mRNA_H-elongata_contig704.14697.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 418 bits (1074), Expect = 3.960e-138 Identity = 227/452 (50.22%), Postives = 296/452 (65.49%), Query Frame = 1
Query: 1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKN---------------------CLYVYIYEDETGFAI-LTLYVDDILLLS----ASKTLLN---------------------------------KLKKKLMNRTITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 1179
+V QG++Q+PG+DCG T+APVCR QS+RM+ I E + +DV TAFL A+ +E+VFV+ PG+E DK G +VMKL KSLYGL QS N C+Y+Y D G I LTLYVDD+LL A K LL+ K+++ T+TISQ+ Y + +++R+GM P TPG G E+S QPE+ LL+E+E R+YQ I G++MY+AQV RYDI+YA QLAR+M+KP+K HM AKH L YLAG+ DFSIT K+GGF+LA FSD+NW N+P +G+STSSY+ +LANAP+SF+ GL+GLTA ST+EAELVA+AL MKEAV CSNM+ EL + F +P+Y DNT+ LH GNR++ R KHIALR+FF++EL EGKISIHYV T+D LAD+GTKH +K
Sbjct: 195 VVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLY---DHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNK 643
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 422 bits (1084), Expect = 3.720e-131 Identity = 224/439 (51.03%), Postives = 292/439 (66.51%), Query Frame = 1
Query: 1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKN---------------------CLYVYIYEDETGFAI-LTLYVDDILLLSASKTLLNKLKKKLMNR------------------------TITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 1179
+V QG++Q+PG+DCG T+APVCR QS+RM+ I E + +DV TAFL A+ +E+VFV+ PG+E DK G +VMKL KSLYGL QS N C+Y+Y D G I LTLYVDD+LL ++ +K KL R T+TISQ+ Y + +++R+G+ P TPG G E+S QPE+ LL+E+E R+YQ I G++MY+AQV RYDI+YA QLAR M+KP+K HM AKH L YLAG+ DFSIT K+GGF+LA FSD+NW N+P +G+STSSY+ +LANAP+SF+ GL+GLTA ST+EAELVA+AL M EAV SNM+ EL F + F +P+Y DNT+ LH GNR++ R KHIALR+FF++EL EGKISIHYV T+D LAD+GTKH +K
Sbjct: 1216 VVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLY---DHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNK 1651
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE) HSP 1 Score: 399 bits (1025), Expect = 2.050e-129 Identity = 212/412 (51.46%), Postives = 281/412 (68.20%), Query Frame = 1
Query: 1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKNCLY-------------------VYIYEDETGFAILTLYVDDILLLSASKTLLNKLKKKLMNRTITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 1179
LV +G++Q+PG DCGGTFAPVCR QSIRM+ AI E D +V LDV+TAFL A+ EE+VFV++ PGYE + + LVMKL+KSL GL QS ++ L VYIY+ +LTLYVDD+L++ +YT ++ R+GM S P T G GPELS+ QPEE LLN E K+RYQAI G+VMYLAQVTRYDI+Y +Q ARAMS P+K HMG AKHLL YL+GS DFSIT K+GGF L S+AN ++ +G+S SSYI++++ AP S K GL+ LTA ST+EAELVA+AL MKE + C+NM+ EL F F S PL+ID+T+ L+V GN+T+ KH+ALR+F+++++ +EG+ISIHY+ T+D LAD+GT++L+K
Sbjct: 367 LVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDTCVYIYDHNNTVVVLTLYVDDLLIIRGGAH---------------HQPGNYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNK 763
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE) HSP 1 Score: 375 bits (962), Expect = 3.850e-124 Identity = 207/409 (50.61%), Postives = 266/409 (65.04%), Query Frame = 1
Query: 94 AIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKS-GVPLVMKLKKSLYGLRQSAKN---------------------CLYVYIYEDETGFAI-LTLYVDDILLLSASKTLLNKLKKKLMNR------------------------TITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 1179
A E + +DV TAFL A+ +E+VFV+ PG+E DK G +VMKL KSLYGL QS N C+Y+Y D G I LTLYVDD+LL ++ +K KL R T+TISQ+ Y + +++R+GM P TPG G E+S QPE+ LL+E+E R+YQ I G++MY+AQV RYDI+YA QLAR M+KP+K HM AKH L YLAG+ DFSIT K+GGF+LA FSD+NW N+P +G+STSSY+ +LANAP+SF+ GL+GLTA ST+EAELVA+AL MKEAV CSNM+ EL F + F +P+Y DNT+ LH GNR++ R KHIALR+FF++EL EGKISIHY T+D LAD+GTKH +K
Sbjct: 17 APTVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKEDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVIVEIGFVALKSDPCVYLY---DHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNK 422
