mRNA_H-elongata_contig7056.14710.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: D8LPY7_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY7_ECTSI) HSP 1 Score: 209 bits (532), Expect = 7.900e-60 Identity = 115/159 (72.33%), Postives = 125/159 (78.62%), Query Frame = 1
Query: 1 LVRLKAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGAL-------LMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERYQDDQ 456
L +LK++FSEPRSA +VDAVL FSLAARAGA KP S L+SVVGAKMSEGINFSDDLAR CVVMVGLPYPDKRD+ELKQKM+YLD +P SRGRAGREYYS+ICMRAVNQSIGRSIRHAGDYASILLVDERY+DDQ
Sbjct: 892 LSKLKSVFSEPRSAKDVDAVLREFSLAARAGAWKPTTSXXXXXXXXXXXXXXLLSVVGAKMSEGINFSDDLAR----------CVVMVGLPYPDKRDAELKQKMAYLDEASPSSRGRAGREYYSSICMRAVNQSIGRSIRHAGDYASILLVDERYKDDQ 1040
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A7S2RUD0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUD0_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.800e-40 Identity = 87/151 (57.62%), Postives = 99/151 (65.56%), Query Frame = 1
Query: 13 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRA-------GREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERY 444
K +F EPRS+ +VDAVL +S A A P GALL VVGAKMSEGINFSDDLAR CVVMVGLPYPD+ D EL+QKM++LD + G A G EYY N+CMRAVNQSIGR+IRH DYA+ILLVD RY
Sbjct: 351 KRVFREPRSSADVDAVLASYSQAI-ANCENPRPGSAVTGALLFCVVGAKMSEGINFSDDLAR----------CVVMVGLPYPDRSDPELQQKMAFLDSRPRGASGAAASPAQSAGSEYYENLCMRAVNQSIGRAIRHINDYAAILLVDHRY 490
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A835YWY4_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY4_9STRA) HSP 1 Score: 152 bits (384), Expect = 8.250e-40 Identity = 84/148 (56.76%), Postives = 100/148 (67.57%), Query Frame = 1
Query: 1 LVRLKAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERY 444
L + KAIFSEPR+ATEV+++L +S A + L+SVVGAKMSEGINFSDDLAR CVVMVG+P+PD RD EL+QK+ Y D +P GRAGR Y +CMRAVNQSIGR IRHA DY ++LLVDERY
Sbjct: 833 LSKRKAIFSEPRAATEVESILAAYSAAIHRSSGXXXXXXXX--XXLLSVVGAKMSEGINFSDDLAR----------CVVMVGMPFPDARDPELRQKIEYADAADPAGGGRAGRALYQAMCMRAVNQSIGRCIRHARDYGAVLLVDERY 968
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A2P4XDU4_9STRA (ATP-dependent RNA helicase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XDU4_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.330e-39 Identity = 78/144 (54.17%), Postives = 104/144 (72.22%), Query Frame = 1
Query: 13 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERY 444
K+IFSEP+ + E+ VL +S A + +++G G A+L+SVVG KMSEGINFSDDLAR CVVMVG+PYP+ RD+EL +KM++LD+ +P S GR++Y ++CM+AVNQSIGRSIRH DY++ILLVD RY
Sbjct: 133 KSIFSEPKKSDELAEVLTQYSAACS----RDNRNGSG--AMLLSVVGGKMSEGINFSDDLAR----------CVVMVGMPYPNARDAELVEKMAFLDKRSPGS----GRQFYESLCMKAVNQSIGRSIRHQKDYSTILLVDHRY 256
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A835GGN0_SPOEX (HELICc2 domain-containing protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=A0A835GGN0_SPOEX) HSP 1 Score: 145 bits (365), Expect = 2.880e-39 Identity = 76/148 (51.35%), Postives = 103/148 (69.59%), Query Frame = 1
Query: 1 LVRLKAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERY 444
+ + KAIF EP+SA++VD VL+ F+ A + +K G GALL+SVVG K+SEG+NFSDDL R CV++VG+PYP+ + EL++KM+YL N + G AG YY N+CM+AVNQ IGR++RHA DY+ +LLVDERY
Sbjct: 188 ITKKKAIFREPKSASDVDQVLNKFASAVK------NKDGDHNGALLLSVVGGKLSEGLNFSDDLGR----------CVMVVGMPYPNVKSPELQEKMNYL---NKTAGGSAGNIYYENLCMKAVNQCIGRAVRHANDYSCVLLVDERY 316
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A5D6Y0V7_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0V7_9STRA) HSP 1 Score: 150 bits (379), Expect = 3.780e-39 Identity = 84/156 (53.85%), Postives = 105/156 (67.31%), Query Frame = 1
Query: 13 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGG------------ALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERY 444
K +F EP+ + E+ +VL +S A R + + SGGGGG A+L+SVVG KMSEGINFSD+LAR CVVMVGLPYP+ RD+EL +KM++LDR +P AGR YY ++CM+AVNQSIGRSIRH DYASI+LVD RY
