sbjct:   27 TIGVALSDIMCNIATPMEIIRRTKFTKDAE------RLLTIISEQNVGGLVLGLPLNMDGTEGPRCQSTRQFAE--NMAGKIDIPVVLWDERLSTVAVTRTLLDADASRKRRKEVVDKMAAAYILQGALDKMSYSR 154
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BLAST of mRNA_H-elongata_contig7094.14751.1 vs. uniprot
Match: A0A2A4TD98_9PROT (Putative pre-16S rRNA nuclease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2A4TD98_9PROT)

HSP 1 Score: 77.4 bits (189), Expect = 2.750e-13
Identity = 48/130 (36.92%), Postives = 72/130 (55.38%), Query Frame = 3 
Query:    3 SFGVAISDDTKTFAMPVTKVLRRDSTRKLDPSVVLRKLRTFLHESNTCGLVVGWPLSRSGQAKGQCLMVLQFLRELHLKGKIDIPVTLWDERL-TSVEARDILEEDGMGRRTADREDEIAAMVILQGFLD 389
            + GVA+SD     A P+  + R   T+  +      +L T + E N  GL++G+PL+  G    +C    QF + ++  GKI+IP+ LWDERL T+   R +LE D   +R  +  D++AA  ILQG LD
Sbjct:   32 TIGVALSDIMCNIATPMEIIRRTKFTKDAE------RLMTIIGEQNVGGLILGFPLNMDGTEGPRCQSTRQFAQNIY--GKIEIPIALWDERLSTAAVTRTLLEADASRKRRKEVIDKMAAAYILQGALD 153
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BLAST of mRNA_H-elongata_contig7094.14751.1 vs. uniprot
Match: A0A7V6D5R3_9CHLR (Putative pre-16S rRNA nuclease n=2 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V6D5R3_9CHLR)

HSP 1 Score: 77.4 bits (189), Expect = 2.810e-13
Identity = 54/131 (41.22%), Postives = 73/131 (55.73%), Query Frame = 3 
Query:    9 GVAISDDTKTFAMPVTKVLRRDSTRKLDPSVVLRKLRTFLHESNTCGLVVGWPLSRSGQAKGQCLMVLQFLRELHLKGKIDIPVTLWDERLTSVEARDILEEDG-MGRRTADREDEIAAMVILQGFLDSAE 398
            GVA+SD    +A P+T + RR  +R+ D   + R  R    E     +VVG PLS  GQ   Q L V ++   L     +DIPV LWDERL++ EA  +L+E G   R+   R D +AA VILQ +LD+ E
Sbjct:   29 GVAVSDPLGLWARPLTVITRR--SRQEDYRAIARLAR----EHEAARIVVGHPLSMDGQVGPQALRVERYAAGL--AEYLDIPVVLWDERLSTAEAERLLQESGETWRQYRGRIDAVAAAVILQSYLDAVE 151
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BLAST of mRNA_H-elongata_contig7094.14751.1 vs. uniprot
Match: A7NQA7_ROSCS (Putative pre-16S rRNA nuclease n=2 Tax=Roseiflexus castenholzii TaxID=120962 RepID=A7NQA7_ROSCS)

HSP 1 Score: 75.5 bits (184), Expect = 9.910e-13
Identity = 50/129 (38.76%), Postives = 74/129 (57.36%), Query Frame = 3 
Query:    9 GVAISDDTKTFAMPVTKVLRRDSTRKLDPSVVLRKLRTFLHESNTCGLVVGWPLSRSGQAKGQCLMVLQFLRELHLKGKIDIPVTLWDERLTSVEA-RDILEEDGMGRRTADREDEIAAMVILQGFLDS 392
            GVA+SD T+T A P+T +      R    +  L+++ + + E +   LVVG PL+ SG    Q  +V QF+ EL  +  I IP+T  DERLT+V A R +++      +   R DE+AA +ILQ FLD+
Sbjct:   20 GVALSDPTRTLATPLTTI------RAKPRATALKRIASLIREHDVAALVVGLPLTMSGDVGPQAALVQQFVEEL--RRAIAIPLTFVDERLTTVAAERMMIDLKLKPEQRKARIDEVAASIILQDFLDA 140
[Close]
BLAST of mRNA_H-elongata_contig7094.14751.1 vs. uniprot
