prot_H-elongata_contig7056.14710.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7056.14710.1
Unique Nameprot_H-elongata_contig7056.14710.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length157
Homology
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: D8LPY7_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY7_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 7.900e-60
Identity = 115/159 (72.33%), Postives = 125/159 (78.62%), Query Frame = 0
Query:    1 LVRLKAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGAL-------LMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERYQDDQ 152
            L +LK++FSEPRSA +VDAVL  FSLAARAGA KP  S              L+SVVGAKMSEGINFSDDLAR          CVVMVGLPYPDKRD+ELKQKM+YLD  +P SRGRAGREYYS+ICMRAVNQSIGRSIRHAGDYASILLVDERY+DDQ
Sbjct:  892 LSKLKSVFSEPRSAKDVDAVLREFSLAARAGAWKPTTSXXXXXXXXXXXXXXLLSVVGAKMSEGINFSDDLAR----------CVVMVGLPYPDKRDAELKQKMAYLDEASPSSRGRAGREYYSSICMRAVNQSIGRSIRHAGDYASILLVDERYKDDQ 1040          
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A7S2RUD0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUD0_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.800e-40
Identity = 87/151 (57.62%), Postives = 99/151 (65.56%), Query Frame = 0
Query:    5 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRA-------GREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERY 148
            K +F EPRS+ +VDAVL  +S A  A    P       GALL  VVGAKMSEGINFSDDLAR          CVVMVGLPYPD+ D EL+QKM++LD     + G A       G EYY N+CMRAVNQSIGR+IRH  DYA+ILLVD RY
Sbjct:  351 KRVFREPRSSADVDAVLASYSQAI-ANCENPRPGSAVTGALLFCVVGAKMSEGINFSDDLAR----------CVVMVGLPYPDRSDPELQQKMAFLDSRPRGASGAAASPAQSAGSEYYENLCMRAVNQSIGRAIRHINDYAAILLVDHRY 490          
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A835YWY4_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY4_9STRA)

HSP 1 Score: 152 bits (384), Expect = 8.250e-40
Identity = 84/148 (56.76%), Postives = 100/148 (67.57%), Query Frame = 0
Query:    1 LVRLKAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERY 148
            L + KAIFSEPR+ATEV+++L  +S A    +             L+SVVGAKMSEGINFSDDLAR          CVVMVG+P+PD RD EL+QK+ Y D  +P   GRAGR  Y  +CMRAVNQSIGR IRHA DY ++LLVDERY
Sbjct:  833 LSKRKAIFSEPRAATEVESILAAYSAAIHRSSGXXXXXXXX--XXLLSVVGAKMSEGINFSDDLAR----------CVVMVGMPFPDARDPELRQKIEYADAADPAGGGRAGRALYQAMCMRAVNQSIGRCIRHARDYGAVLLVDERY 968          
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A2P4XDU4_9STRA (ATP-dependent RNA helicase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XDU4_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.330e-39
Identity = 78/144 (54.17%), Postives = 104/144 (72.22%), Query Frame = 0
Query:    5 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERY 148
            K+IFSEP+ + E+  VL  +S A      + +++G G  A+L+SVVG KMSEGINFSDDLAR          CVVMVG+PYP+ RD+EL +KM++LD+ +P S    GR++Y ++CM+AVNQSIGRSIRH  DY++ILLVD RY
Sbjct:  133 KSIFSEPKKSDELAEVLTQYSAACS----RDNRNGSG--AMLLSVVGGKMSEGINFSDDLAR----------CVVMVGMPYPNARDAELVEKMAFLDKRSPGS----GRQFYESLCMKAVNQSIGRSIRHQKDYSTILLVDHRY 256          
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A835GGN0_SPOEX (HELICc2 domain-containing protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=A0A835GGN0_SPOEX)

