mRNA_H-elongata_contig70591.14717.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: D8LF53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF53_ECTSI) HSP 1 Score: 158 bits (399), Expect = 3.330e-48 Identity = 65/70 (92.86%), Postives = 70/70 (100.00%), Query Frame = 1
Query: 1 YKKELSPLMPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAGEKW 210
YKKELSPL+PPACRFLPTCSVYGV+AIEKFGPTKGAVLTAWRLMRCNPFAGYG+DYP+WPPPGWFAGE+W
Sbjct: 86 YKKELSPLIPPACRFLPTCSVYGVQAIEKFGPTKGAVLTAWRLMRCNPFAGYGVDYPQWPPPGWFAGERW 155
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A835ZNH9_9STRA (Hemolytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNH9_9STRA) HSP 1 Score: 119 bits (298), Expect = 5.710e-33 Identity = 48/67 (71.64%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 1 YKKELSPLMPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAG 201
YK+E+SPL+PPACRF PTCSVY VE+IE+FG +G VLTAWRL+RC P GYG D P+WPPP WFAG
Sbjct: 75 YKREISPLLPPACRFFPTCSVYAVESIEEFGAWRGFVLTAWRLLRCTPVGGYGYDPPQWPPPNWFAG 141
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A7S1U9Q3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9Q3_9STRA) HSP 1 Score: 116 bits (291), Expect = 8.790e-32 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 1 YKKELSPLMPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAG 201
YK+E+SP M PACRFLPTCS Y +++I+ +GP KG VLTAWR++RCNPF G G D P+WPPPGWFAG
Sbjct: 82 YKREISPSMAPACRFLPTCSGYSIDSIKTYGPWKGLVLTAWRILRCNPFGGSGYDPPQWPPPGWFAG 148
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A4D9DFE3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFE3_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.890e-31 Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 1 YKKELSPLMPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAG 201
YK+ +SPL+P ACRF PTCS Y +E+++KFGP KGAVLTAWRL+RCNP G G D P+WPPPGW AG
Sbjct: 75 YKRYISPLLPQACRFFPTCSEYAIESVQKFGPAKGAVLTAWRLLRCNPLGGRGWDPPQWPPPGWKAG 141
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: W7TML8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TML8_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.460e-30 Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 1 YKKELSPLMPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAG 201
YK+ +SPL+P ACRF PTCS Y +E+++KFGP KGAVLTAWRL+RCNP G G D P+WPPPGW AG
Sbjct: 173 YKRYISPLLPQACRFFPTCSEYAIESVQKFGPAKGAVLTAWRLLRCNPLGGRGWDPPQWPPPGWKAG 239
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A7S0QB70_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QB70_9EUKA) HSP 1 Score: 114 bits (284), Expect = 2.850e-30 Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 1
Query: 1 YKKELSPLMPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAGEK 207
YK+ LSPL+PP CRF+PTCS Y +++ E+F P + AVLT WRL+RCNP AGYG+D P+WPPPG++AG +
Sbjct: 48 YKRALSPLLPPGCRFVPTCSEYAIQSFEQFSPVQAAVLTVWRLVRCNPTAGYGVDAPQWPPPGYWAGSQ 116
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: B8BR73_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR73_THAPS) HSP 1 Score: 108 bits (271), Expect = 1.120e-29 Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 1 YKKELSPLMPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAGE 204
YK+ +SPL+PPACRFLPTCS YGV+AIE+FGP+KG +LTAWRL RC+PF G G D P+WPP + G
Sbjct: 12 YKQWISPLLPPACRFLPTCSQYGVQAIEEFGPSKGVLLTAWRLARCSPFGGRGYDPPKWPPVAYNYGS 79
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A7S2R8H5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R8H5_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.630e-29 Identity = 45/61 (73.77%), Postives = 53/61 (86.89%), Query Frame = 1
Query: 1 YKKELSPLMPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPP 183
YK +SPL+PPACRFLPTCS YGV+AIE+FGP+KG VLTAWRL+RC+PF G G D P+WPP
Sbjct: 74 YKNVISPLLPPACRFLPTCSQYGVQAIEEFGPSKGVVLTAWRLLRCSPFGGKGYDPPKWPP 134
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A7S2ENE8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENE8_TRICV) HSP 1 Score: 112 bits (280), Expect = 4.470e-29 Identity = 46/61 (75.41%), Postives = 55/61 (90.16%), Query Frame = 1
Query: 1 YKKELSPLMPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPP 183
YK+ +SPL+PPACRF+PTCS YGV+AI++FGPTKGA+LTAWRLMRC+PF G G D PRWPP
Sbjct: 181 YKQFISPLLPPACRFVPTCSQYGVQAIQEFGPTKGAMLTAWRLMRCSPFGGKGYDPPRWPP 241
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A7S1XBZ4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XBZ4_9RHOD) HSP 1 Score: 107 bits (268), Expect = 9.280e-29 Identity = 43/68 (63.24%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 1 YKKELSPLMPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAGE 204
YK+++SPLMPP CRFLP+CS Y +EAI++FGP KG VLTAWR++RCNPF G G D P+WPP + +G
Sbjct: 49 YKEQISPLMPPNCRFLPSCSSYSIEAIQEFGPAKGLVLTAWRILRCNPFGGAGYDPPQWPPVHFRSGS 116 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70591.14717.1 >prot_H-elongata_contig70591.14717.1 ID=prot_H-elongata_contig70591.14717.1|Name=mRNA_H-elongata_contig70591.14717.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp MPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRback to top mRNA from alignment at H-elongata_contig70591:2367..2579- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70591.14717.1 ID=mRNA_H-elongata_contig70591.14717.1|Name=mRNA_H-elongata_contig70591.14717.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=213bp|location=Sequence derived from alignment at H-elongata_contig70591:2367..2579- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70591:2367..2579- >mRNA_H-elongata_contig70591.14717.1 ID=mRNA_H-elongata_contig70591.14717.1|Name=mRNA_H-elongata_contig70591.14717.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=378bp|location=Sequence derived from alignment at H-elongata_contig70591:2367..2579- (Himanthalia elongata Himel1 dioecious)back to top |