Match: A0A800D7F6_9CHLR (Putative pre-16S rRNA nuclease n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A800D7F6_9CHLR)

HSP 1 Score: 75.1 bits (183), Expect = 1.260e-12
Identity = 52/129 (40.31%), Postives = 75/129 (58.14%), Query Frame = 3 
Query:    9 GVAISDDTKTFAMPVTKVLRRDSTRKLDPSVVLRKLRTFLHESNTCGLVVGWPLSRSGQAKGQCLMVLQFLRELHLKGKIDIPVTLWDERLTSVEARDILEEDGMG-RRTADREDEIAAMVILQGFLDS 392
            GVA+SD ++T A  + KVL R S +  D    +R+L   + E     ++VG P S  G   GQ  +V  F+REL  +  + +P+ LWDERL++V A  +L E G+  R+   R D +AA VILQ +LDS
Sbjct:   21 GVAVSDPSQTLARSL-KVLERRSLQ--DDIAAIRRL---VEELQVVQIIVGHPRSMDGTVGGQARLVEGFVREL--EQALQVPILLWDERLSTVTAARLLSERGVSARKQRGRIDSVAAAVILQDYLDS 141
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7094.14751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCY2_ECTSI4.250e-6271.63Holliday junction resolvase-like protein n=1 Tax=E... [more]
A0A7S4D9E5_HETAK1.890e-1639.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2V8LSD1_9BACT1.420e-1440.46Putative pre-16S rRNA nuclease n=2 Tax=unclassifie... [more]
A0A2V8TNH5_9BACT5.030e-1441.09Putative pre-16S rRNA nuclease n=1 Tax=Acidobacter... [more]
A0A2V8N2C7_9BACT1.300e-1338.93Putative pre-16S rRNA nuclease n=1 Tax=Acidobacter... [more]
A0A2G4YNK4_9PROT1.820e-1337.50Putative pre-16S rRNA nuclease n=2 Tax=Paremcibact... [more]
A0A2A4TD98_9PROT2.750e-1336.92Putative pre-16S rRNA nuclease n=1 Tax=Alphaproteo... [more]
A0A7V6D5R3_9CHLR2.810e-1341.22Putative pre-16S rRNA nuclease n=2 Tax=Anaerolinea... [more]
A7NQA7_ROSCS9.910e-1338.76Putative pre-16S rRNA nuclease n=2 Tax=Roseiflexus... [more]
A0A800D7F6_9CHLR1.260e-1240.31Putative pre-16S rRNA nuclease n=1 Tax=Anaerolinea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7094contigH-elongata_contig7094:922..3849 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score68.2
Seed ortholog evalue3.4e-09
Seed eggNOG ortholog911045.PSE_3776
Preferred nameyqgF
KEGG koko:K07447
GOsGO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360
EggNOG free text desc.Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
EggNOG OGs1RDHZ@1224,2U98Y@28211,COG0816@1,COG0816@2
COG Functional cat.L
Best tax levelAlphaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Exons6
Model size1237
Cds size399
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7094.14751.1prot_H-elongata_contig7094.14751.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7094 966..3055 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931107.9840417-UTR-H-elongata_contig7094:921..9651622931107.9840417-UTR-H-elongata_contig7094:921..965Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7094 922..965 +