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE) HSP 1 Score: 383 bits (983), Expect = 7.600e-121 Identity = 210/438 (47.95%), Postives = 274/438 (62.56%), Query Frame = 1
Query: 1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKN---------------------CLYVYIYEDETGFAI-LTLYVDDILLLSASKTLLNKLKKKLMNR------------------------TITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLS 1176
+V QG++Q+PG+DCG T+APVCR QS+RM+ I + + +D G +VMKL KSLYGL QS N C+Y+Y D G I LTLYVDD+LL ++ +K KL R T+TISQ+ Y + +++R+GM P TPG G E+S QPE+ LL+E+E R+YQ I G++MY+AQV RYDI+YA QLAR M+KP+K HM AKH L YLAG+ DFSIT K+GGF+LA FSD+NW N+P +G+STSSY+ +LANAP+SF+ GL+GLTA ST+EAELVA+AL MKEAV CSNM+ EL F + F +P+Y DNT+ LH GNR++ R KHIALR+FF++EL EGKISIHYV+T+D LAD+GTKH +
Sbjct: 574 VVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMD---------------------------DGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLY---DHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFN 981
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE) HSP 1 Score: 348 bits (894), Expect = 3.080e-110 Identity = 186/396 (46.97%), Postives = 257/396 (64.90%), Query Frame = 1
Query: 73 QSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKNCLY-------------------VYIYEDETGFAILTLYVDDILLLSASKTLLN--------KLKKKLMNRTITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 1179
QS+R++L I E D + +DV AFL A+ +EDV+V+ PG+E ++G LVM L+KSLY L QS N + VY Y+ + LTL VDD+LL + L+ ++K+ T++IS++ Y++ ++ R+GM + P TPG+GP S QPEE LLN+EE RRYQ I G ++YL+Q+ RYDI+YA +QLAR M+KP+K HMG AK YLAG+ F I K+GGF+L F+D+NW N+P +G+STSS++ +L +AP++FK GL+ LT ST+E ELVAAAL +KEAV CSN++ EL F + VPLY DNT+ LH GNR+Y KHIALR+FF++EL EG+I+IHYV AD+GTKHL+K
Sbjct: 310 QSVRVLLCITVEFDLIIVQMDVTAAFLYADIQEDVYVEQPPGFEVKGENGEDLVMLLQKSLYWLAQSPGNWFHTIDPFLISIGFVPLKPDPCVYFYDHDGSQMYLTLSVDDLLLAGNNSDALSIASLISGMEIKRDRERGTLSISREAYSKSILDRFGMSACKPTSTPGLGPGPSNVQPEETLLNQEETRRYQGIVGCLIYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNK 705
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE) HSP 1 Score: 321 bits (822), Expect = 1.120e-99 Identity = 187/439 (42.60%), Postives = 263/439 (59.91%), Query Frame = 1
Query: 1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKS-GVPLVMKLKKSLYGLRQS---------------------AKNCLYVYIYEDETGFAILTLYVDDILLLSASKTLLNKLKKKLMNR------------------------TITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 1179
LV G Q G G +APV R SIRM+ AI E +EV+ LDV AFLNA + DV+V+ PG E D + G +V KL+KSLYGL QS + C+Y+++ DE IL +YVDDIL+ +K ++++ KK+LM+ T+ ISQ Y D++QRYGM+ NP TPG G ELS QP+++LL E+K+R+QAITG+++YLAQ TRYD+ YAV+QL RA + PA+ HM AKHLL YL G+ D I K+G FRL+ F+D+++ +P +GRST+ Y+ L IS+ + L A +T+EAEL A + + +EAV SN + E+ F ++F SVP+ D+T AL VA N + R KHIALR+FF++EL + +I++H+ + LAD+ TKHL K
Sbjct: 284 LVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDE--LTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGF-KTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPK 719
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE) HSP 1 Score: 326 bits (835), Expect = 3.130e-98 Identity = 188/457 (41.14%), Postives = 267/457 (58.42%), Query Frame = 1
Query: 1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKNCLY-VYIYEDETGFAILT----LYVDDILLLSASKTLLNKLKKKLMNR-TITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLAR-----------------------AMSKPAKAHMGVAK-----------------------------------HLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 1179