HSP 1 Score: 145 bits (365), Expect = 2.880e-39
Identity = 76/148 (51.35%), Postives = 103/148 (69.59%), Query Frame = 0
Query:    1 LVRLKAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERY 148
            + + KAIF EP+SA++VD VL+ F+ A +      +K G   GALL+SVVG K+SEG+NFSDDL R          CV++VG+PYP+ +  EL++KM+YL   N  + G AG  YY N+CM+AVNQ IGR++RHA DY+ +LLVDERY
Sbjct:  188 ITKKKAIFREPKSASDVDQVLNKFASAVK------NKDGDHNGALLLSVVGGKLSEGLNFSDDLGR----------CVMVVGMPYPNVKSPELQEKMNYL---NKTAGGSAGNIYYENLCMKAVNQCIGRAVRHANDYSCVLLVDERY 316          
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A5D6Y0V7_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0V7_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.780e-39
Identity = 84/156 (53.85%), Postives = 105/156 (67.31%), Query Frame = 0
Query:    5 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGG------------ALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERY 148
            K +F EP+ + E+ +VL  +S A R    + + SGGGGG            A+L+SVVG KMSEGINFSD+LAR          CVVMVGLPYP+ RD+EL +KM++LDR +P     AGR YY ++CM+AVNQSIGRSIRH  DYASI+LVD RY
Sbjct:  739 KKVFREPKQSDELASVLAQYSAACRPLPERGNSSGGGGGLAYERAGGASRGAVLLSVVGGKMSEGINFSDELAR----------CVVMVGLPYPNARDAELVEKMAFLDRRSPG----AGRRYYESLCMKAVNQSIGRSIRHQKDYASIVLVDHRY 880          
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A6J1WPV9_GALME (ATP-dependent DNA helicase DDX11-like n=1 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J1WPV9_GALME)

HSP 1 Score: 139 bits (350), Expect = 2.530e-38
Identity = 73/144 (50.69%), Postives = 97/144 (67.36%), Query Frame = 0
Query:    5 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERY 148
            K +F EP+SA +VD VL  ++ A +      +K G   GAL++SVVG K+SEG+NFSDDL R          CV++VG+PYP+ +  ELK+KM YLDRM   +   AG  YY N+CM+AVNQ IGR++RH  DYA +LL+DERY
Sbjct:   57 KCVFREPKSAADVDQVLSKYAKAVQ------NKQGCSTGALMLSVVGGKLSEGLNFSDDLGR----------CVIVVGMPYPNIKSPELKEKMKYLDRMVSPN---AGHIYYENLCMKAVNQCIGRAVRHIDDYACVLLLDERY 181          
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A3F2S1D7_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1D7_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.610e-38
Identity = 80/148 (54.05%), Postives = 102/148 (68.92%), Query Frame = 0
Query:    5 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERYQDDQ 152
            KA+FSEP+ + E+  VL  +S A   G         G GA+L SVVG KMSEGINFSD+LAR          CVVMVG+PYP+ RD+EL +KM++LD+ NP S    G ++Y ++CM+AVNQSIGR+IRH  DYASILLVD+RY + Q
Sbjct:  463 KAVFSEPKKSGELADVLAQYSAACSRGNRD------GSGAILFSVVGGKMSEGINFSDELAR----------CVVMVGMPYPNARDAELVEKMAFLDKRNPGS----GHQFYESLCMKAVNQSIGRAIRHQKDYASILLVDQRYSNPQ 590          
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: UPI0018901F6C (ATP-dependent DNA helicase DDX11 n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI0018901F6C)