1691679701.3635685-UTR-H-elongata_contig7094:921..9651691679701.3635685-UTR-H-elongata_contig7094:921..965Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7094 922..965 +
1622931108.1081371-UTR-H-elongata_contig7094:3055..38491622931108.1081371-UTR-H-elongata_contig7094:3055..3849Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7094 3056..3849 +
1691679701.4404385-UTR-H-elongata_contig7094:3055..38491691679701.4404385-UTR-H-elongata_contig7094:3055..3849Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7094 3056..3849 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931108.0011067-CDS-H-elongata_contig7094:965..10081622931108.0011067-CDS-H-elongata_contig7094:965..1008Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7094 966..1008 +
1691679701.3766015-CDS-H-elongata_contig7094:965..10081691679701.3766015-CDS-H-elongata_contig7094:965..1008Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7094 966..1008 +
1622931108.0152538-CDS-H-elongata_contig7094:1498..15631622931108.0152538-CDS-H-elongata_contig7094:1498..1563Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7094 1499..1563 +
1691679701.3874042-CDS-H-elongata_contig7094:1498..15631691679701.3874042-CDS-H-elongata_contig7094:1498..1563Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7094 1499..1563 +
1622931108.0327902-CDS-H-elongata_contig7094:1837..19301622931108.0327902-CDS-H-elongata_contig7094:1837..1930Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7094 1838..1930 +
1691679701.3983996-CDS-H-elongata_contig7094:1837..19301691679701.3983996-CDS-H-elongata_contig7094:1837..1930Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7094 1838..1930 +
1622931108.0508366-CDS-H-elongata_contig7094:2309..23881622931108.0508366-CDS-H-elongata_contig7094:2309..2388Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7094 2310..2388 +
1691679701.4096303-CDS-H-elongata_contig7094:2309..23881691679701.4096303-CDS-H-elongata_contig7094:2309..2388Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7094 2310..2388 +
1622931108.0733013-CDS-H-elongata_contig7094:2610..26631622931108.0733013-CDS-H-elongata_contig7094:2610..2663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7094 2611..2663 +
1691679701.4196484-CDS-H-elongata_contig7094:2610..26631691679701.4196484-CDS-H-elongata_contig7094:2610..2663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7094 2611..2663 +
1622931108.0917678-CDS-H-elongata_contig7094:2989..30551622931108.0917678-CDS-H-elongata_contig7094:2989..3055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7094 2990..3055 +