Sbjct: 739 KKVFREPKQSDELASVLAQYSAACRPLPERGNSSGGGGGLAYERAGGASRGAVLLSVVGGKMSEGINFSDELAR----------CVVMVGLPYPNARDAELVEKMAFLDRRSPG----AGRRYYESLCMKAVNQSIGRSIRHQKDYASIVLVDHRY 880
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A6J1WPV9_GALME (ATP-dependent DNA helicase DDX11-like n=1 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J1WPV9_GALME) HSP 1 Score: 139 bits (350), Expect = 2.530e-38 Identity = 73/144 (50.69%), Postives = 97/144 (67.36%), Query Frame = 1
Query: 13 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERY 444
K +F EP+SA +VD VL ++ A + +K G GAL++SVVG K+SEG+NFSDDL R CV++VG+PYP+ + ELK+KM YLDRM + AG YY N+CM+AVNQ IGR++RH DYA +LL+DERY
Sbjct: 57 KCVFREPKSAADVDQVLSKYAKAVQ------NKQGCSTGALMLSVVGGKLSEGLNFSDDLGR----------CVIVVGMPYPNIKSPELKEKMKYLDRMVSPN---AGHIYYENLCMKAVNQCIGRAVRHIDDYACVLLLDERY 181
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A3F2S1D7_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1D7_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.610e-38 Identity = 80/148 (54.05%), Postives = 102/148 (68.92%), Query Frame = 1
Query: 13 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERYQDDQ 456
KA+FSEP+ + E+ VL +S A G G GA+L SVVG KMSEGINFSD+LAR CVVMVG+PYP+ RD+EL +KM++LD+ NP S G ++Y ++CM+AVNQSIGR+IRH DYASILLVD+RY + Q
Sbjct: 463 KAVFSEPKKSGELADVLAQYSAACSRGNRD------GSGAILFSVVGGKMSEGINFSDELAR----------CVVMVGMPYPNARDAELVEKMAFLDKRNPGS----GHQFYESLCMKAVNQSIGRAIRHQKDYASILLVDQRYSNPQ 590
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: UPI0018901F6C (ATP-dependent DNA helicase DDX11 n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI0018901F6C) HSP 1 Score: 146 bits (368), Expect = 4.370e-38 Identity = 77/148 (52.03%), Postives = 99/148 (66.89%), Query Frame = 1
Query: 13 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERYQDDQ 456
K +F EP+SA+EVD VL+ F+ A R +K G GALL SVVG K+SEG+NFSDDL R CV+++G+PYP+ + EL++KMSYL+R AG YY N+CM+AVNQ IGR++RHA DYA +LLVDERY Q
Sbjct: 449 KCVFREPKSASEVDQVLNKFASAVR------NKDGARNGALLFSVVGGKLSEGLNFSDDLGR----------CVIVIGMPYPNIKSPELQEKMSYLNRTEGSG---AGNTYYENLCMKAVNQCIGRAVRHANDYACVLLVDERYSRQQ 577
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A194PF05_PAPXU (Putative ATP-dependent RNA helicase DDX11-like protein 8 n=4 Tax=Papilio TaxID=7145 RepID=A0A194PF05_PAPXU) HSP 1 Score: 147 bits (370), Expect = 5.970e-38 Identity = 79/150 (52.67%), Postives = 101/150 (67.33%), Query Frame = 1
Query: 13 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERYQDDQAS 462
K IF EP+SATEV+ VL F+ A R K G GALL+SVVG K+SEG+NFSDDL R CV+++G+PYP+ + EL++KM+YL+R S AG +YY N+CM+AVNQ IGR++RHA DYA ILLVDERY Q +
Sbjct: 701 KTIFREPKSATEVEQVLQKFTTAVR-------KKGDRNGALLLSVVGGKLSEGLNFSDDLGR----------CVIVIGMPYPNVKSPELQEKMNYLNRTVGSS---AGSQYYENLCMKAVNQCIGRAVRHANDYACILLVDERYSRTQTT 830 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7056.14710.1 >prot_H-elongata_contig7056.14710.1 ID=prot_H-elongata_contig7056.14710.1|Name=mRNA_H-elongata_contig7056.14710.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp LVRLKAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVback to top mRNA from alignment at H-elongata_contig7056:8802..10173- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7056.14710.1 ID=mRNA_H-elongata_contig7056.14710.1|Name=mRNA_H-elongata_contig7056.14710.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1372bp|location=Sequence derived from alignment at H-elongata_contig7056:8802..10173- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7056:8802..10173- >mRNA_H-elongata_contig7056.14710.1 ID=mRNA_H-elongata_contig7056.14710.1|Name=mRNA_H-elongata_contig7056.14710.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=942bp|location=Sequence derived from alignment at H-elongata_contig7056:8802..10173- (Himanthalia elongata Himel1 dioecious)back to top |