LV QG++Q+PG+ CG T+APVCR QSIRM+ I + + E+ +DV TAFL + E+VFV+ PG+E +K G LVM+L++SLYGL QS N + + + E GF L +Y+ + + K +L KK NR T+TISQ+ Y++ +++R+GM P TPG G ELS QPE+ LL+EEE RRYQ I G +MY+AQV RYD+++ + + A SK G+++ L Y+A + + G +LA FS++NW N+P +G+S+S Y+ +L NAP+SFK G++G TA ST+EAEL+A+AL MKEAV CSN++ EL + F VPLY DNT+ LH GNR++ R KHIALR+F+++EL EG+ISIHY+ T +AD+GTKHL+K
Sbjct: 700 LVAQGWNQVPGLGCGSTYAPVCRLQSIRMLACIAVQFNLELDQIDVFTAFLYVDILENVFVEQPPGFEVKNKDGGDLVMQLQESLYGLAQSPSNWFHTIDPFLVEIGFVSLKSDTCVYLFKMTNMGEVKLVLGMDIKKDCNRGTLTISQEAYSKSILERFGMSECKPISTPGYGSELSNKQPEDTLLDEEETRRYQGIVGCLMYIAQVLRYDVMFKMTNMGEVKLVLGMDIKKDCNRGTLTISQEAYSKSILERFGMSECKPISTPGYGSELSNKQPEDTLLDEEETRRYQGIVGCLMYIAQVLRYDVI----GSKLATFSESNWANNPDNGKSSSCYLTMLGNAPVSFKSGIQGPTAMSTMEAELIASALAMKEAVFCSNILTELGLGKEFAQVPLYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTKHLNK 1152
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE) HSP 1 Score: 303 bits (776), Expect = 2.800e-96 Identity = 162/320 (50.62%), Postives = 220/320 (68.75%), Query Frame = 1
Query: 1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKNCLYV---YIYEDET--GFAILTLYVDDILLLSASKTLLN-KLKKKLMNRTITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVV 942
LV QG++Q+PG+DCG T+APVCR QSIRM+ IV + + E+ +DV TAF A+ E+VFV+ PG+E DK G LVM+L+KSLYGL Q A N + ++ E+ + + +Y+ + + K +L ++K+ T+TISQK YT+ +++R+GM P TPG G ELS QPE+ LL EEE RRYQ I G +MY+AQV RYDI+YA QLAR M KP+K HM AKH L Y+AG+ +F IT K GF+LA FSD+NW N+P +G+STS Y+ +L N P+S K G++G TA ST+EAEL+A+AL MKEAV+
Sbjct: 115 LVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIVVQFNLELDQMDVSTAFFYADILENVFVERPPGFEVKDKDGGDLVMQLQKSLYGLAQIASNWFHTIDPFLVENISVPRKSDTCVYLFKMTDMGEVKLVLGMEIKRDHNQGTLTISQKAYTKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLGEEETRRYQGIVGCLMYIAQVLRYDIMYATGQLARPMEKPSKIHMVAAKHTLRYVAGTTNFRITYKSEGFKLATFSDSNWANNPDNGKSTSCYLTMLGNTPVSLKSGIQGPTAMSTMEAELIASALAMKEAVL 434
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE) HSP 1 Score: 314 bits (804), Expect = 9.490e-95 Identity = 181/392 (46.17%), Postives = 229/392 (58.42%), Query Frame = 1
Query: 4 VVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKNCLYVYIYEDETGFAILTLYVDDILLLSASKTLLNKLKKKLMNRTITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 1179
V ++Q+PG D GGTFAPVCR QSIRM+LAI E D +V LDV+TAFL A+ EED G TN SQ++Y ++ R+GM S P T G GPELS AI G+V+YLAQ+TRYDI+Y +QLARAMS P+K HMG AKHLL YL+GS DFSIT K+GGF L SDANW N+P + +S SSYI++++ AP+SFK GL+ LTA ST+EAELVAAAL MKE + C+NM+ EL F F S PLYI NT+ LHV GN+T+ R KH+ALR+F+++E+ +EG+ISIHY+ T+D LAD+GTKHL+K
Sbjct: 381 VTGRWNQVPGRDWGGTFAPVCRLQSIRMLLAIAAEKDLDVIQLDVKTAFLYADIEED-------GELTN-----------------------------------------------------------------------SQENYPNSILDRFGMGSWKPLSTAGFGPELS------------------AIIGSVIYLAQITRYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNK 675 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig704.14697.1 >prot_H-elongata_contig704.14697.1 ID=prot_H-elongata_contig704.14697.1|Name=mRNA_H-elongata_contig704.14697.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=393bp LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFback to top mRNA from alignment at H-elongata_contig704:569..1871- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig704.14697.1 ID=mRNA_H-elongata_contig704.14697.1|Name=mRNA_H-elongata_contig704.14697.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1303bp|location=Sequence derived from alignment at H-elongata_contig704:569..1871- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig704:569..1871- >mRNA_H-elongata_contig704.14697.1 ID=mRNA_H-elongata_contig704.14697.1|Name=mRNA_H-elongata_contig704.14697.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2358bp|location=Sequence derived from alignment at H-elongata_contig704:569..1871- (Himanthalia elongata Himel1 dioecious)back to top |