1691679701.429969-CDS-H-elongata_contig7094:2989..30551691679701.429969-CDS-H-elongata_contig7094:2989..3055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7094 2990..3055 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7094.14751.1

>prot_H-elongata_contig7094.14751.1 ID=prot_H-elongata_contig7094.14751.1|Name=mRNA_H-elongata_contig7094.14751.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
MPVTKVLRRDSTRKLDPSVVLRKLRTFLHESNTCGLVVGWPLSRSGQAKG
QCLMVLQFLRELHLKGKIDIPVTLWDERLTSVEARDILEEDGMGRRTADR
EDEIAAMVILQGFLDSAEADRGGLSTLRSKPD*
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mRNA from alignment at H-elongata_contig7094:922..3849+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7094.14751.1 ID=mRNA_H-elongata_contig7094.14751.1|Name=mRNA_H-elongata_contig7094.14751.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2928bp|location=Sequence derived from alignment at H-elongata_contig7094:922..3849+ (Himanthalia elongata Himel1 dioecious)
CCAGCTTCGGAGTTGCTATCTCGGACGATACGAAGACTTTTGCAATGCCG
GTCACCAAGGTCCTACGGCGGGATTCGACGAGAAAACGTGAGTTTTTTTT
TGTGTTTTTTTTACCACGCCGAGTTATCGTTATAAGTTCCGTCGGCTGAG
TTGGCCCGTGATACATCACCAATAAATAGAGGCATGTTAGAGCTTATGGA
CACCCCGCAGTCGTGACGCTACAATATCTAGATGCTCTGCTTATATCCTG
CGCATTATCGTAAGGGTGCGGGTGTTGTGGCGATTGAGCGCCGGTCCGGG
GACATGCGTGTAGTCAGGCATGAGGGTGTTCGGCCGTAGGGTGCTCACTT
GCTGTCCTCTCCGGCAGGTGCTAGCATTTTATGCGACTTTGCTCTTATTT
CTGTCTCAGAAGCGAATGAAGTCGGCTACGCGTGTTCTGTATGCCATCGC
GTGCCTACGCCGTCAGCTCATTCGCGACTTCGAAACGCCCCCGCTAATCC
CCCCCTCCCTCGATCCCCAAACCCTGCACCATTTACATGGCGGCACGCCC
CACGCATTCATGCGTCTGTGGCAACAGTGGATCCATCCGTGGTTCTGCGA
AAATTGAGGACATTTCTCCACGAGAGTAACACGTGTGGACTAGTGAGTAC
TCGGACAGGATGCTGATGTGGAAGGAACTCCCGTGCGTAGGCATAATTAA
TCGCTCGTGAGCCTGTTAAATTACTGTTACCGTGCTCATCTCTTCGTAAT
TTCAACATGGCGTCTAAGGAGGACGCAGTTTCCGAAGTCGGTCCCATACA
AGTAGTCGATTTCGCGGGGCTACGTGAGCACGCCGTGACGCGGACCCTTA
CAGCGAAGTCGATCCCATCGTTCATGGTCGTCTTCGCTTCTCTTGTCTCC
GTGTGGATCGATGTAGGTGGTGGGTTGGCCGCTTTCGCGATCTGGCCAGG
CAAAGGGCCAGTGCCTGATGGTATTGCAGTTTCTGCGGGAGTTGCATCTG
AAGGGAAAGGTGAAGCTTAGTCGAGATCGGCGAAGCACGGAATGTCAAAT
GCTTAATTAATTCTTCAGCAATAATATTTGCTGGTATTTTGATTTTTTAA
AGATCAACCCCGAGTATAGTCGTTACTTTTTCAGTTGCATGCCGCCCCGC
CGCCGCCGAGCCGTTCCGTTGTCGCCAAAATTTAAAATTCCGTCTAGAGC
TTTGTTTTTTTTTCGAAAAAACGACGTGTTTGCAGCATCCAAAATCCGTT
GGGAATATTCAGCTCTCAGCGCACAAACGCGGAATTCCTGTTTTTATCAC
TTCCTGGGGCGACTACTGAAATTGTTATTTAATAGTTGTTTTTGTTGGGT
GTGTGTTTGGGGTGGGGGGGGGGTGTCGTCGAACCAAGATCGATATCCCA
GTGACTCTGTGGGACGAGCGCCTGACGTCAGTGGAGGCTCGAGACATTCT
CGAAGAGGATGGCATGGGTGAGTCTTGTACGACCTCCAGGAGATGGTTCT
GGCGCTTCGCGTGGAGTTGGGTATTATGCACACGGCGCGTAGCTTGTTGA
ATTGTTGCAAGCGTGTTACCTCGTTCCGTCTTGATGGACCGATGCGTTCG
CGCTAAGATATCGTTGGGCGAGCAACTGTCGAATGCCCTAAAAACTTTCT