HSP 1 Score: 146 bits (368), Expect = 4.370e-38
Identity = 77/148 (52.03%), Postives = 99/148 (66.89%), Query Frame = 0
Query:    5 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERYQDDQ 152
            K +F EP+SA+EVD VL+ F+ A R      +K G   GALL SVVG K+SEG+NFSDDL R          CV+++G+PYP+ +  EL++KMSYL+R        AG  YY N+CM+AVNQ IGR++RHA DYA +LLVDERY   Q
Sbjct:  449 KCVFREPKSASEVDQVLNKFASAVR------NKDGARNGALLFSVVGGKLSEGLNFSDDLGR----------CVIVIGMPYPNIKSPELQEKMSYLNRTEGSG---AGNTYYENLCMKAVNQCIGRAVRHANDYACVLLVDERYSRQQ 577          
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Match: A0A194PF05_PAPXU (Putative ATP-dependent RNA helicase DDX11-like protein 8 n=4 Tax=Papilio TaxID=7145 RepID=A0A194PF05_PAPXU)

HSP 1 Score: 147 bits (370), Expect = 5.970e-38
Identity = 79/150 (52.67%), Postives = 101/150 (67.33%), Query Frame = 0
Query:    5 KAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVVGAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYLDRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERYQDDQAS 154
            K IF EP+SATEV+ VL  F+ A R       K G   GALL+SVVG K+SEG+NFSDDL R          CV+++G+PYP+ +  EL++KM+YL+R    S   AG +YY N+CM+AVNQ IGR++RHA DYA ILLVDERY   Q +
Sbjct:  701 KTIFREPKSATEVEQVLQKFTTAVR-------KKGDRNGALLLSVVGGKLSEGLNFSDDLGR----------CVIVIGMPYPNVKSPELQEKMNYLNRTVGSS---AGSQYYENLCMKAVNQCIGRAVRHANDYACILLVDERYSRTQTT 830          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7056.14710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPY7_ECTSI7.900e-6072.33Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S2RUD0_9STRA1.800e-4057.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YWY4_9STRA8.250e-4056.76Helicase C-terminal domain-containing protein n=1 ... [more]
A0A2P4XDU4_9STRA2.330e-3954.17ATP-dependent RNA helicase n=1 Tax=Phytophthora pa... [more]
A0A835GGN0_SPOEX2.880e-3951.35HELICc2 domain-containing protein n=1 Tax=Spodopte... [more]
A0A5D6Y0V7_9STRA3.780e-3953.85Helicase ATP-binding domain-containing protein n=1... [more]
A0A6J1WPV9_GALME2.530e-3850.69ATP-dependent DNA helicase DDX11-like n=1 Tax=Gall... [more]
A0A3F2S1D7_9STRA3.610e-3854.05Helicase ATP-binding domain-containing protein n=1... [more]
UPI0018901F6C4.370e-3852.03ATP-dependent DNA helicase DDX11 n=1 Tax=Manduca s... [more]
A0A194PF05_PAPXU5.970e-3852.67Putative ATP-dependent RNA helicase DDX11-like pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006555ATP-dependent helicase, C-terminalSMARTSM00491Cxpdneu3coord: 1..150
e-value: 3.1E-33
score: 126.4
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 6..152
e-value: 1.3E-33
score: 116.5
NoneNo IPR availableGENE3D3.40.50.300coord: 5..155
e-value: 7.1E-40
score: 138.5
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 5..151
IPR028331ATP-dependent RNA helicase CHL1/DDX11PANTHERPTHR11472:SF41ATP-DEPENDENT DNA HELICASE DDX11-RELATEDcoord: 5..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7056contigH-elongata_contig7056:8802..10173 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7056.14710.1mRNA_H-elongata_contig7056.14710.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7056 8802..10173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7056.14710.1 ID=prot_H-elongata_contig7056.14710.1|Name=mRNA_H-elongata_contig7056.14710.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
LVRLKAIFSEPRSATEVDAVLHGFSLAARAGAHKPDKSGGGGGALLMSVV
GAKMSEGINFSDDLARRGETKRDLSVCVVMVGLPYPDKRDSELKQKMSYL
DRMNPDSRGRAGREYYSNICMRAVNQSIGRSIRHAGDYASILLVDERYQD
DQASEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006555ATP-dep_Helicase_C
IPR028331CHL1/DDX11