TTTCTTTTATCTGCTCTTTCTTGCCAATTTCGTAAGCAGGTCGTCGCACT
GCCGATCGAGAAGACGAAATCGCAGCGATGGTTATCCTCCAGGTGAGGGT
GAGGCATGGGAACATGGCAAATAACAAGTAGGTTGGCTCTGTCCGCCCCC
CTCCCTGTTGTGTGATACCGATCCTGCTTGGCGCATGCTCCCCGACTGTT
TTCATGGCTTTTCGGCGATCGATCCTTAAAATACCAAAATGACTAGTTTT
TGCTCAGACATCATGTCCTGGAGACCCTCGTCTCAGCTCACTTGGAATAA
GCTCGAGGCTGCGAGTAATAGAAGAAAATAAATATATATATATATATATA
TATATGGCCCCACGACACTCAAGCTTTATCCGCTGTGCTGTCGTTTCCAC
TTGAATAAAAATGCACAGGGCTTTCTGGACAGTGCCGAGGCCGACCGTGG
AGGTCTCTCTACATTACGTAGTAAACCTGATTAGGATGCGTCAAAGTAAT
TCCGGGGCGGTGGGGATAATTTTATCTTGATATTCATTTCTTCGAGTGTA
AGTTGCCGGCCGGTTTATGTGGCCGTGGTACCCTTTTTTTTTATCAATTT
GCATTAAACCGCGCAAACTGGCATGACAGGTAAGGGGGCGCCATGCCGGT
TTGCAAATCCCCCCCCCCCCTAGCTCAGTTAAGTATATCGGCCACTACCG
CTTGTGGTGTTACGGTTTCACTTCCCTTCCTTTTTCAAAATTTTTTCCGC
GTAACGGGACTTATCGTGTTCCGGGTTCGTTGATCGGCCCTTACAGACGT
GTAGATACAATCGAAGCAAAAACTAGTCTCGGAGTCGGTCGGTGCTGAAC
AACAAAAAGTGGATTCATGTGACCTTCGACGACCCGACCTTTAGGAAAAT
GAAAGGAATAATGCACCTGGCCCGCGCGTGAAGTTTCAACGCTCGCTCAA
TAAGTTGTACCGGTCGAGAGCGAGTCGAGTTTGGTGTAGACTTTTAAGTT
TCCGGCTACGGAGCGAGACCCAGTACGAGAAGCTTGTTATGCGTGACTTC
ACTTCGCAGATAGAGATTAATCAACGCAAACCGGGGCTGGCTGCATTCGT
AGGATTGCAGTAACGGCATTGTCAGAGCATTGCAGGAAGAGACCACGTCG
TGATCGATTTCGCGCGCGAGTGATGCTTCGTATGCGCGGAGCCCGGGCTC
CTGTCGTTAAAAGAAAACTGGATCGATCGCCATGATTTGAGACCAAAAAA
TAATAATATATCATCGGTACGTTGTGCG
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Coding sequence (CDS) from alignment at H-elongata_contig7094:922..3849+

>mRNA_H-elongata_contig7094.14751.1 ID=mRNA_H-elongata_contig7094.14751.1|Name=mRNA_H-elongata_contig7094.14751.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=798bp|location=Sequence derived from alignment at H-elongata_contig7094:922..3849+ (Himanthalia elongata Himel1 dioecious)
ATGCCGGTCACCAAGGTCCTACGGCGGGATTCGACGAGAAAACATGCCGG
TCACCAAGGTCCTACGGCGGGATTCGACGAGAAAACTGGATCCATCCGTG
GTTCTGCGAAAATTGAGGACATTTCTCCACGAGAGTAACACGTGTGGACT
ATGGATCCATCCGTGGTTCTGCGAAAATTGAGGACATTTCTCCACGAGAG
TAACACGTGTGGACTAGTGGTGGGTTGGCCGCTTTCGCGATCTGGCCAGG
CAAAGGGCCAGTGCCTGATGGTATTGCAGTTTCTGCGGGAGTTGCATCTG
AAGGGAAAGGTGGTGGGTTGGCCGCTTTCGCGATCTGGCCAGGCAAAGGG
CCAGTGCCTGATGGTATTGCAGTTTCTGCGGGAGTTGCATCTGAAGGGAA
AGATCGATATCCCAGTGACTCTGTGGGACGAGCGCCTGACGTCAGTGGAG
GCTCGAGACATTCTCGAAGAGGATGGCATGGATCGATATCCCAGTGACTC
TGTGGGACGAGCGCCTGACGTCAGTGGAGGCTCGAGACATTCTCGAAGAG
GATGGCATGGGTCGTCGCACTGCCGATCGAGAAGACGAAATCGCAGCGAT
GGTTATCCTCCAGGTCGTCGCACTGCCGATCGAGAAGACGAAATCGCAGC
GATGGTTATCCTCCAGGGCTTTCTGGACAGTGCCGAGGCCGACCGTGGAG
GTCTCTCTACATTACGTAGTAAACCTGATTAGGGCTTTCTGGACAGTGCC
GAGGCCGACCGTGGAGGTCTCTCTACATTACGTAGTAAACCTGATTAG
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